Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             --------->LBD16          --------->LBD16         --------->HSFB2a(2)                                     <------ZmHOX2a(1)         <---------HSFB2a(2)                                 --------->TOE1(2)         <---------LBD16                                     --------->TOE2(2) --------->ANAC46                                          --------->GLK1(2)           ---------->DOF2 --------->ANAC58                  <---------YAB1         --------->YAB1          ----------->GT1 --------->ANAC58                  --------->ICU4<---------AHL20(1)               <---------MYB46(3) <---------O2               ---------->DOF2      --------->AHL20(1)     <---------AHL20(2) --------->ARR14(2) --------->O2       --------->ANAC58             <---------ARR11(3)     --------->AHL20(2) <---------ARR14(2) ---------TOE1(2)   --------->ANAC58--------->YAB1       <---------ATHB12     <---------YAB1     <---   cccacgtagttcccggagacttaagctacacaaagtcatcataaacaccaaaatattcaataatctaggacgaataaaatatgtttgttaaaagaactgc  14826700                                                      ----------->HVH21                                         <---------At4g35610                                         --------->At4g35610                                         ----------->RAV1(2)                                         <---------ZAT2                                         --------->ZAT2                                           ---                                       <-----------RAV1(2)                                        === <---------TOE2(3)              <---------At5g28300<---------LBD16     ------->TEIL               === -------DOF2  <---------ANAC46 <-----------GT1   -------->P    <-------TEIL    <----------DOF2  -----   tttgagattgtatgtgacttacatagaatgttgttactgttccagctgagttaccagggacaagtttcatttgaacctcggctttgccatagagaaactc  14826800                          --------->ARR14(2)                                            --------->ANAC58                          <---------ARR14(2)                                            --------->ANAC58                         <------ZmHOX2a(1)                                           --------->ATERF1(1)                     --------->LBD16                                                 <------NtERF2                    <-----------RAV1(2)                                              <---------MYB52(1)                    <---------HSFB2a(2)                                        --------->MYB46(3)                   ------>ZmHOX2a(2)                                           --------->ANAC58  ----                   =============HOX2a_HOX2a                                    --------->ANAC46  ----                  ==============HOX2a_HOX2a                                    --------->ANAC58  <---                 <XXXXXXXXXXXXXXXXXXXXMIR162A/B                               <---------LBD16   <----                 <---------ARR14(2)                                     <---------DAG2<---------ALFIN1             <---------LBD16                                          ------->TEIL  <---------RAP2.6(3)   <------MYB83  --------->ARR14(2)                                --------->ANAC58 <-----------HVH21   <------MYB46(1)<------ZmHOX2a(2)                              <---------ANAC46   <---------ATERF1(1) <--------P --------->MYB52(1)                                 <-----------HVH21--------->DEAR3(1) --->ZmHOX2a(1) <---------ARR14(1)                  <----------DOF2--------->ANAC58<---------ATERF1(2) =========================HOX2a_HOX2a             --------->HSFC1(2) <---------ALFIN1----------->HVH21 ========================HOX2a_HOX2a         --------->CCA1(2)<-----------RAV1(1)  --------->ATERF1(2) ------>RAV1(2)--------->LBD16  --------->ETT(2)  <---------HSFC1(2)<---------ZAT18--------->RAP2.6(2)   ctggttggactgaaaaccggatccagaggatttgtcgagcgagagagatagaagctttccatctctgtcgcgcacctttccacggccgtcaccccaatgt  14826900                        --------->LBD16                      <---------LBD16                    -------->P                    --------->MYB52(1)                 <---------HSFB2a(1)            ------>NtERF2                 --------->At4g35610            --------->LBD16                 <---------At4g35610            <---------RAP2.6(3)                 --------->HSFC1(2)            <---------ANAC46                 --------->HSFB2a(1)           --------->RAP2.3(2)            <---------HSFB2a(2)                <---------------AGL15        <----------DOF2--------->ANAC58        --------->RAP2.6(2)     --------->ARR11(3)--------->ANAC46        --------------->AGL15     <---------ARR11(3)--------->ANAC58       --------->RAP2.3(1)                                <--- --->TEIL   --------->HSFB2a(2)               <---------LBD16                              ---------- ----->ARR14(2)  <---------HSFC1(2)     <---------GLK1(2)  --------->YAB1                --------->ANAC58 ------ARR14(2) --------->ANAC58  <-------TEIL----------------->AGL1   --------->ANAC58  --------->ANAC58 -----CCA1(2)   --------->ANAC58 --------->AtLEC2 ---------->DOF2      --------->ANAC58  --------->ANAC46   atctgaacatctttgtggaagctacccgcatagacatgcatagattgtgccgcaaagagaaacataatcaagaacgcaaaacttgtaccacaagaaagct  14827000                                                                             <-----------TBP          <---------AHL20(2)                                         <---------O2         --------->ARR11(3)   <---------ARR11(3)                     --------->O2   <---------ZAT6 ----TEIL<---------AHL20(1)   --------->ARR11(3)       <------------CBF      --------->AHL20(2) >DOF2   <---------ARR11(3)  <---------GLK1(1)       *TSS          ----------->RAV1(1)            ---   tcatttttgtatatattttggaggtgtattgatatctcaaatgtattgttgatgaaaaattgagttaagcgacatgagtttatatagtgtttggaaatgg  