Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       --------->ARR14(2)                           <----------DOF2           <---------ARR14(2)                        <---------ALFIN1          --------->YAB1                     --------->ANAC46            <------ZmHOX2a(2)                 --------->AtLEC2               <---------ARR11(3)             <-----------TGA1             --------->MYB52(1)            <---------ANAC58              <---------DOF5.7(2)            --------->ANAC55(2)         --------->DOF5.7(2)                            <----------DOF2            <---------bZIP60(1)        --------->TOE2(3)                              <---------DAG2            <---------ANAC58           --------->TOE1(3)                            ------->TEIL            --------->bZIP60(1)        <-------GAMYB<---------CCA1(2)     <-----------------AGL3            <---------ANAC46          ------>ZmHOX2a(2)         --------->YAB1     <-----------GT1            <---------ANAC55(2)     --------->ARR11(3) ----------------->AGL3   --------------->AtSPL8 ------->TEIL<-----------HVH21      <---------ARR11(3) =====================================MADS_MADS   atgaacatatagttgcgtcatgcacaacactttgtatagatcgttaacgggatcatatccaaaaaatgatactctatctatatatgaaccttttcttagt  14663500                                                                                       <---------MYB46(3)                                                                                     --------->SPL7                                                                                   --------->LBD16                                             --------->YAB1                        <---------SPL7                                            --------->MYB46(3)                     ----------->HVH21                                     <---------GLK1(1)                           <---------LBD16                                     --------->GLK1(1)                       --------->ANAC58                                    <---------GLK1(2)                        --------->ANAC58                                   <------ZmHOX2a(1)--------->ZAT14        ---------->DOF2                      --------->WRKY38(1)   <---------ATHB12              <------ZmHOX2a(2)                      ----------->HVH21   --------->WOX13(1)             --------->ARR11(3)                 <---------ANAC55(2)<---------ARR14(2)                   <-----------ARR10                 --------->ANAC55(2)--------->ARR14(2)  <-----------GT1 --------->At4g35610               <-----------GT1 <---------TOE2(1)   <----------DOF2   <---------At4g35610   ----------          ---------->DOF2      <---------TOE1(1)<---------ALFIN1     --------->At4g35610  --------->ALFIN1   tttgagtttaggcaaagttacgaattgaccagtactaggattcccaatcaacactttagtaccatttagacagcagatcaagccccggacgggtggagaa  14663600                                                                                 <---------ARR11(3)                                                                                 <---------ARR14(2)                                                                               --------->ANAC58                --------->ATHB12                                               --------->ANAC58               --------->ICU4              <---------ICU4                <---------ANAC58               <---------YAB1             <---------YAB1            <---------At4g35610             --------->YAB1               --------->ICU4            <---------ZAT2            <------ZmHOX2a(2)    -------->P--------->YAB1           --------->ZAT2           <---------ARR11(3) --------->ZAT2                        --------->At4g35610------->TEIL  <---------ARR14(2)          <---------At4g35610               --------->ANAC46 --------->ARR14(2)  --------->ARR14(2)      --------->MYB52(1)             <---------ATERF1(1)--------->ZAT18     <----  <---------GLK1(2)  ---------->DOF2    --------->YAB1  --------->PCF2   <---------ANAC58       <---- ->GT1     --------->ARR11(3) --------->At4g35610       <---------PCF5   <---------ANAC46       =====   aaccgatactctagatcatgattcaaagtaacagctaccctgtgatgatcacaagacgggccctccaaggagctggagtgcaagaactgcatcttgagac  14663700                                                    --------->REM1(1)                                                --------->At4g35610                                               <---------------AtSPL8                                               --------------->AtSPL3                                               --------->MYB59                                              <-----------RAV1(2)  <----------DOF2                                        <------ZmHOX2a(2)       --------->ARR11(3)                                       <---------ARR14(2)       <---------ARR11(3)   --------->WRKY38(1)                                       <---------ARR11(3)  --------->LBD16  =============HOX2a_HOX2a                                       --------->ARR11(3) --------->ANAC55(2)        ----------->HVH21                                 --------->ALFIN1  <-------TEIL<---------GLK1(1)     --------->WRKY12 -----TGA1a           <-----------------------TaNAC69(2)  <---------ANAC55(2) <---------YAB1 -----O2       ---------->DOF2<------NtERF2 <-----------HVH21  --------->GLK1(1)  ------>ZmHOX2a(2) =========================bZIP_DOF     --------->ARR14(2) <---------ANAC46  <------ZmHOX2a(1)   gggagactgagacttgaaaaagaagacgaggcagagtggaagatcgagtcaggtacaactccgtgatatctttgtcgaggatgatcgatgaccagtgttt  14663800                                                                        --------->ARR14(2)                                                                        <---------ARR14(2)                                                                        --------->KAN4(2)                                                                       --------->KAN4(1)                                       <---------LBD16                 <---------HSFB2a(1)                                       <-----------RAV1(2)             --------->HSFB2a(1)                                <------NtERF2                          <----------TaMYB80                               <---------RAP2.6(3)                     <---------HSFC1(2)                               --------->ANAC58                        <---------KAN4(1)                               ------>NtERF2  <---------ARR14(2)      <---------KAN4(2)                               --------->LBD16--------->GLK1(2)       ---------->TaMYB80                               --------->ANAC58                     ========================HOX2a_HOX2a                              --------->ATERF1(2)                   =========================HOX2a_HOX2a                              --------->RAP2.6(2)               --------->LBD16                              <---------ATERF1(2)              <-----------RAV1(2)                <--                              <---------DEAR3(1)               <---------HSFB2a(2)    ------>ZmHOX2a(2)                             <---------LBD16 <---------GLK1(2) --------->HSFB2a(2)  <---------ARR11(3)                             <---------ORA47(1)            --------->ZAT2           --------->ARR11(3)                       <---------ARR14(2) <------ZmHOX2a(1)--------->At4g35610      --------->ARR14(2)                       --------->ARR14(2)--------->LBD16   <---------At4g35610      <---------ARR14(2)          ----------->ARR10  --------->RAP2.6(3)      --------->YAB1<------ZmHOX2a(1)<------ZmHOX2a(2)   cgaaacgaagatgagattggctatggatttggccggcaatttcaggagaatctctatcatcagctccagaggaatattcgaaaacagatcgttttcttca  14663900                                                               <------MYB83                                                               <------MYB46(1)                                                     <---------TOE2(3)                                           <---------DAG2      ----------->GT1                                           <----------DOF2     <---------MYB46(3)                                       <---------ZAT18       <---------WOX13(1)                                     <---------At4g35610    <------------CBF           <---------AHL20(2)           <---------ANAC58          --------->At4g35610   --------->ATHB12       ------>ZmHOX2a(1)           <---------ANAC58      <---------ARR14(2) <-----------GT1    --------->TOE2(3) --------DOF2                    --------->ARR14(2)<-----------GT1     --------->TOE1(3)      <------   ctttggtcttgtttcttatccatggggagttttcagttctgctcactttttttttaacgcttgattggttaaaccctaatcgtccttatattttttgcaa  14664000                                                                                        -------->ATHB1                                                                                        <--------HAHB4                                                                                        <---------ICU4                                                                        --------->TOE2(3)                                                               --------->LBD16          --------->ATHB12                                 ----------->GT1               ------>NtERF2            --------->ATHB51     --------->TOE1(3)          --------->DAG2         --------->AHL20(2)              --------->ICU4     --------->TOE2(3)         ---------->DOF2         <---------AHL20(2)  ---------->DOF2<---------YAB1 ---AtLEC2               <---------TOE2(3)    <-------TEIL    --------->DEAR3(1) --------->At4g35610-   gtcgaaaccctaatatcaagaatttttaagaaaaaaagttaacaagggttcgcttaattaatcgccgagaaaaacgtttaagccgatgaattattagtcc  14664100                                     ------->TEIL                                --------->At4g35610                                              <---                      --------->ANAC46        <-------TEIL                                       <---                      --------->ANAC58       <---------ARR14(2)                              <-------        --------->ANAC46  ---------->DOF2   <---------SPL7                                   <-------        --------->ANAC55(1)  <---------At4g35610     --------->ALFIN1                   <---------ANAC58 ----------->CBF      --------->ANAC58    <---------TOE2(3)     <------ZmHOX2a(1)       <---------ANAC58   gatacaatacacttaacttactacaagacaaagctgatgaaactgaggttcggaagtggaacgagaggaagttgagtttgagtaatttgttcttgccttg  14664200                                                                               --------->REM1(2)                                                                              ----------->HVH21                                                                             <-------MYC3                                                                             ------->MYC3                                                                             <-------MYC2                                                                             <-------PIF5                                                                             ------->MYC2                                                                             ------->MYC4                             --------->At4g35610                             <-------MYC4                             ----------->GT1                                 ------->PIF5                            --------->RAP2.3(2)                              ------->PIF4                            >>>>>>>>>AtERF-4                                 <-------PIF4                          <---------At4g35610                               <---------TGA1a                     <------------CBF                                       --------->ANAC58                   <---------AHL20(1)                                       --------->ANAC46                   --------->ARR11(3)                                       --------->TGA1a      ----                   --------->AHL20(1)                                       --------->ANAC58  <------ ------ANAC58   <-----------TBP                                            ------->TEIL       <------ ------ANAC58   --------->AHL20(2)                                        <------------OsbHLH66 ----- --ANAC58     <---------ANAC46                                    <---------YAB1        --------->ZAT6 --ANAC58   ----------->GT1 --------->RAP2.6(2)                --------->GLK1(2)   ----------->GT1   cgagatttgtagagttgtttatatattgagccgctaaaaacacttgggctaaatattgaagctaaattctgtttatgcacgtgaagagtaatactagtgt  14664300                                             <---------ANAC46      --------->AtLEC2                       <---------ANAC58  --------->ARR14(2)                         --------->ANAC55(2)        <---------DAG2  --------->GLK1(2)                          <---------ANAC55(2)        <----------DOF2  --------->ARR11(3)                         <---------ANAC58 <---------At4g35610  <---------ARR14(2)                      ------>ZmHOX2a(1)   <---------ZAT2                  <------ <---------GLK1(2)                       <---------ANAC58     --------->At4g35610             ------- ------->GT1                             <---------ANAC58  <---------At4g35610               -------- ---ZAT6                           ---------->DOF2         ------>ZmHOX2a(1)       <-----------GT1 ---ANAC46                   <---------CCA1(2)         --------->ARR14(2)        --------->KAN4(2) ---->ALFIN1     --------->LBD16--------->TOE2(3) --------->ZAT6 <---------At4g35610   <----------DOF2   ggagaatcttgcaaaatccctgagttttagcctatctcaaagtccttgcgtaacacgattcctctgctgatgagctttttggttattcccttttatttaa  14664400  Previous    Next  AGI:  At4g29970.1    Description:  F-box family protein. Identical to Putative F-box protein At4g29970 [Arabidopsis Thaliana] (GB:Q9SZR7); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G04660.1); contains InterPro domain F-box associated type 3 (InterPro:IPR013187); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 14662771    to: 14663923    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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