Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           <-------TEIL                                                                                        --------->CCA1(2)                                                                                       <---------ARR14(2)                                                                                    <---------ANAC46                                                                                   <---------LBD16                                                                               <-----------RAV1(1)                                                                               <---------AtMYB61                                                                               --------->ALFIN1                                                                             --------->ALFIN1                                                                           <---------ANAC58                                                                 --------->ALFIN1 <---------ANAC46                                                               --------->CCA1(2)  --------->ALFIN1                          <XXXXXXXXXXXXXXXXXXXXMIR167A/B      --------->ARR14(2) <---------SPL7                        <------MYB46(1)                       --------->ARR11(3)<---------ANAC46                    <---------ANAC58                          <---------ARR14(2)<---------ANAC58                    <---------ANAC58                      ---------->DOF2  <---------ANAC58                    <---------ANAC46               <---------ANAC58        <---------ANAC46             <---------LBD16         --------->HSFC1(2)<---------HSFB2a(2) <---------ANAC55(1)        --------->DAG2  <------MYB83 <---------HSFC1(2)--------->HSFB2a(2) <---------bZIP60(2)     <-       ---------->DOF2 <---------AtMYB61           <---------ANAC58   <---------AtLEC2 --------->ARR14(2) ---------ZAT6<------NtERF2 --------->ARR11(3) <----------DOF2--------->ARR11(1)<---------ANAC58   <-   tggtgttagaaaagtcgcggtagcgtaggtgatattggcagtttccagtcttttcgtcgcgaaagatttggggcatggcgtgtggtgcggatacacaaga  14683100                             ----------->GT1                            --------->ALFIN1                   ------>ZmHOX2a(2)                  <------ZmHOX2a(2)                                                     <---------ZAT18                 <---------AGP1                                                       <------MYB83                 <---------ARR14(2)                                                   <------MYB46(1)                 --------->ARR11(3)                                                  --------->MYB46(2)                 <---------ARR11(3)                                                  --------->MYB59                 --------->ARR14(2)                                           ------>ZmHOX2a(2)       <--------P<---------ARR14(3)                          <---------AtLEC2<------ZmHOX2a(2)      <---------MYB52(1)  ----------->GT1       <---------ANAC46            --------->ARR14(2)     -- --------ANAC58  --------->ARR14(3)--------->DAG2     ----------->ARR10     <---------ARR14(2)    <-- --------ANAC58----------->ARR10  ---------->DOF2 ----------->GT1           ------->TEIL--------->ZAT18   agcgtttcggtaagtggaagatcttgaagggtggaaaaaagggattgtttgagggtaacatttgcagggaagacaatggatccaagttaggtcactacct  14683200                              <---------WOX13(1)                              <---------GLK1(1)                             <---------ANAC58                                                  <-----                             <---------ANAC58                                        <-----------HVH21                      <-----------RAV1(2)                        <---------GLK1(2)  =================                   ----------->HVH21                             --------->ARR14(2) <---------TGA1a                  --------->LBD16                           --------->ZAT2          =================                 <---------ANAC46                           --------->At4g35610     --------->O2                 <---------ANAC58                           <---------ZAT2          <---------O2                 <---------ANAC55(2)                        <---------At4g35610   <---------bZIP60(2)                 --------->ANAC55(2)               --------->ANAC58               <---------ANAC46                 <---------ANAC58                  --------->ANAC58            ----------->HVH21    - ----->TEIL     <---------LBD16                    --------->ANAC46         <------ZmHOX2a(1)  <----- -------CCA1(2)--------->ALFIN1                  <---------AtLEC2<---------ARR14(2) --------->TGA1a -   gtatctatgagtaagagttgcgggacaggtggattgccgatagaaatatttgcaaggaatgctgctggattcggaataggagtgacatgtgagacggtcc  14683300                            <---------ANAC46                          <---------WRKY18(1)                         --------->WRKY38(1)                         --------->WRKY12          <---------YAB1                        <--------P             <---------GLK1(2)                       <-------GAMYB        <------------MYB.PH3(1) ----ETT(2)           <---------MYB46(3)  <-----------GT1 ================================MYC_MYB  --------->MYB52(1)                                  <------NtERF2 ==============================MYC_MYB  <---------MYB52(2)                                  <-------- -------->ANAC58  --------->ALFIN1     --------->ANAC46              <---------TOE1(2)  --------->SPL7 ----ZAT18        <---------ANAC46     --------->ANAC58         <---------YAB1       <---------ANAC58 -------->ANAC58--------->GLK1(2)      --------->ANAC58      <---------YAB1          <---------ANAC58   acaagttatctaggcgagaagcgggggttgacttggaatgcaagtaaccgattttgattttcgatgattcttgggttttggttcttagcgtaagtcggga  14683400                                                                --------->MYB52(1)                                                             <---------ANAC55(2)                                                             --------->ANAC58                                       -------->HAHB4        --------->ANAC46                                       --------->YAB1        --------->ANAC55(1)                                      <---------YAB1         --------->ANAC58                                      --------->ICU4         --------->ANAC55(2)                                    --------->YAB1        --------->ARR14(2)                                   <---------AHL20(2)     <---------ARR14(2)                                  --------->AHL20(1)   --------->ANAC58      <-------TEIL                <---------AHL20(1)   --------->ANAC58  <---------ZAT14 -LBD16      <----------DOF2      --------->AHL20(2)<------NtERF2  --------->YAB1                   -   