Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <-----------GT1                                                        --------->ARR14(2)                                                    --------->LBD16                                                    --------->At4g35610                                                    <---------At4g35610                                                   --------->ANAC46                                                  <---------LBD16                                                <---------ARR14(2)                  <---------ARR14(2)            --------->ARR14(2)                  --------->ARR14(2)           --------->CCA1(2)              --------->ANAC58                --------->ANAC58               <---------GLK1(1)              --------->ANAC58     <---------At4g35610                       --------->GLK1(1)       --------->DAG2               <     <---------ZAT2--------->CCA1(2)          <---------ARR11(3)      ---------->DOF2               -     --------->At4g35610                      --------->ARR11(3)--------->ANAC46      <----------DOF2     --------->ZAT2---------->DOF2            --------->ARR14(2)--------->ANAC58      <---------MYB52(1) ----->YAB1     --------->ANAC58      <------ZmHOX2a(2) <---------ARR14(2)  ---------->DOF2<--------- -----YAB1   <---------ATHB12  <-------TEIL   <---------ARR14(2)--------->ANAC58  -------->P      <--   aattctctgctccgaatcaagaaacgcgctcggttcatcgatcaagtagatatccgcagatttaccaaggcataaagctaaagcaaccctttgtttctct  14831200                                                                                                  ---                                                                                                 <---                                                                                                 ====                                                                                                <----                                                                                                -----                                                                                                -----                                                                                                -----                                                ----------->GT1                                 <----             <---------REM1(1)                <---------At4g35610                         <---------MYB52(1)           <-------GAMYB                 ------>ZmHOX2a(2)                               <-----------HVH21          <---------MYB46(3)           --------->ARR11(3)                               <---------ANAC58  ----------->HVH21                    <---------ARR11(3)                               <---------ANAC58 ---------At4g35610                 ------>ZmHOX2a(1)              --------->ANAC58  <-------MYC2---- ---------->RAV1(2)            <---------At4g35610            ----------->HVH21      <-------MYC3<--- --GT1    --------->MYB52(2)   --------->At4g35610   --------->YAB1--------->ANAC58  ------->MYC2<--- -------ALFIN1     <----------DOF2  --------->HSFB2a(2)     ----------->RAV1(2)      ------->MYC3----   ccacctgatagtttgttgaagcttttatccatgagctcctcgatcttgagcggtttcataacgtctgacacgaattggtgttctgcatatgcgttaggga  14831300            <---------CCA1(2)   ------>ZmHOX2a(1) --->ZmHOX2a(2) ------HSFB2a(1) =========HOX2a_HOX2a -----ARR11(3) ---->ARR14(2)                                                                                      < ---->ARR14(3)                             ----------->HVH21                                       <- ---->ARR11(3)                        <---------TOE2(3)                                            -- -----ARR14(2)                        <---------TOE1(3)                                            -- ----->HSFB2a(1)                     <---------At5g28300                 <---------ZAT14           -- ------HSFC1(2)                     <-----------GT1             --------->ANAC58                   <- ---ZmHOX2a(2)              --------->TOE2(3)        <---------YAB1      --------->ZAT14          <-- ----->HSFC1(2)      --------->ZAT6 --------->MYB52(1)          --------->ANAC58            ------->TEIL   tcttcctgtgtatcaaatctctaacagtaatctcaaatttacggtttgacatatgttgattcttgtaagaaacagagaactgtggtatctcatgtacttg  14831400       XXXXXXXXXXXXXXXXXXXX>MIR780.2   ------>ZmHOX2a(1) <---------HSFC1(2)                      <---------YAB1                                             - --------->HSFC1(2)               --------->ANAC58                                                 <- ------>ZmHOX2a(2)                --------->ANAC58                                                 <- ------ZmHOX2a(2)              --------->LBD16                                                     <- --------ARR11(3)             --------->ANAC58                                                     <- ------->ARR11(3)             --------->ANAC46                                                  ----- ------->AGP1                 --------->ANAC58                                          --------->GLK1(2) ------->ARR14(2)            <---------LBD16                                        --------->YAB1 -- --------ARR14(2)          <---------ARR14(2)                                 --------->YAB1    <---- -------GLK1(1)            --------->ARR14(2)  <---------TOE2(3)            ----------->RAV1(1) -----   agatccttcttcatcaatatcaagcttcgaacccgcaagcattttgataaacgttgtcttccccgttccattctctcccaacataactataatctgagaa  14831500            <---------TOE1(2)        <---------YAB1    <---------ARR14(2)    --------->ARR14(2) <---------MYB52(1) -------->LBD16 --------ANAC58 --------ANAC58                                               <------------CBF --------ANAC46                   --------->ZAT18          --------->At5g28300 --------ANAC55(2)       --------->At4g35610          <---------ZAT14<---------ANAC58 ---->GLK1(2)<---------MYB46(3)   <---------ZAT18     --------->ZAT14<---------ANAC58         <------ --------->GT1           <---------At4g35610      --------->ATHB12 ------->TEIL  --------->HSFC1(2) -----ARR14(2)           <---------ZAT2           <---------ICU4  <-----------GT1<---------HSFC1(2)-- ---->ARR14(2)           --------->ZAT2          <---------YAB1<---------------AtSPL8         <------   tccgtgaattctccttggttcaatctcagcttgaagtcccctcgagttatagtcattgcagggtaattgtaccttgcataagaagctacttcttaggctt  14831600              --------->ANAC46              --------->bZIP60(1)              --------->ETT(2)            <---------DOF5.7(2)           --------->WRKY38(1)        ------>ZmHOX2a(2)           ----------->HVH21         <------ZmHOX2a(2)           --------->WRKY12         --------->ARR11(3)         <-------GAMYB              <---------ARR11(3) --------->LBD16                            ---        <---------ANAC46            <---------ARR14(2)--------->HSFB2a(2)                     <------  ------->GAMYB       --------->ARR14(2)        <----------DOF2                             <-------- ---ANAC58 --------->WRKY45         --------->ARR14(2)<---------HSFB2a(2)                 --------->AHL20(2) --------->RAV1(1)    <---------ARR14(2)    <---------CCA1(2)------->TEIL                 <---------AHL20(2) ---ANAC58--------->DOF5.7(2)    <---------TOE1(2)   <---------LBD16                      --------->ATHB51   gcaacagtctgcgttgacgacagggattcgagtcatacgatctgccatctctttttcccgatgaatcgagtaagaagactcaacttggagaattattttt  14831700                                                                    <---------MYB46(3)                                                             --------->WRKY38(1)                                                             --------->WRKY12                                                            --------->ALFIN1                                                           <-------PIF5                                                           ------->PIF5                                                           ------->MYC2                                                           <-------MYC4                                                           <-------MYC3                                                           <-------PIF4                                                           <-------MYC2                                                           ------->MYC4                                                           ------->PIF4                                                           ------->MYC3   ---------->DOF2                                        <---------TGA1a                      <-----  <---------WRKY12                                        --------->TGA1a                    --------  <---------WRKY38(1)                                     <---------O2        <---------ARR14(2) --------->WRKY18(1)                                   ---------------->PIF3(2)<------ZmHOX2a(2) ------>MYB59                              ----------->GT1--------->O2  ----------->HVH21    <------- ---AHL20(2)        ----------->GT1       ----------->GT1------------>OsbHLH66--------->ARR14(2) ---- -YAB1 --------->MYB52(1)       --------->YAB1   --------->MYB52(1)--------->ALFIN1     --------->At4g35610   taggtcaaagaacggacttgtagggttttattagtcataaaacaggggaaaaaacggagcacgtggaccgtggttcgaccgatccaaattagctaaatcc  14831800                                                                                               <-----                                                                                               <-----                               ----------->GT1                                                -------                               <---------ANAC46                                               <------                         --------->ARR14(2)                                                   -------                       --------->LBD16                                                        -------                     <---------LBD16                                                          -------                   --------->GLK1(2)                                                   --------->DEAR3(1)         -------->P<---------ARR14(2)                         <------MYB83            <---------At4g35610      <---------MYB52(2) <---------ARR14(2)     ----------->GT1                   <-----------HVH21 - ----LBD16--------->MYB46(3)<---------YAB1    ---------->DOF2 <------MYB46(1)     <-----------TGA1  - ->ARR14(2)      --------->KAN4(1)       ---------->DOF2 <---------TOE2(3)       *TSS --------->At4g35610 --ARR14(2)      <---------KAN4(1)    <---------TOE2(3) --------->DAG2   --------->ZAT14      <------ ----->LBD16    ------------>CBF    ---------->DOF2    ---------->DOF2   ---------->DOF2   --------->LBD16   ggctctctactaaccaagaacaatccggttatgatgtataaaggaaaggaaagtagataaaggaaggtgagccactaaagtcatcgtcacctccgtagct  14831900          <-----------HVH21         <---------RAP2.6(3)         <---------SPL7                                                                         -----        <---------ANAC58                                                                       <-----    --------->ATERF1(1)                                                                        ------    <---------MYB52(1)                                                                         <-----   <-------GAMYB                                                                            ---------  --------->DEAR3(1)                                                                        ---------  <---------MYB46(3)        ----------->GT1                                                <-------PIF5 ----ANAC58              <----------CDC5                                                   ------->PIF5 ----ANAC58             <---------At4g35610                                               <---------ATERF1(1) -->At4g35610          --------->DEAR3(1)                                                ------------ ---At4g35610       <---------ALFIN1                                                  --------->DEAR3(1) -->HSFC1(2)        --------->AtMYB61                                                --------->At4g35610 -->ZAT2<---------ANAC58--------->At4g35610            <---------MYB52(1)            --------->ATERF1(1) -->HSFB2a(1) --------->At4g35610          <---------ANAC58                          <---------At4g35610 -------->LBD16    --------->MYB46(3)      <---------ANAC58         --------->ETT(2) --------->HSFC1(2) ----->NtERF2 <---------At4g35610       --------->ARR14(2)          <---------ETT(2) <---------HSFC1(2) ---HSFC1(2)<-----------RAV1(2)         <---------ARR14(2)         <------NtERF2  ---------->DOF2<---   tccgccgttgccgttcagatgaccaccgctgagttaaatccatttccgtctcgctccgtttttctcggtgtcgacgttggcactggaagcgcccgtgccg  14832000    ------>ZmHOX2a(1)                                                         --------->ATHB12 ---->LBD16                                                                  <---------YAB1 ----ATERF1(2)                                                             --------->YAB1 --->ATERF1(2)              <---------ARR11(3)                            --------->ICU4 ----ANAC46                 --------->ARR11(3)                    <---------ANAC58 >ALFIN1            --------->LBD16                               <---------ANAC46 -->HVH21          --------->LBD16                                <---------ANAC58--------->ATHB12 >OsbHLH66        --------->LBD16                                <-------TEIL--------->ICU4 <-------- ------MYB52(1)  <---------LBD16                               <---------GLK1(2)<---------WOX13(1)   gtaatccttctgtcttattccccgagttaaaatctcgtcaattttgaaaaattgtagtcttcttagattcgtgagaatgatgattgatttagtggcgatg  14832100  Previous    Next  AGI:  At4g30300.1    Description:  ATNAP15 (Arabidopsis thaliana non-intrinsic ABC protein 15). Identical to Non-intrinsic ABC protein 15 (NAP15) [Arabidopsis Thaliana] (GB:Q9M0D0); similar to ATRLI2 (Arabidopsis thaliana RNase L inhibitor protein 2) [Arabidopsis thaliana] (TAIR:AT4G19210.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63739.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65893.1); contains InterPro domain ABC transporter related; (InterPro:IPR003439); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593) Range:  from: 14831011    to: 14831556    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g30310.1    Description:  ribitol kinase, putative. similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ62279.1); similar to putative ribulokinase [Oryza sativa (japonica cultivar-group)] (GB:BAD27990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43285.1); contains InterPro domain Pentulose kinase (InterPro:IPR006003); contains InterPro domain Carbohydrate kinase, FGGY; (InterPro:IPR000577) Range:  from: 14831881    to: 14835172    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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