Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         <---------------AGL15                       --------------->AGL15                 --------->AHL20(1)                 <---------ICU4                 <---------ARR11(3)                 --------->ARR11(3)                 <---------AHL20(1)               <---------AHL20(1)             <---------YAB1  <---------TOE2(3)                                                      -            --------->AHL20(2)                                                            --------->DAG2            --------->AHL20(1)                                                            <----------            <---------AHL20(2)                                                            <----------           --------->YAB1    <---------TOE1(3)                       <----------DOF2      ----------- ------AHL20(2)<---------AHL20(2)       ---------->DOF2    --------->ANAC46              ---------->DOF2 ---->AHL20(2)--------->YAB1 <---------YAB1  <---------YAB1--------->ANAC58           --------->YAB1- -YAB1    --------->ICU4  <---------ATHB51 --------->YAB1  --------->ANAC58          <---------ATHB12   ttatatgtagaaattataatattttcaaattatggttgaaaacaaagatgattttcttagcaagccataagcttttcttatatgcaaatgataaagtact  14897000      <---------AHL20(1) -------->ANAC46                   <---------CCA1(2) -----AtSPL3                    <------ZmHOX2a(2)             <---------ARR14(2) -----AtSPL8                   --------->ARR11(3)        ----------->HVH21               --------->AtLEC2 ---->AtSPL8                   <---------ARR11(3)        ----------->TGA1             <---------ATHB12 -------->ANAC55(2)   <---------ANAC55(1)         <---------GLK1(2)         <-----------GT1   tcacataatatgtttccctagattacgagttaagatcatatcgttgaatatagaattttgtgacgatactaacttgttttactatgaaatcatgcacaat  14897100                        --------->ANAC46                        --------->ANAC58                        <---------ANAC55(2)                        --------->ANAC55(2)                        --------->ANAC58             --------->ICU4          ------->MYC3      --------->AHL20(2)             <---------YAB1          <-------MYC3      <---------AHL20(2)--------->TOE2(2)           --------->YAB1     --------->YAB1    <---------AHL20(2)       --------->TOE1(2)        --------->GLK1(1)    --------->ICU4<---------YAB1               ----------->RAV1(2) ----------->HVH21     <---------LBD16     --------->ICU4              -------->P  ----------->GT1   tttgtgacagaattcatgattttgctacggaatcatcaacgtgttatgattttttttttaaatgatatgttcttacctgagaataatgtgaattggattt  14897200                                                     --------->ANAC46                                                   <-----------GT1                                             ------>ZmHOX2a(2)                                           --------->ARR11(3)                                           <---------ARR14(3)                                           --------->ARR14(3)                                           <---------ARR11(3)                  --------->YAB1           <---------AGP1                 <---------YAB1            <-----------ARR10               --------->YAB1              <---------ARR14(2)            ------>MYB83                   --------->ARR14(2)         --------->TOE2(3)             <            ------>MYB46(1)  <----------DOF2<------ZmHOX2a(2)         --------->ANAC55(2)           <       <----------ID1  --------->ZAT6  ---------->DOF2         <---------YAB1  ------------>CBF <----   atactaaaaacaccaaattataagaacagtacttttgcgaacaaagatcttattcacaaaaccatatgatatacttaatgggccaataccaggcctgaga  14897300                                                                                                   <-          <---------MYB52(1)                                                                       --   --------->MYB52(1)                                      --------->ANAC46                        <- <---------MYB46(2)                                        --------->ANAC58                    <----- <---------MYB59                  ---------->DOF2          *TSS                             <-------- ---------ANAC58               --------->ZAT2   <------NtERF2                               <-------- ---------ANAC58          <-----------GT1     <---------DEAR3(1)    <---------WRKY18(1)     --------- --------CBF----------->GT1    --------->At4g35610         --------->ANAC58  <<<<<<<<<TBF1  ---------   ttgcctaacgtcgttagtaaaacccgtttaaccagctaaagtataacgtcgtcgtttaaacaaggcatcttgacccttcttcttctctatcgagtgctct  14897400   <---------YAB1 --------ARR14(2) ------->ARR14(2)                                                                         --------->TOE1(2) --------GLK1(2)            --------->ARR14(2)                                         <---------ARR14(2) ----LBD16            --------->ANAC58                                  --------->ANAC58  --------->TOE2(3) -ZAT18               --------->ANAC58                                  --------->ANAC46  --------->TOE1(3) -ZAT14             ---------->DOF2                                     --------->ANAC58------->TEIL >ZAT14            <------ZmHOX2a(1)<------ZmHOX2a(2)           <----------DOF2  --------->HSFB2a(2) >ZAT18            ========================HOX2a_HOX2a  --------->GLK1(1)        <---------HSFB2a(2)   ggattctgatttgatttgtgaggaaagctagatcgacgatcgaataagtctcgcgctgaaatctatctttgtgcaagcaaactctcgaagaaccttagat  14897500                                          ------>ZmHOX2a(1)                                        ------>ZmHOX2a(2)                                      --------->ARR11(3)                                      --------->ARR14(3)                                      <---------ARR14(3)                                      <---------ARR11(3)                                  --------->ANAC46                                      --------->ARR14(2)                                 <---------LBD16                                      --------->AGP1                                    --------->MYB52(1)                                      <---------GLK1(2)          <------NtERF2         ------->GAMYB                                      <---------ARR14(2)    --------->ANAC58          --------->MYB46(3)                                     --------->GLK1(1)    ---------->DOF2             --------->DEAR3(2)                    <---------ANAC55(2)<------ZmHOX2a(2) --------->AtMYB61           --------->ANAC58             ------>ZmHOX2a(2)       <---------GLK1(1)  --------->MYB46(3)           -------->P             ====================================HOX2a_HOX2a--------->ANAC58     --------->ANAC46         --------->ICU4             ----------->ARR10  ------->TEIL           <---------ALFIN1  -----   <---------------AtSPL3    --------->ZAT14        <---------MYB52(2)       ------>ZmHOX2a(1)  -----   <---------------AtSPL8    <---------ZAT14       <-----------------------TaNAC69(2)--------->ANAC58   tgaagatggtactgatcgaatcaagtgagagtgaagacgagatcctcatcaaaaacgaaccaaagccagcgtcttcatcctcaccgcaacccacggagac  14897600                                                                                                  ---                                                                                                  <--                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                -----                                                                                                -----                                                                                                -----                                                                                                -----                                                                                                <----                                              ----------->GT1                                  <-----                                             ------->TEIL                                      ------                                          <---------MYB52(2)                                  <------                                         --------->At4g35610                                  ------>NtERF2                                         <---------At4g35610                                 <-------                                        ------>NtERF2                                   <---------ICU4                                       <---------ATERF1(2)                    <---------------AtSPL8        <---------LBD16                --------->ATERF1(2)                    <---------------AtSPL3      --------->ETT(2) <---------MYB52(1)<------NtERF2                        --------------->AtSPL8 ---->ANAC58   <---------YAB1    <---------ARR14(2)                      <------ZmHOX2a(1)   -------- ---->ANAC58 <---------At4g35610 --------->ARR14(2)                 <------ZmHOX2a(1)   --------->YAB1   gaaacaagtcgacggagatgattccgatgggttcgaaactgccagcgaacgtgaaattagcgatgaagaaggagaggaagatggtaccaaaaatgacgcc  14897700      <-----------RAV1(2)    <-----------HVH21 --------->O2 <---------O2 --------->TGA1a <---------TGA1a -------->HVH21 ----NtERF2 --------HVH21 ------RAP2.6(3) --------TGA1 -->NtERF2          <---------ZAT14 ---->RAP2.6(2)     <---------ZAT18 ---->RAP2.3(3)     --------->ZAT14 ---->bZIP60(1)   --------->ANAC46                                  --------->ANAC58 ---->DEAR3(1)  --------->AtMYB61                                   --------->ANAC58 -----bZIP60(1) <---------ALFIN1                                <------ZmHOX2a(1)      <------ZmHOX2a(2) -NtERF2 <------ZmHOX2a(1)                                      ==============================HOX2a_HOX2a --->RAP2.3(1) --------->MYB46(3)                       --------->ATHB12          <------------------ ---RAP2.3(1)<---------ARR14(2)                        <---------ATHB12          ------>NtERF2 ------ --bZIP60(1) --------->ARR14(2)                        <---------YAB1           --------->DEAR3(1)  < ->bZIP60(1)<------ZmHOX2a(1)                     <---------At4g35610           ----------->HVH21   -   gtcacgagtcaggaggaaccacagcactcggagaagaaggaagagcagattgagctaatgagtgaaggagaagccatagtcgacgacggatcaaacaagg  14897800 <<<<<<<<<GATA-4 <<<<<<<<<GATA-1                                                                                   -- <<<<<<<<<GATA-3                                                                            <-------- <<<<<<<<<GATA-2                                                                            <-------- ---WRI1                                                                                  ---------->DOF2 ----->GT1                                     <---------YAB1                          <-------GAMYB ---------ARR14(2)   <---------TOE1(3) <---------STY1(2)                              <-------------- -------->ARR14(2)   <---------TOE2(3) --------->STY1(2)    ------->TEIL              ---------------   tgaatccacattcaaattagtttatggtttatgggtttattagctagttctcattacaactgtacctattgacaaagtttcaattttgctgttaaaggtt  14897900  Previous    Next  AGI:  At4g30480.1    Description:  tetratricopeptide repeat (TPR)-containing protein. similar to TTL4 (TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 4), binding [Arabidopsis thaliana] (TAIR:AT3G58620.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66593.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide TPR-1 (InterPro:IPR001440); contains InterPro domain Tetratricopeptide region (InterPro:IPR013026) Range:  from: 14897359    to: 14899127    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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