atgcgaggtgcattcctttgaacaagtgagagcgaatataatgataagaagggaggcacgaatacgtaatggtagtagagtgatggccatttgataatca  14683500                                                                              <---------ANAC58                                                                              <---------ANAC55(1)                                                                              --------->ANAC55(2)                                                                              <---------ANAC46                                                                              <---------ANAC58                                                                              <---------ANAC55(2)                            <---------YAB1                            <----------DOF2                      ----------->TBP                                 <---------DAG2                      --------->AHL20(2)                          <---------ZAT14                    <----------DOF2                            <---------ANAC46                    ------>ZmHOX2a(1)                      <----------DOF2   <---------TOE2(3)                   --------->TOE2(3)                     <---------DAG2     <-----------GT1  <-------             ------------>CBF                   <------------CBF  <---------ZAT18 --------->ANAC58 -------->GLK1(2)<---------ATHB12  ---------->DOF2 --------->YAB1 --------->ZAT18 --------->ANAC58   agaatgtggttttcttccaatcctttaaatatgagtctaaagaagaatggcattgatcactctttgtgtgaactttttttacgtatgcaaggtttctttt  14683600                                                                                              -------                                                                                              <------                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                             ========                                                   <---------AHL20(2)                     -----------                                                   <---------AHL20(1)                  ------->TEIL          <---------WOX13(1)                       --------->AHL20(1)         --------->DOF5.7(2)         <------------CBF                         --------->AHL20(2)         --------->TOE1(3)<------       <-------TEIL                           <---------YAB1                 --------->TOE2(3)-------    --------->ATHB12                       ------>MYB46(1)          =================================   <---------YAB1      --------->ZAT6      ------>MYB83    --------->STY1(2)<---------ANAC46 <------- --------->YAB1  <-----------GT1          --------->WOX13(1)        ---------->DOF2   <---------CCA1(2) ---DOF2--------->ATHB12                ------------>CBF   <---------STY1(2)<---------ANAC55(2)   ctagcatgattcattgattttactaacacaacttcaacacataccaatctgattatattctagctaggcaaaaagattacgttaatgtgtatctcacgtg  14683700   <---------ZAT14 >MYC3 -MYC2 --ANAC55(2)                                                                     --------->YAB1 ->TGA1a                                                                         xxxxxxxxxxxxxxxxxxxx --TGA1a                                                                        xxxxxxxxxxxxxxxxxxxxx --ANAC46                                                                   <---------GLK1(1) ->ANAC55(2)       --------->GLK1(1)                                       <---------ARR11(3) ->O2              --------->CCA1(2)                                       --------->ARR11(3) ======================================MYC_MYB                       ------------>CBF >HVH21           --------->ARR11(3)    <------------CBF        <---------AHL20(2)     --------->YAB1 -MYC3  --------->ZAT14               --------->AHL20(2)        --------->AHL20(2)     <xxxxxxxxxxxxx >MYC2  <---------ZAT14         <---------MYB52(1)     <------------CBF   --------->YAB1--------->TOE2(3) ==bZIP_DOF       <---------ARR11(3)  <---------AHL20(2)      <-----------TBP------>ZmHOX2a(2) --O2  <---------ZAT6          <-------GAMYB          --------->ATHB12   <---------ATHB12 ---------->DOF2   tttagtctagtgtagaataagatatcaaaactctgttgattttattgattcacaaactattggtatttatatacaatgatctctgataaacataaatccc  14683800                                                 <---------CCA1(1)                                                 <---------RVE1(1)                                            ------>ZmHOX2a(1)                                           --------->TOE2(3)                                           --------->TOE1(2)                                        --------->ARR14(2)                              --------->AHL20(1)                                        --------->GLK1(2)                               <---------AHL20(2)                                        <---------ARR14(2)                              <---------YAB1                                <---------------AtSPL8  --------->ARR11(3)       --------->ANAC58                                <---------------AtSPL3  <---------ARR11(3)       --------->ANAC58             <-----------GT1 --------->ARR11(3) <---------AHL20(1)         --------->At4g35610         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)   --------->ARR11(3)       --------->MYB46(3)      ----------->GT1        --------->AHL20(1) <---------ARR11(3)      ------>MYB46(1)--------->AHL20(2)     <---------TOE2(3)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     --------->MYB52(1) xx>smallRNA(i2)             <---------ARR11(3) --------->AHL20(1)     ----------->RAV1(1) x>smallRNA(si3)            --------->YAB1 --------->TOE2(2)    <---------ICU4   --------->ANAC46 xxxxxxxxxxsmallRNA(si3) ---------->DOF2------->TEIL   --------->RVE1(1)------>MYB83   --------->YAB1   taaaatataggttataaactctatcaccaaagatattgtacgaatcctaagatattaatatctcaagaattaccaacagctaaacgaaataatattgttt  14683900        <xxxxxxxxxxxxxxxxsmallRNA(s)      ----------->HVH21                                --------->DAG2   <---------ANAC46       ---------->DOF2     --------->At4g35610   <---------ANAC58<---------AHL20(2)       --------->YAB1     --------->ANAC46 <---------KAN4(1)----   <---------ANAC58<---------YAB1    --------->ZAT6   ---------->DOF2   --------->ATHB12<---------MYB52(2)   acatcgcttggacaggtctatattattcaaaagaaattagcactaatcagaagaaaaaaagtttcaaacaacactgatttgaataatccaactaaacaat  14684000  Previous    Next  AGI:  At4g30030.1    Description:  aspartyl protease family protein. similar to aspartyl protease family [Arabidopsis thaliana] (TAIR:AT4G30040.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62311.1); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007); contains InterPro domain Peptidase A1; (InterPro:IPR001461) Range:  from: 14682216    to: 14683490    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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