Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               <-------                                                                                             --------                                                                                           <---------                                                                                          <------MYB46(1)                                                                                          <---------ANAC58                                                                              <---------ARR11(3)                                                                              --------->GLK1(2)<-----                                                                              --------->ARR11(3)                                                                         ---------->DOF2  <---------ANAC58                                                                      <---------AHL20(2)  <---------ANAC46                                                                      --------->AHL20(2)  <------MYB83               <----------DOF2                                       --------->AHL20(2)  --------->MYB46(2)             ---------->ID1                                         <---------YAB1       --------->MYB111(2)            <-----------GT1                                      --------->ICU4  <----------DOF2         <---------AHL20(2)                  ------->TEIL        --------->AHL20(2)  <---------TOE2(3)    <-------TEIL                        --------->MYB52(1)<---------ANAC46--------->DAG2 <---------AtMYB61   ttcaaatacatttttttctttttcaaatctagtatcaagtacaaacgaatgtctaaattcgcttggatttattaaaaaagtatctttaagtttggtgtac  14893700                                                                    <---------WOX13(1)                                                              --------->ARR11(3)                                                              <---------ARR11(3)                                                             <---------CCA1(2)                                                             --------->GLK1(1)       ---------->DOF2                                      <---------MYB52(1) --ZAT14                                                   <---------RAP2.6(3) ->ZAT14<---------------AtSPL8                          ------>NtERF2                    ----------->GT1 ------AtSPL8                                      --------->DEAR3(2)       <---------ANAC58 ----ZAT14    <---------ANAC46                     --------->MYB46(3)       <---------ANAC58   agtttgggttaaagtactgtgtaatataggtggattgttttgaaaaactttgaaccgatgccgatatctaattgattttcttgtttttttttggtaattt  14893800                       <---------ANAC55(2)                  ----------->GT1                  <------MYB46(1)                  <------MYB83             --------->AHL20(2)             <---------AHL20(2)            --------->AHL20(2)            --------->AHL20(1)            <---------AHL20(1)                                                                -------            <---------AHL20(2)                                                                <------           <---------------AGL15                                                             <-------          ===========================================================================================          <-----------------AGL3                                                             ========        <---------AHL20(2)          <---------ZAT6     ----------->RAV1(1)                   <-------       --------->AHL20(2)        ---------->ID1  --------->ANAC58                  --------->At4g35610       <---------AHL20(2)  <---------AHL20(2)    --------->ANAC58--------->ATHB12  <---------At4g35610   gaaaaccattttaatttatttggttacatatatttgtagtattcagtaagtaagaaacaacataagaagattggaatttgatattagctggtgctactaa  14893900                             ----------------->AGL1             ---------->DOF2 ----------------->AG           --------->HSFB2a(2)           <---------HSFB2a(2)--------------->AGL15     --------->ALFIN1        ----------------->AGL3                                               ---   <---------ANAC58       ------->MYC2                                        --------->ARR14(2)  <--   <---------ANAC46       <-------MYC2      --------->ANAC58                  --------->ARR11(3)  ---   <---------ANAC58       <-------MYC3      --------->ANAC55(2)            <---------ANAC46    ------ -------->AGL15           ------->MYC3      <---------ANAC55(2)        <---------ANAC58     --------- ---------AGL15          --------->ANAC46   --------->ANAC46           <---------ANAC46     --------- ----------AGL3          --------->ANAC58   --------->ANAC58           <---------ANAC58     --------- =========MADS_MADS      --------->ANAC58   --------->ANAC55(1)    <---------WOX13(1)       ------>MYB46(1) ==============================================MADS_MADS     --------->MYB52(1)             ------>MYB83 ----------AGL2        <---------ALFIN1  <---------REM1(2)  <---------ATHB12  <---------ARR14(2)  <--   ttttggagtgtttctgaaagaagacacacgttccaaaattgtcaacacgtaaacaaaaaccaataagggattgacttgtggatattggataaccaagcaa  14894000                             <---------AHL20(2)                             --------->AHL20(2)                            <---------WOX13(1)                          -------->HAHB4    <---------YAB1        --------->ATHB12    <---------TOE2(3)     ----------->GT1                                          ---------->DOF2 ------>AHL20(1)         <---------YAB1                                           --------->AHL20(2) -------AHL20(1)         --------->ICU4                                           <---------AHL20(2) ------>AHL20(2)  <---------ANAC55(2)                  <------------CBF        --------->YAB1 --->WOX13(1)     ----------->GT1                     --------->ATHB12        <---------YAB1 >ANAC58          --------->ANAC58                  <----------DOF2       <---------ANAC46     <----- >ANAC46          --------->ANAC58      <---------------AtSPL8            ----------->GT1     <------ >ANAC58          <---------ANAC46 <---------TOE2(3)<---------DAG2       <---------TOE2(3)    ------- -------AHL20(2)  --------->ANAC55(2)   <---------------AtSPL3       --------->CCA1(2)        -------   ttaattaagatggtttagagacgtaaaatgattaattaagaaatagtactaatactttattggaaaataagagatgaggtataataaaagatgagtagct  14894100       ----------->RAV1(1)   <-------MYC2   <-------MYC3   ------->MYC3   <-------PIF5   ------->MYC2               <----------DOF2   --------->TOE1(2)       ------>MYB83   ------->PIF5            ------>MYB46(1)   ------->MYC4          <---------MYB55(2)  <---------ANAC58       --------->MYB46(3)  <---------ANAC58      --------->ANAC46 <-----------------------TaNAC69(2)          <---------ANAC58 ----ANAC46             --------->ANAC58     <---------ANAC58 ---ZAT2   *TSS      --------->ZAT14        <---------ICU4                    <----------DOF2 -->At4g35610        <---------ZAT18 ------>ZmHOX2a(1)                 <-----------GT1   --------->REM1(1) -->ZAT2  ------->GAMYB --------->ANAC58 --------->YAB1         ------>ZmHOX2a(1)      ------>ZmHOX2a(1)   gggaacgtgcaacagaaaaatagttcacccaactttctcctattaatacttgcctcttctctcttcctacttctaaccttctttttctccttcatcacac  14894200                                                ---------->DOF2                                             --------->YAB1                                          --------->YAB1                                          --------->WOX13(1)              <---------ANAC58          <---------YAB1              <---------ANAC58         --------->TOE2(3)              <---------ANAC46        -------->ATHB1           <----------DOF2            --------->ATHB12                   <----------ID1        --------->ANAC58              <---------ICU4                     --------->ANAC58        --------->ANAC58              <--------HAHB4           <---------ARR14(2)        --------->ANAC46              --------->YAB1    ----------->RAV1(1)                      <---      <---------ALFIN1               --------->ICU4  --------->ANAC58    --------->ANAC58        <--- --------->ARR14(2)                  <---------ATHB12--------->ANAC58    --------->ANAC46    <------- <---------ARR14(2) <-----------GT1--------->WOX13(1)--------->ANAC46 <------ZmHOX2a(2)  <-----------RAV1(1)   acatatacacacgctttcgtttaaactctctctgtttcaatcattaatcagaaagaagcaacacaaatatggatcacgacaagtctacttcttgttgctg  14894300                               --------->ARR14(2)                               <---------ARR14(2)                               <---------GLK1(2)                     --------->ANAC46                            --------->HSFB2a(2)          --------->ARR14(2)    <---------ANAC46                      <------MYB83                <---------At4g35610--------->ANAC58        <---------ANAC58    <---------HSFB2a(2)   --------->At4g35610--------->ANAC58        <---------ANAC58   <---------LBD16    <---------ANAC58    --------->ZAT14 ------ANAC58         <---------MYB46(3)      <---------ANAC58    <---------REM1(2)  --------->MYB52(1) ------ANAC58         <------MYB46(1) --------->ANAC58   <---------ARR14(2)   <-------TEIL <---------ARR11(3) --At4g35610      <-----------RAV1(1) --------->ANAC58  <------ZmHOX2a(1)<------NtERF2  ----------->GT1   cgttcttgatgcttccacttatgttggtttctggattctcaagaaattgcttagcagaggatactctgttcacgcagcgattcgtagaaacggtatcttt  14894400                            ---------->ID1                    <---------ANAC58                    <---------ANAC58       --------->ATHB12                                   -------               --------->ATHB12           <---------ATHB12           --------->ATHB12    <------MYB83               <---------ICU4           <---------At4g35610   <------MYB46(1)            ----------->GT1              <---------ATHB12 <----------DOF2                <------MYB83               <------MYB46(1)    <---------MYB46(3)    <---------MYB46(3)                 --------->MYB59            --------->MYB46(2)  <---------MYB52(1)<---------ANAC46<-----------GT1    <----------DOF2                  --------->MYB59   ctccgtttgttcacgaatgatttcgggtttgttctttttttccgatgatttcgaagtctttgtttggttcttgatttgttttatatgtgtttggtaatta  14894500                                                                         --------->ALFIN1                                                                 <---------REM1(1)                                                              <---------TOE1(1)                                                              <---------TOE2(1)                                                             --------->SPL7                                                           <---------SPL7<-----------RAV1(1)                                         ------->GAMYB    <---------ANAC58                       ----                                      --------->MYB52(1)  <---------ANAC58                   <-------               <------ZmHOX2a(1)      ----------->RAV1(1) <---------ANAC46                   <-------   ----------->GT1           --------->CCA1(2)            <---------REM1(1)          ---------->DOF2 -->ICU4     <---------TOE2(3)  ----------->GT1          <---------------AtSPL8    <---------YAB1<---   ggggagagtgaaattgaggagatgatcagagagatggaaacaacagaagagagattagtggtgtacgatgtagatgtgttggattatcaaagcatacttg  14894600  Previous    Next  AGI:  At4g30470.1    Description:  cinnamoyl-CoA reductase-related. similar to cinnamoyl-CoA reductase-related [Arabidopsis thaliana] (TAIR:AT2G23910.1); similar to unknown [Populus trichocarpa] (GB:ABK93002.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 14894111    to: 14896821    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version