Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   <---------YAB1                                                                                --------->AHL20(2)                                                                                <---------AHL20(2)                                                                                <---------AHL20(1)                                                                               --------->YAB1                                                                              <---------YAB1                                                                            <--------HAHB4          -                                                                            -------->ATHB1        ---                                                                            --------->ATHB51      ---      --------->ANAC46                                                      -------->HAHB4       <---     <---------------------WRI1                                             <---------ICU4      <----   --------->TOE2(2)                                                        <---------AHL20(2)  -----   --------->TOE1(2)                                                        --------->YAB1      ----- <-------TEIL<-----------GT1                                               <---------YAB1       <---- ------->LBD16                                                             <---------ATHB51     ----- -------ANAC55(2)                                                     ----------->GT1           ----- -------ANAC58                                                       --------->DAG2             <---- -------ANAC58                                       <-----------GT1---------->DOF2             <---- -------ANAC46          ------->TEIL        --------->ICU4<---------DAG2--------->AHL20(2) -------->P ------------>SPL14  <---------MYB52(2)     <---------YAB1<----------DOF2  --------->ICU4 <----------   ccgtacatacgatattaactacgacgaaccaaaaacataaaacatacttattgtttcacactttaagtcgaaaagtaattattataatttagttaccaga  14886300           <---------HSFB2a(2)        --------->AGP1       --------->ZAT2       --------->At4g35610       <---------At4g35610    ------>ZmHOX2a(2)                               ------>MYB46(1) ----->ZmHOX2a(1)                          --------->ZAT2 -------->RAV1(2)                          ----------->RAV1(2) --->ZmHOX2a(2)                            --------->At4g35610 ---ZmHOX2a(2)                             <---------At4g35610 -----ARR14(3)               --------->ATERF1(2)  <---------ALFIN1 ---->ARR14(2)               <---------ATERF1(2)  --------->AtMYB61 ---->AGP1 --------->HSFB2a(2)             <---------ZAT2 --------->MYB46(3)          --------->ALFIN1 -----GLK1(2)               --------->DEAR3(2)   --------->MYB46(3)                 <---------At4g35610 ---->ARR11(3)     <---------At4g35610   <-----------RAV1(2)                        --------->ZAT2 ---->ARR14(3)     <------NtERF2<-----------RAV1(2) ------>MYB83 <<<<<<<ZML2        <---------ZAT2 -----ARR14(2)    --------->ANAC58--------->At4g35610   --------->ARR14(2)          --------->At4g35610 -----ARR11(3)    --------->ANAC58<---------At4g35610 --------->ANAC46        <---------YAB1 -GT1  <---------ZAT2      ------->TEIL------->TEIL--------->MYB52(1)         --------->ICU4       <-   tcctgatccagctctagagccagcaaatgaaccggcagatgaaccagctgaaccacccgaaccactagaactcgaacttgatgatgagctggagctagat  14886400                                                       --------->DREB2C(2)                                                       --------->ANAC46                                                       --------->RAP2.3(3)                                                       --------->RRTF1(2)                                                       --------->RRTF1(3)                                                       --------->DEAR3(1)                                                       <---------ATERF1(2)                                                       --------->ATERF1(2)                                                       --------->RAP2.6(2)                                                       --------->RAP2.3(2)                                                      --------->DEAR4(2)                                                      <------NtERF2                                                      --------->ERF1                                                      --------->ATERF1(1)                                                      --------->RAP2.3(1)                                                      --------->ORA47(2)                                                      --------->RAP2.6(1)                                                     ------>NtERF2                                                    --------->ANAC58                                                    --------->ANAC46                                                    --------->ANAC58                                        --------->DEAR3(1)                                       <---------LBD16--------->RRTF1(1)                                     <---------ALFIN1<---------ATERF1(1)                                    --------->ZAT2  --------->DEAR3(1)                                    <---------ABI4(2)--------->LBD16               ----------->RAV1(2) --------->ANAC58<---------MYB55(2)               =============================RAV  <---------ARR14(2)          --------->TOE1(3)        --------->ANAC58--------->MYB46(3)         ----------->RAV1(2)    ----------->RAV1(1)--------->DEAR3(2)       --------->ARR14(2)  =================RAV  --------->ARR14(2)       <---------ARR14(2)  ----------->RAV1(2)  <---------ALFIN1                ------->GAMYB    <---------HSFB2a(2)  --------->ARR14(2)    ----------->HVH21               --------->DEAR3(1)    --------->HSFB2a(2)  <---------GLK1(2)   --------->ATERF1(1)  --------->ARR14(2)   ------>ZmHOX2a(2)     <---------ARR14(2) ------>NtERF2         ------>MYB83 --------->ANAC58 <---------ARR11(3)   <---------HSFB2a(2)  --------->ARR14(2)     ------>MYB46(1) <---------ARR14(2)   --------->HSFB2a(2)--------->LBD16 <------NtERF2         --------->ANAC58 --------->ARR11(3)  ------>ZmHOX2a(2)--------->MYB52(1)------>NtERF2  <---------ALFIN1             < --------YAB1 ------->TEIL--------->GLK1(2)<---------ARR14(2)   --------->AtMYB61    --------->MYB52(1)   gatgatctggaacctgaacctgatccagaacctgcaccagcaccggagcccgacccgccgccaagaccaatccccaatccaacgcccaaaccgattccaa  14886500                                     --------->At4g35610                                     <---------At4g35610                                    <---------DEAR3(2)                                   <---------DEAR3(1)          --------->WOX13(1)       <---------RAP2.3(3)        --------->WRKY18(1)       --------->RAP2.6(3)       <--------ZAP1          <---------ANAC58       <-----------HVH21      <---------ANAC58                                                    ---  <---------ZAT2          <---------ANAC58       --------->YAB1                            <---------ARR11(3)  --------->ZAT2          <---------ANAC58  <-------GAMYB                                  --------->ARR11(3) ---------ALFIN1      <----------DOF2<------NtERF2                                     ---------->DOF2   tcccacctaggtcaatccccaagtcttttcttgcgagtcggctctcggttaacataactaaacttgaaataactactaaaccaagaagaaaaagaccttc  14886600                     <---------ANAC58                                      <------MYB83                     <---------ANAC58                                      <------MYB46(1)                     <---------ANAC46                                     <---------------AtSPL8                 <---------HSFB2a(1)                                      --------->MYB111(1)                <---------ARR11(3)                                        --------------->AtSPL8                --------->ARR11(3)                                        --------->MYB46(2)                <---------ARR14(2)                                        --------->MYB59                --------->ARR14(2)                                    --------->ATHB12               <---------GLK1(1)                                    <---------------AGL15    <-----------------AGL1              <---------MYB52(1)          --------------->AGL15         <--    <-----------------AG         <---------ANAC58             ----------->GT1    *TSS             <--    ================================================================================MADS_MADS     <-- --->NtERF2    --------->GLK1(1) <---------ANAC58             <---------ZAT6  <-------TEIL       <---   ggccttagccattttggaaatcttcgtgtgttaagacttgccgatagatgtgtttgagtttatagtgtaacttgattaggtacaaaaatgaataacatgt  14886700                                     <---------ANAC46                                     <---------ANAC58                                     <---------ANAC55(2)        --------->TOE2(2)                                     <---------ANAC55(1)        --------->TOE1(2)                                     <---------ANAC58       <-----------GT1                                  <---------MYB52(1)    <---------AHL20(2)                                 --------->At4g35610    --------->AHL20(2)             --------->HSFC1(2) --------->RAP2.6(2)    <---------AHL20(1)        <---------HSFB2a(2)     >>>>>>>>>AtERF-4       --------->AHL20(2)        --------->HSFB2a(2)   <---------At4g35610      <---------AHL20(2)      <---------AHL20(2) <---------ANAC58           <---------ICU4         --------->YAB1    <-----------TBP      <---------ANAC46           --------->ATHB51  <-------TEIL       --------->AHL20(2) -------ANAC58           <---------ANAC58     <-----------GT1<-----------GT1 <---------YAB1  -------- -------ANAC58       <------------CBF--------->O2   <--------HAHB4    ------->TEIL   <---------ANAC58 -------ANAC46 <----------DOF2--------->At4g35610  --------->ICU4 ------>MYB46(1)    <---------ANAC58 ----TEIL    <---------HSFC1(2) --------->RAP2.3(2)<---------YAB1 ------>MYB83--------->YAB1<--------   tcgtgtatttatagaagctttgggattgtgtgagccgctacgtgtatatcaccataattaatttaacctacgtacatttatcatatttcgttttattata  14886800                                               <---------ARR14(2)                  --------->GLK1(1)       <---------ANAC55(2)                  --------->CCA1(2)       <---------TOE2(3)                  <---------GLK1(1)     --------->AHL20(2)                 <---------ARR14(2)     <---------AHL20(2)                 --------->ARR14(2)  --------->ATHB51                      <------MYB46(1)           <---------YAB1            <---------ICU4                        <------MYB83          --------->AHL20(2)         <--------HAHB4            --------->TOE2(3)          <---------AHL20(2)         --------->YAB1  ------->TEIL          ----------->GT1          --------->AHL20(1)        --------->AHL20(2)       <-----------GT1      --------->CCA1(2) ->YAB1  --------->YAB1             --------->ICU4  <---------AtLEC2       <---------ANAC55(2) -YAB1  --------->ICU4        ----------->GT1  --------->ARR14(2)         --------->MYB59         <--   gtttagagaaattataatggatatgcattgaagagtgaataattaagtatatatgcatgtttttttcttaattagataggtaagatagagagtgatgttt  14886900                                                                           --------->YAB1  <---------LBD16                                                  ---------->DOF2         <---------AHL20(2) --------                                            ----------->GT1         <---------ANAC46      --------->MYB52(1)                                   ------------------------>ANAC81 <---------TOE1(3)      <---------At5g28300      <-----------GT1     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    <---------TOE2(3)     <-----------GT1 ---------GT1         ---------->DOF2---------->DOF2     >>>>>>>>>TBF1 ------->TEIL  --------->AHL20(2)   ttacatttttacccttgtaagagaaaaagagttgaaaatgaaagagaagaaaaaaagaagaagaagtttaacgtatataataactcataaattaccggtg  14887000                    --------->AHL20(2)       ----------->GT1           --------->AHL20(2)                   <---------AHL20(2)   --------->AHL20(2)             <---------AHL20(2)                   --------->AHL20(2)   <---------AHL20(2)             --------->AHL20(1)               <---------YAB1          --------->AHL20(2)       ----------->GT1  --------->ANAC55(2)            <---------YAB1             <---------AHL20(2)   <---------AHL20(2) <-----------GT1          --------->YAB1            --------->AHL20(2)   ----------->GT1<---------AHL20(2) ->LBD16  <---------AtLEC2       --------->TOE2(3) --------->YAB1      <---------AHL20(1)   ---------   ataaacaaattagcatgataaataaataagctaatccataaattaatatgttataagaatagataattgttaatttattagttactgaatgttaacatga  14887100                   <---------ANAC46                <---------MYB52(1)          -------->HAHB4          <---------ICU4          <--------ATHB1         <---------ATHB51           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)         --------->ICU4           --------------->AGL15       ---------->DOF2         <---------YAB1           ===================================================================     --------->AHL20(2)           <---------------AGL15      <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    -     --------->AHL20(1) --------->YAB1                    <----------DOF2                     <------    --------->YAB1 <---------ANAC55(2)               <---------At5g28300    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) >YAB1 --------->YAB1  <---------YAB1               <-----------GT1        ----------->GT1 <---------YAB1   tataaaaaataataattcgttatgtataatagttatctataagtagcatacaatttaccactttaaaagacatgttagggtgataactaaattgttaatg  14887200  Previous    Next  AGI:  At4g30450.1    Description:  glycine-rich protein Range:  from: 14886033    to: 14886681    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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