Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                -------                                                                                              <------                                                                                              -------                                                                                             --------                                                                                             <-------              --------->At4g35610                                                          --------->YAB1           --------->At4g35610                                                        <---------DAG2  --------->TOE1(2) --------->At4g35610                                          <---------STY1(2)  <---------LBD16   <---------At4g35610                                  --------->ATHB12 <---------YAB1 ------->P <---------At4g35610                                      <-------TEIL --------->STY1(2) --->ZmHOX2a(1)   --------->REM1(1)                                --------->CCA1(2)  <----------DOF2   ctaaccagggactagctgctacagctaaaaccccatttgctctactatgagccctacaaatcccaatagatacaatgagtgctagctactttataatgat  14605400                                                                                             --------                                                          --------->At4g35610                --------                                                          <---------At4g35610                <-------                                                   --------->ZAT14                         <---------      ---------->DOF2                              --------->ZAT18                       <-----------HVH21 ->HAHB4                                  --------->At4g35610                  ------>ZmHOX2a(1) ---ICU4                              ------>MYB83 <---------ZAT14            --------->TOE2(3) -->YAB1                  --------->YAB1--------->YAB1   --------->ALFIN1     --------->TOE1(3)------ ->ICU4          --------->AHL20(2)   --------->AtLEC2<---------DEAR3(1)   <---------ARR14(2)-------- --YAB1      --------->AHL20(2)       ------>MYB46(1) --------->ANAC46     --------->ARR14(2)<-------   cacaaaaacaaagaattaaaaaaatcaaaaatcacaaaccaagcagaagaaactgcacggtgctgaatagtatcccaaatcctcaactctccatcagctg  14605500                                     <---------YAB1                                   --------->YAB1                                  <---------YAB1                                <---------ICU4                                                   <--- ->ZAT2                         --------->YAB1                                                   ---- ->At4g35610                   <---------ATHB12                                               ------- --At4g35610                 ------>MYB46(1)                                                 -------- --RAV1(2)                   ------>MYB83--------->AHL20(2)               =========================== ----->HVH21               <---------MYB111(1)                 <---------GLK1(2)   --------->CCA1(2) --->RAV1(2)              --------->ANAC58         --------->AHL20(2)     <---------TGA1a    <------- --ZAT2  ---------->DOF2  --------->ANAC58         <---------AHL20(2)     --------->TGA1a   ---------   aactggagaaacaaagcttcaattttgcaccaaatcatcataaataaaaacaataaatgactcgagaatttctcacaagtgagagagacgactaattaat  14605600                       <---------YAB1                        ------>NtERF2                  <--------     ----------->GT1--------->GLK1(2)                        <---------ZAT18               <------NtERF2  --------->ANAC46 <---------GLK1(2)                  ----------->TGA1                     --------->ATERF1(1) ------AHL20(1)    --------->ARR11(3)       --------->TOE2(3)--------->ABI4(2)           --------->ALFIN1 ----->ARR11(3)    <---------ARR11(3)      <-------TEIL--------->MYB52(1)                <---------DEAR3(1) -->AHL20(2)      <---------RVE1(1)    --------->HSFC1(2)<---------DEAR3(1)             <---------LBD16 ->AHL20(2)      ----------->ARR10     <---------HSFC1(2)<---------bZIP60(2)         <-----------RAV1(2) ====================bZIP_DOF      ----------->GT1    ----------->HVH21     --------->MYB46(3) --AHL20(2)--------->DAG2  <---------MYB46(3)  --------->MYB52(1)  ---------->DOF2  <------ZmHOX2a(2) >AHL20(2)---------->DOF2 <---------WOX13(1)--------->YAB1 --------->ATERF1(1)     <-----------HVH21   atatacccagtgaaaagcagagattttgatggatggaaggaaacatccataacagagtgacggtgccctctaagcacagccactggatcaggcggaggtc  14605700                                  ------>MYB83                                  ------>MYB46(1)                                <---------MYB59                 --------->ANAC46                          --------->ANAC46                      --------->ANAC58                       --------->ZAT14                          --------->ANAC58             <-------      <---------CCA1(2)<---------ZAT14                  ------>MYB46(1)       <---------ARR14(2) -AtMYB61         --------->MYB46(3)      <---------YAB1------>MYB83          --------->ARR14(2)  ---   tcttactcatctctgattcaactactacacaaaaccaaactcttgtaatagagaaaccaagcgaacacacaacttaatcgaatccaagtctcagacttta  14605800                                                            <---------ANAC58          --------->ANAC46                                                            <---------ANAC46          --------->ANAC58                                                            <---------ANAC58     --------->HSFB2a(2)                                                            ----------->GT1      <---------HSFB2a(2)                                                       <---------ANAC46        <-----------------AGL1                                                       <---------ANAC58<-----------GT1--------->ANAC58    <------ZmHOX2a(1)                                  --------->O2 --------->YAB1   --------->RAP2.6(3)  *TSS                                                 <---------ANAC55(2)<---------DAG2 ---DOF2      ---------->DOF2                          --------->ANAC55(2)<----------DOF2 ------>MYB46(3)    ---------->DOF2                    <---------ANAC58<---------AHL20(2) -----------   acaacaggaacaccgagaaagagaaagcctttgaaactctcccttatatcaaaaactacgtgtcgtttaatattaacttttttctaaaacggcacaatgt  14605900                                                ------>MYB46(1)                                                ------>MYB83                     ------------>CBF           -------->P               <---------ANAC46               --------->AtMYB61              <---------LBD16            <---------MYB52(2)                                  <------- ->CBF     ---------->DOF2<---------ARR11(3) --------->MYB46(3)      --------->ANAC55(2)    <--------   gcaaatgtattcatatagcggataacaatatccaagtttccaaacaaaccaactctgaaactgtttcactcacataataagagaacgaagagctaattgc  14606000                                                        ------>NtERF2                                                       ----------->HVH21                                                       --------->DEAR3(1)                                                      --------->ATERF1(1)                                                      --------->DEAR3(2)            <------ZmHOX2a(2)                                                      <------NtERF2                --------->ARR14(2)                                                     <---------ATERF1(1)           <---------ARR11(3)                                                     ------>NtERF2                 --------->ARR11(3)                                                    --------->ARR14(2)             <---------ARR14(2)                                                    <---------ARR14(2)          ------>ZmHOX2a(2)                                                   --------->ZAT2             <---------ARR14(2)                                                  <---------ATERF1(1)         --------->ARR14(2)                                               ------>NtERF2               <---------ATHB12                                <-------TEIL   <---------ATERF1(1)     ================HOX2a_HOX2a                              --------->ARR14(2) --------->DEAR3(1)    ------>ZmHOX2a(1)       *TSS                   <---------ARR14(2)<------NtERF2          ====================HOX2a_HOX2a      --------->TOE1(2)       <---------GLK1(2)--------->MYB52(1)      ===============HOX2a_HOX2a   <   <---------ARR14(2)     <------ZmHOX2a(2)  --------->MYB46(3)        =====================HOX2a_HOX2a   --------->ARR14(2)    <---------ARR11(3)  <---------MYB55(2)       --------->TOE2(3)            --   --------->GLK1(2)  --------->HSFB2a(2)  --------->ANAC58        ------->TEIL<------ZmHOX2a(2) <--- --WOX13(1)           --------->LBD16      --------->ANAC58        <---------ARR14(2)       <-------- ----CBF            <------NtERF2<-----------GT1--------->ATERF1(1)--------->ARR14(2)------>ZmHOX2a(2)   tgaagaatccgacgaaaatggctccgagatcagattcacaaaccctagccaccggctccgacgaaaatgaatcctcaatcgatccgatcttccacattct  14606100                               --------->ANAC58                               --------->bZIP60(2)                               --------->TGA1a                               <---------O2                               --------->O2                               --------->ANAC58                               --------->ANAC46                             <---------ALFIN1                          --------->AtMYB61                         --------->MYB46(3)         <----------DOF2 <---------MYB55(2)      <<<<<<<<<NAM     ------>NtERF2 <---------ARR11(1)   ----------->HVH21 <-----------ARR10    <---------ETT(1)       --------->ZAT2 ---------CCA1(2)     --------->DEAR3(1)     <---------At4g35610                                  --- ------->LBD16      ------>ZmHOX2a(1)       --------->ANAC58                       <---------At4g35610 ------LBD16    ------>ZmHOX2a(1)           --------->ANAC58                       --------->At4g35610 -GLK1(2)================================bZIP_DOF                         <---------ATHB12 <---------GLK1(2)   ccgtatcatccctttctccttcctccgaccaccacgtcttcgtctcaagctcccttccttcactctcccatctccaatgactgtcttctcactgattctc  14606200                                   --------->ANAC55(2)                         <---------ATHB12                                   --------->TGA1a                             <---------MYB55(2)                                   <---------ANAC55(2)                         --------->MYB46(3)                                   <---------bZIP60(1)                       --------->WOX13(1)                                   --------->bZIP60(1)                    <------ZmHOX2a(2)                          <---------ANAC46                               <---------ARR11(3)                          <---------ANAC58                               <---------ARR14(2)                          <---------ANAC58                      ------>ZmHOX2a(2)     <-----------HVH21                       --------->ARR14(2)                       ===============HOX2a_HOX2a                       <---------ARR14(2)                      ================HOX2a_HOX2a                     --------->LBD16    <---------WOX13(1)     <------ZmHOX2a(2)    --------->LBD16                   <---------LBD16 <---------O2               --------->ARR14(2)  <---------LBD16                --------->ATERF1(1)--------->O2               <---------ARR14(2) --------->MYB52(1)            <-----------HVH21      <---------ANAC46      --------->MYB52(1)------>ZmHOX2a(2)          ------>ZmHOX2a(1)     --------->ANAC46     --------->LBD16     --------->ARR14(2) --->ZmHOX2a(1)<---------ATERF1(1) <---------TGA1a  <-----------RAV1(2) <------ZmHOX2a(1)          <-   ctcacttacttcctcgtcgtctccggtttcgtctacgacgtgattgtcgagcctccaggtatcggatcgacacaggatccaatcaccgggtcagtaagac  14606300  Previous    Next  AGI:  At4g29860.1    Description:  EMB2757/TAN (EMBRYO DEFECTIVE 2757); nucleotide binding. similar to nucleotide binding [Arabidopsis thaliana] (TAIR:AT1G11160.1); similar to nucleotide binding [Arabidopsis thaliana] (TAIR:AT5G50230.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61040.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 14601704    to: 14605802    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g29870.1    Description:  similar to membrane protein, putative [Arabidopsis thaliana] (TAIR:AT2G19340.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO43189.1); contains domain PTHR13160 (PTHR13160); contains domain PTHR13160:SF2 (PTHR13160:SF2) Range:  from: 14606007    to: 14606680    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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