Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             <---------------AGL15       --------->ANAC46                       <----------DOF2          --------->ANAC58         <---------At4g35610                   <----------DOF2              --------->ANAC58 <---------ARR14(2)--------->MYB52(1)                  <---------ANAC58            ---------->DOF2    --------->ARR14(2)------>MYB83              <----------DOF2               ------>MYB83 --------->ANAC46--------->At4g35610---------         <---------At4g35610                ------>MYB46(1)      --------->GLK1(2) ------>MYB46(1) ------At5g28300  <---------ANAC58        --------->TOE1(2)     <---------CCA1(2)<---------MYB59<----   actgcccatttagcttctttgctttctttcccctctgagtaaaacctacaaagcaatacacaactcaaatctgtaatctgaaacctaactagagatttaa  14857600                                                                                              -------                       <---------ANAC58                                 <---------GLK1(2)    --------                       <---------ANAC58                              --------->HSFB2a(2)    <--------                      <---------ZAT2                                 <---------HSFB2a(2)   --------->ANAC58                      --------->ZAT2                        --------->ANAC58               --------->ANAC58          --------->ANAC58                                  --------->ANAC58              --------->WOX13(1) >CCA1(2) --------->ANAC58               ---------->DOF2  ---------->DOF2     <---------AHL20(2) -----TOE2(3) ---------->DOF2  ----------->GT1  ----------->GT1---------->DOF2--------->AHL20(2)   gttaaacccagtacccaaaatcggagcttgagcttgtaacatctaaagaagagataaatctaaagcaaagtctagaatttttaatttctgggcaatcaaa  14857700                            --------->MYB52(1)                           --------->DEAR3(1)                           ------->GAMYB                                ------>ZmHOX2a(1)                           ----------->HVH21                           --------->TOE2(3)                          <---------MYB55(2)                           --------->TOE1(3)                          --------->MYB46(3)                        ------>ZmHOX2a(1)               --------->ANAC58                                  ---------->ID1      <----------DOF2     --------->DEAR3(2)                 <---------ANAC58 --->DOF2      --------->ANAC58                              <---------ANAC58 ->YAB1     <------ZmHOX2a(1)           ---------->DOF2     <---------HSFC1(2) -ATHB12 <---------LBD16--------->MYB52(1)                  --------->HSFC1(2)            --------->At4g35610   gttgaagactttcaggaacgtaagtctaaccgacggatgagagaaagaaaacttacataagaagcttgtccttccttaactccattagaagaagctcaag  14857800                                                                   <---------ANAC58                                                                   <---------ANAC46                            --------->YAB1                         <---------ANAC58                     --------->AtLEC2       <----------DOF2 <----------DOF2                <-----------ARR10  --------->MYB52(1) <---------ICU4       ----------->HVH21   ctcaagctcgagtaaacaaatctatgcaaattagaattaacagaagcttttaaaaatcatttctttgattcgtgtctctgacactctctcactcttactc  14857900                                                                        --------->ANAC58                                                                        <---------O2                                                                        --------->TGA1a                                                                        <---------TGA1a                                                                        <---------ANAC55(2)                                              <---------ARR14(2)        --------->ANAC55(2)                                              --------->ARR14(2)        --------->O2                                             <------ZmHOX2a(1)          --------->ANAC58                 ===================================HOX2a_HOX2a         --------->ANAC46         <---                 ------>ZmHOX2a(2)     --------->LBD16                 <---------LBD16           <---                <------ZmHOX2a(2)     --------->HSFB2a(2)             ------------->DYT1        <----                ====================================HOX2a_HOX2a      ----------->HVH21          -----               --------->ARR11(3)     <---------HSFB2a(2)           <-----------HVH21 --------->GLK1(1)               <---------ARR11(3)     <---------ANAC46      --------->GLK1(2)         <---------GLK1(1)           ---------->DOF2           <---------LBD16    <------ZmHOX2a(1) ----------->HVH21   -------   tctctaaatctgagaaagatcgtgtttttgtttagttcttccggagaggattggaagaggagaatcactgagtcacgggacgagtcagaaatcggaggga  14858000                                                                                                <----                                                                                                <----                                                                                                -----            <---------ANAC58                                                                    -----            <---------ANAC58                                                           --------->YAB1   ---------->ID1                                                                   --------->WOX13(1) ------CCA1(1)                                ---------->DOF2                     <---------MYB52(1) ------RVE1(1)                              --------->ANAC58     <---------ZAT14 --------->TOE2(3)<-- -----ARR11(3)                              --------->ANAC58     ---------->DOF2----------->GT1------ ---->ARR11(3)                         <----------ID1 <---------ALFIN1     <---------ICU4      <----- ---->GT1*TSS                 --------->MYB52(1)   <---------WRKY38(1)    --------->ICU4---------->DOF2   tatttgtttttttttcttgggaatacttgagccatcggtataagacaagaaagtcaacacatttgactaaagtgacattatttcgttaatcaaagtcatt  14858100                                                                                            <--------                                                                                        <---------ATHB12     ------------>CBF                   <-----------GT1                            --------->YAB1    <-----------GT1                <---------ANAC58                          <------ZmHOX2a(2) -----ICU4                         --------->ANAC55(2)                      --------->ARR14(2) ----HAHB4                         <---------ANAC58                         <---------ARR14(2)     -- ---->ATHB51                       <---------ANAC46                         --------->AGP1  <-------- ---->ATHB12                       <---------ANAC55(2)                     <---------At4g35610    <-- -------YAB1                       <---------ANAC55(1)            <---------YAB1  <---------ATHB12<-- --->ICU4                         --------->MYB52(2)            <---------ZAT6  --------->WOX13(1)<-- ----YAB1       --------->ZAT6   <-----------GT1           <----------DOF2 --------->At4g35610   <---   attagtttacaatacaaaacactaattagacaatgttacttgttacttcacaaaaacacttctttagtcttatagtcagatccaatcacaatcactttct  14858200 -DAG2 ------->LBD16                         <----------DOF2 --DOF2                             --------->GLK1(2) -------ANAC58                     <---------GLK1(2)   <---------AHL20(2) -------ANAC58            --------->YAB1             <---------YAB1 -------ANAC46           <---------ATHB12         <---------MYB52(1) ------LBD16           --------->WOX13(1)        <----------DOF2                     <---------ALFIN1   ccgtgtgagtcacaatctcacattccaatcagaaaacgattctttagcctcctttatttttatgttcaatataaacttttgaatcacacacttgaaaaca  14858300                                 --------->AHL20(2)                                 <---------AHL20(2)                                --------->AHL20(2)                         ----------->GT1                         <------MYB83               <----------DOF2                        --------->MYB59          ------>MYB83                        --------->MYB46(2)       ------>MYB46(1)          <----------DOF2<------MYB46(1)<---------ANAC55(2)                <---------ICU4     <---------MYB59    --------->MYB111(1)  ------->TEIL                 <---------YAB1   tagttgacataactttggaggtgaagtaggtaaattaaaatcacatgaaccaagctttacttagaacttatacttcatcatggacaaattgaaacagaaa  14858400                                         <---------ICU4                                         --------->ATHB12                                         --------->YAB1              <---------ATHB12          <---------ATHB12          --------->MYB46(3)            --------->ICU4     ----------->RAV1(1)        <-----------GT1               --------->GLK1(1) --------->ANAC58    --------->ATHB12           <---------ICU4           --------->ANAC46   <---------YAB1              --------->YAB1           --------->ANAC58   --------->ICU4------->TEIL --------->ICU4  <---------TOE2(3)  <---------TOE2(3)           <---------ATHB51<---------TOE1(3)         <----------ID1         ------ --------->YAB1 <---------GLK1(2)<---------YAB1----------->GT1      ---------->DOF2 ----------->RAV1(1)   cattgatgattaaccactgaatctcaagtgaaattatgagaaatcattaaggtaacataagcaacatgtttaaagtgacaaatggacaacatttctatca  14858500  Previous    Next  AGI:  At4g30360.1    Description:  ATCNGC17 (cyclic nucleotide gated channel 17); calmodulin binding / cyclic nucleotide binding / ion channel. Identical to Probable cyclic nucleotide-gated ion channel 17 (CNGC17) [Arabidopsis Thaliana] (GB:Q8L7Z0;GB:Q9M0C4); similar to ATCNGC16 (cyclic nucleotide gated channel 16), calmodulin binding / cyclic nucleotide binding / ion channel [Arabidopsis thaliana] (TAIR:AT3G48010.1); similar to ATCNGC14 (cyclic nucleotide gated channel 14), calmodulin binding / cyclic nucleotide binding / ion channel [Arabidopsis thaliana] (TAIR:AT2G24610.1); similar to ATCNGC18/CNGC18 (CYCLIC NUCLEOTIDE-GATED CHANNEL 18), calmodulin binding / cyclic nucleot Range:  from: 14854817    to: 14858009    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g30370.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT2G18670.1); similar to hypothetical protein OsI_008624 [Oryza sativa (indica cultivar-group)] (GB:EAY87391.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 14858496    to: 14859509    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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