Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 --------->LBD16                                           <---------TCP20                                           <---------ARR14(2)                                           --------->ARR14(2)                                         <------MYB46(1)                                         <---------MYB46(3)                                         <------MYB83                                  --------->YAB1                     ----------->RAV1(1) <---------DEAR3(2)                            <---------ICU4                     <---------ALFIN1   <---------DEAR3(1)                         --------->AHL20(1)  <---------ZAT6  <---------PCF5       <---------ORA47(1)                          --------->AHL20(2)  ----------->GT1 --------->PCF2     <------MYB46(1)                    ------>ZmHOX2a(2) ------->DAG2    <-----------TCP11(1)<------MYB83                     <---------ARR11(3)            - ------->DOF2   --------->DEAR3(1)  --------->MYB59           <---------TOE2(3)    <---------AHL20(2) -REM1(1)      --------->DEAR3(2)   <---------AtMYB61        <-----------GT1       <---------AHL20(1) >ALFIN1      ------->TEIL     <------NtERF2  <---------HSFB2a(2)     --------->ARR11(3)  <----------   aaaagtgttatttatgaaccggcccacagagtcggagtttggtcggttccacaaatttcaaatttacgttgtgatctacatacaataaattatcacatct  14565900                                                                                    <-------GAMYB                                   <---------AHL20(1)                               ----------->GT1                  --------->TOE1(3)--------->ARR11(3)                              --------->ALFIN1  ----------->GT1 --------->TOE2(3)--------->AHL20(1) --------->AHL20(2)           ----------->GT1 --------->DOF2 -------->P   <---------HSFB2a(2)   --------->YAB1            <-----------RAV1(2) -GT1       ------->TEIL --------->ZAT14           --------->AHL20(2)      <-----------HVH21     <---   tataaagtcaaatgaaactacctcaactatactagaaaatattgaatactaaattataaaatacagaattagaaacttatcaggggtgttaaaatcaatt  14566000                  <---------YAB1                --------->ATHB51               <---------YAB1            --------->AHL20(2)            <---------YAB1                      <---------RVE1(1)         <----------DOF2                        <---------CCA1(1)     <---------ZAT18                           <---------ARR11(3)     --------->ZAT14                           --------->ARR11(3)----------->GT1     <---------ZAT14                  ----------->RAV1(1)      <---------ZAT14 --------GT1<---------AHL20(2)     <-----------GT1             --------->ZAT14 --------->AtLEC2   tacccagtagactttttattattgttgaactacgtttaaacaacatatagatatttcgaagtcaatgcagtcaaatatttcatacaaaacactttcgacg  14566100                                                                                                 ----                                                                                            ---------                                                                                          -----------                                                                                         <-------MYC3                                                                       ---------->DOF2   ------->MYC3                                                                       ===========================bZIP_DOF                                                                    --------->ANAC46    --------->ANAC55(2)                                                                    <---------ANAC55(2) <---------ANAC55(2)                                                                    --------->ANAC58    <---------TGA1a                                                                    --------->ANAC58    --------->ANAC46                         <---------ANAC58                        --------->ARR14(2)     --------->TGA1a                  ---------->ID1                                 <---------ARR14(2)     <---------O2                 <-----------GT1                             --------->YAB1<---------ARR11(3)    <---            <----------DOF2                                 <---------ATHB12            --------->O2         ------->TEIL <----------DOF2   ----------->GT1   --------->WOX13(1)--------->CCA1(2)    <---        <---------CCA1(2)<---------ANAC58              --------->TOE2(3)   --------->ARR11(3)    ----   aacacaacttgtatctttttttctctttggtgtcaacaagacttgtatatatatcaacatcaatgaaaatacgcaaagatatatatgttcacgtgacaat  14566200           ----------->GT1       <---------AHL20(1)       --------->AHL20(1)       --------->AHL20(2)      --------->AHL20(2)    --------->TOE2(3) <-----------GT1 ----->AHL20(1)                                                                                   --- --->CBF <------------CBF                                          --------->YAB1                 --- >HVH21<---------AHL20(2)                                   <---------CCA1(2)         --------->ANAC58 ------AHL20(2)                                        --------->ANAC46               --------->ANAC46 ------AHL20(1)                       <---------AHL20(2)--------->TOE2(3)             --------->ANAC58 ----->AHL20(2)                     ----------->TBP  <-----------GT1   *TSS   --------->YAB1   ------   