Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             --------->At4g35610        ---------->DOF2      --------->ANAC58      --------->ANAC58                                  --------->ANAC58    --------->MYB52(1)                                  --------->ANAC58                            < ----->LBD16                                  ----------->GT1                                   ----- ---->LBD16<---------At4g35610               ----------->GT1                                 <------- ---->ANAC46                                <---------TOE2(3)                            ------->TEIL --->HSFB2a(2)                              --------->DAG2                              ------------>MYB.PH3(1) ----HSFB2a(2)                            ---------->DOF2                             <---------ATHB12 ---------->AGL2   ----------->GT1<----------DOF2       ----------->GT1     --------->YAB1 ----------   gaaacagaacgaaagctgaaaatgtgaaacgtctctcttttgcaaaaaggttaaaaacaagaaaaattcgatttcatatcaaaattcaatgaaccgttac  14711200                     --------->ANAC58           ---------->DOF2                     --------->ANAC58  --------->MYB46(3)                  <---------ARR14(2)             --------->HSFC1(2)      ----------->RAV1(1)           --------->ANAC46             <---------HSFC1(2)<---------ARR14(2)               <---------ARR14(2) ---------ICU4     ---------->DOF2  <----------ID1              --------->ARR14(2) ---->ZAT6   --------->HSFB2a(1)  --------->ANAC58             <----------TaMYB80 --MYB52(1)  <---------HSFB2a(1)  --------->ANAC58  <---------ARR11(3)     --------->ARR14(2) ->GT1     <---------GLK1(2)   --------->ARR14(2)   --------->ARR11(3) --------->ZAT14   --------->MYB52(1)   actcatttctacagaattttccaaagcaatgcaggtatgcaacaaatatcaaaagacctcttctcatattcgctacagttcttcataaacaaaactgaag  14711300                                                      <----------DOF2<---------TOE2(3)                                                     --------->TOE1(3)                                 ---------->DOF2     --------->TOE2(3) ------->GAMYB                          --------->YAB1     ----------->GT1        ---------->DOF2                 -                    --------->At4g35610     --------->DAG2          <---------DOF5.7(2)      --------     --------->LBD16<---------At4g35610   ---------->DOF2         --------->DOF5.7(2)   <----------DOF2   aaatacccagaaaacaaaattcagctaatcgtagagaaagttcaaaaaggctaaacctttacattgacattaacgctctaaatttgcagacttttgaaag  14711400               ----------------->AGL1         <---------ZAT2                           --------->SPL7        --------->ANAC58                         --------->SPL1(1)                  --------->ANAC58  --------->TOE2(2)                             --------->TOE1(2) --------->At5g28300  --------->TOE1(2)                             <---------SPL7  <---------DEAR3(1)  --------->ANAC58  <---------LBD16                    <---------ZAT6   ---------->DOF2 <---------ARR14(2)            - ----------->RAV1(2)       --------->DAG2     --------------->AtSPL3  --------->ARR14(2)          <-- -------->GLK1(2)         --------->DAG2     ------->TEIL--------->At4g35610     <---------MYB52(1) = -->DOF2--------->ANAC58 ---------->DOF2    <-----------GT1  <---------ARR14(2) <-------GAMYB     ---   aaaacctgggaagctaggcccaaatcgaaaagggtaagagtgttatgaaccgtacgaagagcagagacggtggatttgagttcgttaagcaaatggtttt  14711500                                      <---------HSFB2a(1)                                      --------->HSFB2a(1)                                      <---------HSFC1(2)          >>>>>>>>>>>>>>>>>LFY        --------->HSFC1(2)          ------>NtERF2          >>>>>>>>>TBF1                                               -------- ----->ZmHOX2a(2)             >>>>>>>>>TBF1                                         ---------->DOF2 -------ARR11(3)          <------ZmHOX2a(1)                               <-------GAMYB <----------ID1 ================================HOX2a_HOX2a                 --------->ANAC58 <---------ANAC46 ------>ARR11(3)        <---------TOE2(3)                    --------->ANAC58 <---------ANAC55(2)  --   gatctccattgcagccattgttctctgaggaagaagaagaagcttctccatttccagtgaatgaagcaatttggagcgttacgagaaaaagaaacaaaag  14711600               <---------ICU4               --------->ATHB12               --------->ATHB51               -------->ATHB1              <---------YAB1              --------->ICU4              <---------ATHB51            <---------------AGL15           <-----------------AGL3     <----------DOF2         --------->ANAC58          <------ZmHOX2a(1)         --------->ANAC46         <---------ZAT18                                                ---- -->DOF2 --------->ANAC58      ------->GAMYB  <---------SPL7        --------->ZAT18            <----- ------->At4g35610          ----------->RAV1(1)        ---------->DOF2       <-----------------------TaNAC69(2)   tagcttaaaaaacgccattattggagactgcaacagaggactttgcacagtacgagagaaagagagagagagcgcgagtcgcgagagagagacagagact  14711700                                             <---------ANAC55(2)                                             --------->ANAC55(2)                                           --------->AHL20(2)                                           <-----------GT1                                        <---------ICU4                                        <--------HAHB4        --------->ANAC58                --------->YAB1        --------->ANAC58               ----------->TBP                           --------->ANAC46    --------->SPL7                     <---------AHL20(2)        <---------YAB1--------->MYB52(1) <---------ANAC55(2)                   <---------YAB1         <----------DOF2  <-----------GT1 ----->MYB52(1)              --------->ARR11(3)          <----------DOF2     ----------->TBP ----MYB52(2)   ---------->DOF2 <----------DOF2      ---------->ID1  --------->AHL20(2)   aacgcgtaccaagtcaaataaagggtcttactatcttttctataattacatatttgtctctttacttttgataaattctataaacggcccaaataagttt  14711800                                                                          <---------MYB59                                                                     --------->DAG2                                 --------->AHL20(1)                 ---------->DOF2                   <-----------HVH21                              --------->LBD16               --------->DAG2    --------->ARR11(3)              --------->ANAC46       --------->At4g35610             ---------->DOF2     <---------ARR11(3)          <---------CCA1(2)          <---------At4g35610       <---------YAB1           --------->RVE1(1)          <---------ANAC58------>ZmHOX2a(1)   <---------GLK1(2)------------>CBF          --------->ANAC58<---------ARR14(2)   --------->TOE2(3)   <---------ARR11(3)           --------->CCA1(1)          <---------ANAC58--------->ICU4   --------->ARR11(3)  <------------CBF       --------->ANAC58--------->ARR14(2)   --------->TOE1(3)   gtatagattttgatgaaaaggtgtcaattgaaaaatatcttatgcaaaacgcctaatttaggcgtatccgaaaagtcctaattagccttaatctgactct  14711900                           --------->CCA1(2)    --------->AHL20(2)               ---------->ID1  <---             <---------MYB52(2)          --------->TOE2(3)             --------->ZAT14           ----   --------->TOE2(3)     <------ZmHOX2a(1)  --------->AHL20(2)         <---------ZAT14     --------->ZAT14   --------->YAB1       ----------->GT1 ----------->GT1               <---------ANAC46 <-----------GT1 --------->ARR11(3)--------->ANAC58    <---------TOE2(3)       >>>>>>>>>>>>>>>>>LFY <----------DOF2 <---------ARR11(3)--------->ANAC58   --------->YAB1    <---------AHL20(2)      <-----------GT1<-----   taaaatcttaatgcaactaaaacggaaggatataaacttataatgttaaaatatatgttttaatggtccattgtgtagtatttttccttttacttcacac  14712000                                           ----------->GT1                                         <---------ANAC46                             --------------->AGL15                                       --------->At5g28300                             <---------------AGL15                   --------->TOE2(3)  ----------->GT1                            <-----------------AGL3      --------->ARR14(2)       <---------AHL20(2)                      <----------DOF2   <-----------------------TaNAC69(2)       --------->AHL20(1)               --------------------->WRI1<---------ANAC58       <---------DAG2  --------->AHL20(2)       <---------TOE2(3)    <-----------------AGL2      --------->ARR11(3)      --------->ATHB51 ----MYC3<---------GLK1(2)  ----------------->AGL3      <---------ARR14(2)      <---------AHL20(2) <- --->MYC3<---------ICU4   <-----------GT1<---------ANAC58 <---------ICU4        <---------ICU4     <- ----TOE1(2)<-----------GT1 ----------------->AGL2<----------ID1<----------DOF2--------->ICU4      --   gtttttgttaagaatttccttcttctttttgccatatatagttgcttgtaaaaaaacaaatcttgactttttcttaaactaattattttgctgtaaatat  14712100  Previous    Next  AGI:  At4g30090.1    Description:  EMB1353 (EMBRYO DEFECTIVE 1353). similar to myosin heavy chain-related [Arabidopsis thaliana] (TAIR:AT4G31340.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43958.1) Range:  from: 14708718    to: 14711618    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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