14827100                                                                                     <-----------GT1                                                                                   <-------GAMYB                                             <---------ANAC46                     <---------MYB46(3)                                             --------->At4g35610                 <--------P                                        <---------ANAC58                        <-------GAMYB                                 --------->AHL20(2)                            <---------MYB46(3) <--                 <---------HSFC1(2)     <---------ANAC58                     <---------ANAC58     ---   ---------->DOF2  <-------TEIL<---------YAB1                               <---------ANAC58    ==== ------->DOF2    --------->HSFC1(2)     <---------ANAC46                     <---------ANAC46    ----   caaaggaaagagagaaggaagtttcatgggtttgattatttatcgtgggctgtattctagttggctcattagacctcttgctggttgttacaaattgaaa  14827200       <---------ARR11(3)                                                                     <------       --------->ARR11(3)                                                          <---------LBD16   ---------->DOF2                                   ------->TEIL                --------->PCF2  --------->AHL20(2)                     ----------->GT1                         --------->PCF5    <- <---------ATHB12                      ----------->GT1                           <---------TCP20  --- -------------AGL15                 --------->MYB52(1)                    ------->MYC3        ------- ------------>AGL15               <---------------AGL15                   <-------MYC3     <---------TOE2(3) =================================================MADS_MADS    <-------TEIL     <-----------HVH21<--- ------------->AGL3            <-----------GT1    ----------->GT1   <---------CCA1(2)--------->LBD16   ccaataaaagataatttcattactcgtttattgttacaaaacagagaaaataatgtatatagacattcgtatatcacatgctggtcccgcgttgagatta  14827300                                                                                    <-----------GT1                                                                                <---------AHL20(2)                                             --------->DEAR3(1)                 --------->AHL20(2)                                            --------->ANAC46          <---------AHL20(2)    --------->ZAT6                         ------>NtERF2             <---------AHL20(1)    <---------ALFIN1                      --------->ANAC46           --------->ARR11(3)         ----- ---YAB1                                  <---------ALFIN1           <---------ARR11(3)        <----- ----------GT1                           --------->MYB46(3)          --------->AHL20(1)      -------- ------>YAB1           --------->YAB1    <---------MYB55(2)          --------->AHL20(2)     <-------- -->ICU4  <----------DOF2       <---------ARR14(2)      <-------TEIL--------->AHL20(2) <----------DOF2 ------YAB1     <----------DOF2 --------->ARR14(2)  <---------TOE2(3)<---------AHL20(2)<---------DAG2   ttatcaacactgctttgactttcaaacatgagcgtaaaccctccccaccgcatagaggttcgaatgacaaatatatttgcattttaatactttttttcct  14827400                              <-----------GT1                             --------->AHL20(2)                    --------->ATHB12  <---------AHL20(2)                              ------>ZmHOX2a(1)         <-----------GT1<---------AHL20(2)                            <---------YAB1 --------->TOE2(3) <-----------GT1--------->ATHB12      --------->AHL20(2)             --------->AHL20(2)             - ->ZmHOX2a(1)  --------->AHL20(2)   --------->YAB1   ------>ZmHOX2a(1)<---------AHL20(2)       ------ ----MYB59 <---------YAB1   <---------AHL20(2)      --------->TOE1(3)<---------AHL20(1)       ------- -->ID1<----------DOF2  --------->AHL20(2)          --------->TOE2(3)<---------AHL20(2)       <------ ---GT1<---------DAG2  --------->AHL20(2)          <---------ICU4    --------->AHL20(1)       <------   aattaacaactttacgatttattgatttaatttaactaaaataaatgttctaatccttagataaacaccaatataatggcaaagtttcctaaaacttagg  14827500                                                                           <----------DOF2                                                                    --------->AHL20(2)            <--                                                                    <---------YAB1                --- ---------->GT1                          <---------AHL20(2)         <---------AHL20(2)            --- --->ANAC55(2)                          --------->AHL20(2)         <---------AHL20(1)             <-- -->MYB59                               <---------AHL20(2)         --------->AHL20(1)            ---- ---TOE2(3)                      --------->YAB1                   --------->YAB1            ------>ZmHOX2a(2) ---TOE2(2)                    ------->TEIL     <---------At4g35610--------->AHL20(2)      <---------GLK1(1)   tattgaaaaatagctacaagttttccatagttgaatcttgattttaatttggctgatagtcttgtcaaatataatttcttttggttttaatcgatctccc  14827600  Previous    Next  AGI:  At4g30280.1    Description:  ATXTH18/XTH18 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 18); hydrolase, acting on glycosyl bonds. Identical to Probable xyloglucan endotransglucosylase/hydrolase protein 18 precursor (XTH18) [Arabidopsis Thaliana] (GB:Q9M0D2); similar to ATXTH17 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 17), hydrolase, acting on glycosyl bonds [Arabidopsis thaliana] (TAIR:AT1G65310.1); similar to xyloglucan endotransglucosylase/hydrolase 2 [Cucumis melo] (GB:ABI94062.1); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); contains InterPro domain Glycoside hydrolase, family 16, active site; (InterPro:IPR008263); co Range:  from: 14825814    to: 14827053    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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