ttattacattaaattgtatatagtctctctatggttctatataatctcatactttctacctcatctctatagtaatcccataatcaacaagacactctaa  14566300                                            <---------MYB46(3)                                            --------->MYB52(2)                                          <---------MYB52(1)                                     ------>MYB83                                     ------>MYB46(1)                                     -------->P            ------->GAMYB            --------->MYB52(1)    <---------ARR11(3)              --------->MYB55(1)    --------->ARR11(3)             <---------MYB59  <---------ICU4                              <---- -------->GT1    <---------MYB52(1)<---------MYB111(1)                                          <---- ------>YAB1--------->TOE2(2)      <---------MYB46(2) <---------YAB1                       <--------- --->YAB1  --------->MYB46(3)   <-----------GT1   <---------GLK1(2)            --------->bZIP60(2)   tagtaatatctcaacctccgtctcgttttcccattaacctacccgtttgttagattatgactaatactctctgtttaagcctcatcaccctaataacgct  14566400                  --------->TOE1(3)                                      --------->SPL7<------ZmHOX2a(2)                  --------->TOE2(3)                                     --------->MYB52(1)                ------>MYB83                                    --------->ANAC58   --------->MYB46(3)                -------->P                                      --------->ANAC46------>ZmHOX2a(1)                ------>MYB46(1)                                 --------->ANAC58==============HOX2a_HOX2a               <---------ALFIN1             <---------TOE2(3)  --------->WOX13(1)--------->MYB52(1) ------DOF2   <---------ALFIN1        --------->ZAT18      <---------CCA1(2)   <---------MYB59 -----DAG2  ------->GAMYB      <---------At4g35610 <---------ANAC58    <---------SPL7 --------->ARR14(2) --GT1   <-----------GT1       --------->At4g35610 <---------ANAC58   <---------DAG2  <---------ARR14(2)   ttttataagtttaaccccaaccttaatcaaatcagatgagggcattgatgttttcttacccatatcactcaaccttacggtcctaaccgatcccttctcc  14566500                                                       --------->At4g35610                                                       <---------At4g35610                                                       ------>ZmHOX2a(1)                                                   <-----------HVH21                                                   <---------RAP2.6(3)                                                   <---------SPL7                                                   ------>NtERF2                                                   --------->ORA47(1)                                                  --------->RAP2.3(3)                                                  --------->RRTF1(3)                                                  --------->DEAR3(1)                                                 --------->ATERF1(1)                                                --------->ABI4(2)                                                ------>NtERF2                                                <---------ATERF1(1)                                                <---------RAP2.3(1)                                               --------->RAP2.3(2)                                               <---------DEAR3(1)                                              --------->ATERF1(1)                                              <------NtERF2                                              --------->RAP2.6(1)                                              --------->RRTF1(1)                                              --------->RAP2.3(1)                 <---------ANAC46                                              --------->ERF1                      <---------ANAC58                                              --------->DEAR4(2)                  <---------ANAC58                                             --------->LBD16                     <------NtERF2                                             ------>NtERF2                      <---------MYB46(3)                                            --------->ANAC46                   --------->ALFIN1                                           <---------LBD16                    --------->ATERF1(1)                                       --------->GLK1(1)                     <---------ZAT2                                       <---------GLK1(1)                     --------->ZAT2                                --------->TOE2(2)<------NtERF2              --------->ALFIN1                                ------->GAMYB<---------ATERF1(1)            <---------AtMYB61                                --------->TOE1(2)--------->DEAR4(2)         <---------DEAR3(1)              --------->ANAC58  --------->DEAR3(1)--------->RAP2.3(2)    --------->ANAC46              --------->ANAC58 --------->DEAR3(2)--------->ORA47(2)     <---------LBD16      <---------At4g35610      --------->MYB46(3)--------->RAP2.3(1)  --------->MYB46(3)      ------>NtERF2          --------->MYB52(1)--------->DEAR3(1)   <---------ALFIN1   <---------At4g35610    --------->YAB1--------->ARR14(2)          --------->ANAC46                -   ------>NtERF2     --------->HSFB2a(2)<---------ARR14(2)        ------>ZmHOX2a(1)            <-----  <-----------RAV1(1)----------->GT1   --------->HSFB2a(1)------>NtERF2<---------ALFIN1    ------>ZmHOX2a(1)   atctctgccgcttctcacgacttcggtaacataaccgacgaaaatcccggcgccgtcctctgcccttcctccaccacggaggtggctcgtctcctccgtt  14566600                                         --------->LBD16          --------->ARR14(2)             ------>NtERF2          <---------ARR14(2)            <---------ALFIN1          <---------GLK1(2)         ------>MYB46(1)           --------->ZAT2         <------ZmHOX2a(1)          ------>MYB83              <---------ZAT2     ------->GAMYB                  --------->ZAT2            --------->At4g35610      --------->LBD16  --------->MYB52(1)              --------->AtMYB61           <---------At4g35610     <---------ANAC58  <---------DOF5.7(2)             ------->GAMYB             <---------RAP2.3(3)<---------ALFIN1   --- ----------->HVH21               --------->MYB46(3)  ---------->DOF2        <---------ZAT18   ------- -------->DOF5.7(2)             -------->P       <----------DOF2     ------>NtERF2    <---------ANAC58 ----MYB52(1)          ---------->DOF2 <---------LBD16   --------->ALFIN1   --------->ZAT18   -------   tcgctaacggaggattctcttacaataaaggctcaaccagccccgcgtctactttcaaagtggctgctcgaggccaaggccactccctccgtggccaagc  14566700                                                            --------->MYB55(2)                                                            <---------DEAR3(2)                                              <---------At4g35610                                   <                                              <------NtERF2<---------ANAC46                  <-------                                              --------->At4g35610                            <-------                                             <<<<<<<<<AtERF-4 <--------P <------NtERF2       <-------                                             <<<<<<<<<AtERF-3 <---------MYB55(1)             <-------                             <---------ANAC55(1)         ============================================                             <---------ANAC58<<<<<<<<<AtERF-2========================================                             --------->ANAC55(2)         ------------>AtMYB77                --------                             <---------ANAC46<<<<<<<<<AtERF-5===========================MYC_MYB     -                             =========================================MYC_MYB                <-------                             <---------ANAC55(2)         <---------RAP2.3(1)                 --------                             ========================================MYC_MYB               <---------TGA2(2)                             ==========================================MYC_MYB             ------>NtERF2               <---------ANAC46 <-----------HVH21        ===============================MYC_MYB  <---               <---------bZIP60(1)           <<<<<<<<<AtERF-1<-------GAMYB                -----------         <---------AtMYB61   ========================================MYC_MYB              --------->WRKY12       --------->LBD16       --------->O2    <---------RAP2.3(1)=====================================      --------->ANAC46       <---------O2    <---------ERF1<---------DEAR3(1)           --------->At4g35610     <---------LBD16         <---------TGA1a<---------ANAC46<---------MYB46(3)          <---------At4g35610   ------->TEIL--------->bZIP60(1)  --------->ANAC58    <---------DEAR3(1)    =======================  <---------ALFIN1           <---------bZIP60(2)       <---------At4g35610    <---------TGA1a<------- --------->ZAT14             --------->TGA1a<---------RAP2.3(2) <-------GAMYB <---------O2----------- --------->At4g35610      ----------->HVH21 <---------RAP2.6(2) ========================MYC_MYB  ---- <---------ZAT18          ----------->TGA1  <---------RAP2.3(3)<---------MYB46(3)   <---------SPL7<-- <---------ZAT14  <---------ANAC46  --------->ANAC58   --------->At4g35610 ----------->HVH21 -------- <---------At4g35610    <---------ICU4     --------->RAP2.6(3)==========================MYC_MYB------ ------>At4g35610<------NtERF2 --------->ALFIN1       --------->MYB52(1) --------->At4g35610 <------- -->ANAC58    <------NtERF2<---------TGA2(2)<---------DEAR3(1)======================================= -->ANAC58  --------->ALFIN1 <---------ANAC58------>NtERF2<------NtERF2  <---------At4g35610 >>>>>>>>   ctctgcacccggaggtgtcgtcgtgaacatgacgtgtctcgccatggcggctaaaccagcggcggttgttatctcggcagacgggacttacgctgacgtg  14566800  Previous    Next  AGI:  At4g29740.1    Description:  CKX4 (CYTOKININ OXIDASE 4); cytokinin dehydrogenase. Identical to Cytokinin dehydrogenase 4 precursor (CKX4) [Arabidopsis Thaliana] (GB:Q9FUJ2;GB:Q9SU77); similar to CKX2 (CYTOKININ OXIDASE 2), cytokinin dehydrogenase [Arabidopsis thaliana] (TAIR:AT2G19500.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40288.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77185.1); contains InterPro domain FAD-binding, type 2; (InterPro:IPR016166); contains InterPro domain FAD linked oxidase, N-terminal; (InterPro:IPR006094); contains InterPro domain FAD-linked oxidase-like, C-terminal; (InterPro:IPR016164); contains InterPro doma Range:  from: 14566271    to: 14569338    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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