Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              ----------->GT1                                                                            <---------MYB46(3)                                                                         ------------>MYB.PH3(1)                         ------>ZmHOX2a(2)                        --------->RAP2.3(3)                        <---------At4g35610                      <------NtERF2              <------NtERF2                                     ------>NtERF2 <---------MYB52(1)  ---             --------->LBD16                                    --------->ABI4(1)               <----            --------->DEAR3(1)        --------->ANAC58          <---------ATERF1(1)           -------           <---------LBD16            --------->ANAC58         <---------ATERF1(2)           --------          ------>NtERF2<---------AGP1<-------TEIL              --------->ATERF1(2)          <--------         --------->DEAR3(1)      <---------------AtSPL8        --------->RAP2.6(2)         --------->MYB52(1)       <---------At5g28300   --------->At4g35610               --------->DEAR3(1)    --------->RAP2.6(3)     --------->ARR14(2)--------->ARR14(2)------->TEIL         --------->RAP2.3(1)   <---------DOF5.7(2)     <---------ARR14(2)<---------ARR14(2)--------->GLK1(2)    --------->ATERF1(1)   --------->MYB52(1) ----ZmHOX2a(1)        ------->TEIL<---------SPL7            <---------ATERF1(1)--------->MYB59 ----- ->HVH21--------->DEAR3(2)   <---------At4g35610     <---------ALFIN1  ---------->DOF2     -------->P   ggacggagataccgccggagcgatggatctgagcggaggtacgaacctgtttctcccactggatgccgccccaagaagcggttagataacggctaccgga  14883100      <---------HSFC1(2)                                                                          ---      --------->HSFC1(2)                                                                         ----     ------->TEIL                                                                                ----  --------->ANAC46                                                                             ------ ------>DEAR3(2)                                                                               <----- -----ARR14(2)                                                                                 <----- -->LBD16                      --------->At5g28300                                       ------->GAMYB ->HSFB2a(2)        --------->ANAC58                    ---------->DOF2               --------->MYB52(1) -LBD16 <----------DOF2        <-----------HVH21    --------->ZAT18             ----------->GT1------ ---->ARR14(2)      --------->ANAC58         <------ZmHOX2a(1)              ---------->DOF2--------->ALFIN1   atcgacgaagctttggaaactcaagtaagaagcggtgagagcgatgaggaagagagcccaaagaaacatggtgctcgtagaagcgaaacaacggtggagc  14883200                                     <---------LBD16                                   --------->WRKY12            --------->WRKY18(1)    --------->WRKY38(1)      <---------WRKY18(1)          --------->WRKY45      <-----------GT1              ----------->HVH21     --------->WRKY38(1)          --------->DOF5.7(2)     --------->WRKY12            <-------GAMYB                                <-----------GT1     ----------->HVH21          <---------DEAR3(1)                          <---------AHL20(2) ------>MYB52(1)                <---------ANAC46                            --------->AHL20(2) ------->HVH21                 <------NtERF2                            <---------AHL20(2) ------->TGA1                 --------->LBD16                           --------->AHL20(2) --->ZAT2  <-----------HVH21 --------->ANAC46                          <---------AHL20(1) ----ZAT2 ----------->GT1   <---------LBD16   --------->At4g35610      <---------AHL20(2) ----At4g35610            -------->P<---------DOF5.7(2)                --------->AHL20(2) --->At4g35610           <-----------GT1      <---------At4g35610  --------->ICU4    <----------DOF2   tgacggtttgaccggtcaattttgaatttacccggcgttgacggaaacagctcatcttctattgaaggcataatttaattaaactctctttacaacaaaa  14883300                                                                                  <----------DOF2                                                                                 ------>ZmHOX2a(2)                                                                                <---------RVE1(1)                                                                                <------ZmHOX2a(2)                                                                               --------->ARR14(2)                                                                               <---------ARR11(3)                                                                               <---------AGP1                                                                               <---------ARR14(2)                                                                               --------->AGP1                                                                               --------->ARR11(3)                                      <---------AHL20(2)                       --------->ARR14(3)                                      <---------AHL20(1)                       <---------ARR14(3)                                      --------->AHL20(2)       >>>>>>>>>TBF1  <---------CCA1(2)    <-                                      --------->AHL20(1)    >>>>>>>>>TBF1  <-------TEIL          <---                                     <---------AHL20(2)     ------------------------>ANAC81     -----                <---------AHL20(2)   --------->AHL20(2)  >>>>>>>>>TBF1  --------->At4g35610     <----     ------>ZmHOX2a(1)         ----------->GT1      ------------------------>ANAC81 <---------AHL20(2)    --------->TOE2(3)         ----------->GT1   <------ZmHOX2a(1)       <---------At4g35610     <----   attcttcctcaacaaaaatttatcggaaaaaatgggtaattaaatttagaggaaatgaagaagaagaagaagacagatgcagatcttttattttggtata  14883400             --------->ANAC58             --------->ANAC58                                                                  <-----           ---------->DOF2                                             <----------ID1         <------ <---------AHL20(2)       <------ZmHOX2a(1)                            ----------->HVH21      <------ --------AHL20(2)       <---------TOE2(3)                         <--------P                  <------ ------AHL20(2)     --------->At4g35610                          <-------GAMYB               -------- ---->ARR11(3)   <---------At4g35610           ----------->GT1 <------NtERF2                <-------- -----AHL20(1)   --------->At4g35610   --------->CCA1(2)     --------->ALFIN1         *TSS  <-------- -----ARR11(3)  --------->GLK1(2) <------ZmHOX2a(1)      <-----------RAV1(2)        ----------->GT1   tattttttttcccaaaagcatctgctaaggagaagaggaagagacggagaagtatatatacaggtggggttaggggacaaggagacgcgttaatttgatt  14883500                                                                    --------->ATHB51                                                                    <---------ICU4                                                                    --------->AHL20(2)                                                                    <---------AHL20(2)  --------->ARR14(2)                                                --------->ATHB12  <---------ARR14(2)                                               --------->ICU4  <---------GLK1(2)                --------->AHL20(2)            <---------ICU4  <------------CBF                 <---------AHL20(2)           <---------YAB1 ----WOX13(1)              <-----------GT1                      ------>ZmHOX2a(1) ---ANAC58              --------->YAB1                        --------->YAB1 ---ANAC58            <-----------TBP                        <<<<<<<<<ARR2 ------CBF           <----------DOF2                         <<<<<<<<<ARR1                     <----- ->ATHB12           <---------ANAC58      <---------MYB46(3) <<<<<<<<<ARR2                 ---------- -AHL20(2) <---------AHL20(2)     --------->AHL20(2)         <<<<<<<<<ARR1         ----------->GT1 -YAB1<---------YAB1<---------ANAC58 <---------TOE2(3)   ------------>CBF        ---------->DOF2-----   gccagattgtcattttttttttgcttttataacaaaattaatatttgttgacaaaaaaaaacaatcctaattatttgtttagagaaagtaaaaaaaagaa  14883600        --------->ANAC55(2)                                                 <------ZmHOX2a(1)     --------->ICU4                                               --------->LBD16   <---------ICU4                                                --------->ANAC46                   <  --------->ICU4                                                <---------LBD16                    <- ----GLK1(2)          ----------->GT1     --------->LBD16      <---------At5g28300                 -- >DOF2  <---------ANAC55(2)            -------->P     <-----------GT1     <---------TOE2(3)    <----- ---->GLK1(2)----------->GT1           <---------At5g28300    <-----------GT1               ---------   tctactaattatgtattgaaaaactggataaatgctaaatctaccgcaatcttttttcaccaatttaccgcaatttaaggagttttaaaaaacatagtta  14883700          <----------DOF2      <---------ANAC58      <---------ANAC58      <---------ANAC46      <---------RAP2.6(2) ---------AHL20(2)                                                          <---------ATHB12 --------AHL20(2)                                                          <---------TOE2(3) ------->AHL20(2)                                               --------->CCA1(2) ----AHL20(2)   <-----------GT1        ---------->DOF2         <---------ARR11(3) -->GT1 <------NtERF2         ---------->DOF2                  --------->ARR11(3)   attttatggcgtcttttttttcttctccatgttaaagcttagaaagctagaatgttgaagtatgagatatgaagactaatgaagtttgaaagaattcact  14883800                                   <---------AHL20(1)                                   --------->AHL20(1)                           --------->At4g35610                        <---------YAB1   <---------AtLEC2         --------->ANAC55(2)                   <---------MYB46(3)  <-----------GT1            --------->YAB1          --------->ANAC55(2)      --------->ARR11(3)         --------->YAB1     ---------->DOF2          <---------ANAC55(2)----------->GT1                 <---------ATHB12---------->DOF2  -------   tgagtttcgattatgtattgtttgttatgagttgaaatattttgcatttctatacaaattgaaatcatacataatgtgtgaaagaaagcgtctaaaaaaa  14883900                                                                               ------>MYB83                                                                               -------->P                                                                               ------>MYB46(1)                                                                            --------->MYB46(3)                                                                          <---------PCF2                                                                      ------->PIF5                                                                      ------->MYC4                                                                      <-------PIF5                                                                      <-------MYC2                                                     --------->AHL20(2)  ----------->HVH21                                                 --------->AHL20(2)   ------->MYC2                                                 <---------AHL20(2)   <-------MYC3                                             --------->AHL20(2)       ------->MYC3                                             <---------AHL20(2)       --------->TOE2(2)                                            <---------AHL20(1)        --------->TOE1(2)                                            --------->AHL20(1)       <---------ANAC58                                            --------->AHL20(2)       <---------ANAC58   <---------CCA1(2)                        <---------AHL20(2)       <---------HSFB2a(1) --------->YAB1          ------->MYC3  --------->YAB1<---------AHL20(2)--------->ALFIN1 --->DOF2                <-------MYC3 <---------ATHB12   ----------->GT1--------->SPL7   gactcataactcattcaacaattaacacatgtaatctctaatcaaatttaattaaaaaattgtaaacaagaacgtgcgaccaacttgcaactaattttgt  14884000  Previous    Next  AGI:  At4g30440.1    Description:  GAE1 (UDP-D-GLUCURONATE 4-EPIMERASE 1); UDP-glucuronate 4-epimerase/ catalytic. Identical to UDP-glucuronate 4-epimerase 1 (GAE1) [Arabidopsis Thaliana] (GB:Q9M0B6); similar to GAE2 (UDP-D-GLUCURONATE 4-EPIMERASE 2), catalytic [Arabidopsis thaliana] (TAIR:AT1G02000.1); similar to Os02g0791500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048359.1); similar to UDP-glucuronic acid 4-epimerase [Zea mays] (GB:NP_001105911.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Nucleotide sugar epimerase; (InterPro:IPR00808 Range:  from: 14881861    to: 14883486    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version