Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                             --------                                                                                             --------                                                                     <---------ARR14(2)      <-------                                                           <---------ARR11(1)           --------->bZIP60(1)                                                           ------->TEIL            --------->At4g35610                                                    <-------TEIL     --------->ARR14(2) <---------bZIP60(1)                             --------->YAB1     <---------TOE2(2)   <------ZmHOX2a(1)----------->HVH21 --------->ICU4             <---------YAB1   --------->YAB1--------->GLK1(2) <-----------GT1 -------- <---------YAB1         <---------DAG2       --------->ATHB12    --------->YAB1    <---------At4g35610 ------->YAB1           <----------DOF2<---------ARR11(3) <---------ARR14(1) --------->ZAT6  -------- --------ICU4     <---------ATHB12   <---------YAB1<--------P --------->WOX13(1)  --------->GLK1(2) -   gtcatgactatcacacactaatcaagctttatgaaaatcaagataaatcataggtagatcgaatctatcaggaactgtttcactaatctgacatcaagta  14564000                                                         <---------ANAC58                                                         <---------ANAC58                                             --------->AGP1                                            --------->At4g35610                                         <------ZmHOX2a(2)                                       <---------GLK1(1)--------->At4g35610                                  ------>ZmHOX2a(2)<--------HAHB4                             -------                                 --------->CCA1(2) <---------ICU4                           ------>MYB83                                 <------ZmHOX2a(2) -------->ATHB1                         --------->AtMYB61                                <---------ARR14(3) --------->YAB1                   --------->bZIP60(1) ---------AHL20(2)              --------->ARR11(3) --------->ATHB51                 <---------bZIP60(2) ->ANAC58                       --------->ARR14(3) --------->ATHB12                 <---------bZIP60(1) ->ANAC55(2)                    <---------ARR14(2)<---------ATHB12                 <----------------- --ANAC55(2)                    --------->ARR14(2)<---------ATHB51               ----------->TGA1 --->GT1                        <---------ARR11(3)--------->ICU4                 --------->ICU4 ->ANAC58                       --------->AGP1  --------->WOX13(1)           --------->At5g28300 -------->AHL20(2)              <---------AGP1<------ZmHOX2a(2)          --------->MYB52(1) ------>MYB46(1)   atataaattgagaacaagaaggggcaatttcgaagatctagagatcagatcaattattagcttacatgaagaagatagcggtaatgacgagaccaatcgc  14564100                                                                       <---------LBD16                                    <---------ARR14(2)                <---------LBD16                                    --------->ARR14(2)             <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                  --------->LBD16                  ----------->HVH21                                <------NtERF2                  <---------DAG2                                <---------LBD16             --------->RAP2.3(2)                               ------>NtERF2                --------->RAP2.3(3)                 -----                               --------->MYB52(1)          --------->ERF1                     ------>MYB83                              <---------ALFIN1             --------->DEAR4(2)                 ------>MYB46(1)                              --------->DEAR3(1)           --------->ORA47(2)               ---------                             --------->ERF1                --------->RAP2.3(1)              <--------                             <---------ABI4(2)             --------->ATERF1(1)              ---------                             --------->ATERF1(1)          <---------RAP2.3(1)               <--------              --------->DAG2<---------ATERF1(1)       --------->ARR14(2)                   --------->ANAC46   <---------ZAT14         --------->ANAC46  --------->ANAC46 <------NtERF2                --------->ANAC58   --------->ZAT14     <-------TEIL <---------GLK1(2) <---------ARR14(2)--------->LBD16    --------->ANAC58   <---------ZAT18    --------->CCA1(2)      --------->ANAC58<---------ATERF1(1)         --------->ANAC46   --------->ZAT18   <---------ARR14(2)      --------->ANAC58------>NtERF2               --------->ANAC58 -->YAB1     ---------->DOF2------>NtERF2 <---------ARR14(2)--------->DEAR3(1)           --------->ANAC58 ------TaNAC69(2)    --------->ARR14(2)   --------->ARR14(2)--------->RAP2.6(2)        <---------ALFIN1   aagagtgaacaccgataaagtcggatacagcgccaccggaatcggactcgcaatcggtttcgccgccttctcaccgggaacgagcacaaacacaccaaac  14564200                                                                            <---------YAB1                                                                           <---------At5g28300                    --------->MYB46(3)                             ------>ZmHOX2a(2)                  ----------->RAV1(1)                             <------ZmHOX2a(2)         ----------->GT1                                         ------->TEIL      --------->GLK1(1)                                          --------->ARR11(3)  --------->YAB1 <----------ID1                     --------->ANAC58       >>>>>>>>>>>>>>>>>LFY ---->YAB1     --------->ANAC58             ----------->HVH21    --------->ARR14(2)              <<<< >MYB46(3)     --------->ANAC58         <---------At4g35610      <---------ARR14(2)       <---------ARR11(3) -MYB46(2)     --------->ANAC46         --------->At4g35610      <---------AGP1         ----------->ARR10 >AtMYB61--------->YAB1         <------ZmHOX2a(2)   --------->ANAC58      <-----------GT1 --------->ARR11(3) -MYB111(1)  ---------->DOF2   <---------ARR11(3) ---------->DOF2--------->AGP1 <-----------RAV1(1) <   aaaatcagaaatcgtaaaagcaacaaatagagagatcaaattagctgtgactgaaagcacttggacggatctagatttaccattgttgctaagctcttct  14564300                                                                                                  ---                           --------->DAG2                                                         <--                          ---------->DOF2           <----------DOF2                             <----                       --------->YAB1      ------>ZmHOX2a(2)                              -----------   <<<<<<<<<TBF1<------ZmHOX2a(1)        --------->ARR11(3)     --------->ANAC46       --------->LBD16 <<<<<TBF1 ------>ZmHOX2a(2)          <---------WOX13(1) ------>ZmHOX2a(2)           <---------LBD16< <<<<<<<<TBF1   ==================================HOX2a_HOX2a--------->ZAT14        *TSS<---------MYB52(1)   tcttcttcttcgatctgaggaacaatgaaaaagctatttgactgatctcgctcgcttgatcgcttcactaaacaaacacgagtcgcttccggtttgtact  14564400      ----------->GT1    <---------MYB52(1)    <---------ANAC58    --------->At5g28300    <---------ANAC46    <-------GAMYB    <---------ANAC58   ----------->GT1 ------->GAMYB      ------->GAMYB ------>MYB52(1)    ------------>AtMYB77 ---------GT1       <---------ALFIN1                            <---------AHL20(2) -----MYB59   --------->ZAT6                              <-------TEIL ---->AtSPL8<-----------GT1   <---------AHL20(2)      <---------TOE2(3)                      <------- ---------LBD16    --------->MYB46(3)       <-----------GT1    --------->AHL20(2) --------->ICU4   taaccggcttgttataacacaaccacggttattttatgggccagtttttctgtttaaaggttcgatttaataggcccaaatatacttattaaggcctttg  14564500                               <---------TOE1(3)                               <---------TOE2(3)                          <----------DOF2                 <----------DOF2                       <---------ZAT14 ----------------->AG              <---------ARR11(1)                       --------->ZAT14 ----------------->AGL1              <---------ARR11(3)           <---------DAG2          ------>ZmHOX2a(1)     <<<<<<<<<<GATA-1              --------->ARR11(3)           <----------DOF2         <----------DOF2      <---------GLK1(1) --------->AHL20(2) <---------ARR11(3)  <-----------GT1--------->ZAT18<-----------------AGL1 ---DOF2     <---------CCA1(2)<-----------GT1     ---------->DOF2------>ZmHOX2a(2)      --------->GLK1(1)   atataaaatgtgttcatatctttatcttcttttaacgttgtataactttattcaaagtgcaatgtgatcctttaccattttcgaaaattgaaatccactt  14564600                                                 <---------ZAT18                                                <---------ANAC58                                               --------->MYB59                         --------->TCP15(1)                                               <---------MYB46(3)                      <---------PCF2                                               --------------->AtSPL8                  --------->TCP20                                               <---------------AtSPL8                 ----------->HVH21                                            <---------ARR14(2)                    --------->CCA1(2)                                   --------->LBD16                               <---------ARR14(2)                                  --------->HSFB2a(2)                     --------->At4g35610                          <---------ATHB12  --------->ARR14(2)            --------->ZAT2        --------->At4g35610      <---------LBD16<---------ANAC58          <---------ZAT2   <---------ETT(2)     --------->WOX13(1) --------->ATHB12               ----------->RAV1(2)   --------->ETT(2)  <-----------HVH21    <---------YAB1                <---------ALFIN1            -   caatgtagacatctccaactccttgtcaatcaatttccggattgaagattgggtactctctctagatttagttcccacctgaaaatatgggaccggatgt  14564700                      <---------WRKY38(1)                                                  <---------WRKY18(1)                      <---------WRKY45                                                    --------->WRKY12        <---------ARR11(3)                              ---------->DOF2                   --------->WRKY45        --------->ARR11(3)                           --------->AtLEC2             <---------AHL20(2)        <---------GLK1(2) --------->YAB1    <---------MYB52(1)                ----------->GT1      --     <------------MYB.PH3(1)   <---------ANAC46    <---------AtLEC2          <---------TOE2(3)     --   --------->MYB52(1) <---------WRKY12    <---------ANAC58              <---------MYB46(3)--------->WRKY38(1) -------->YAB1       --------->WRKY18(1)  <---------ANAC58  <------ZmHOX2a(1)<---------TOE1(3)     --   aatagtaacagatttttgtattggtcaacaatgacttatagatttcgtttttttcatggaaaggacttagaaattggttagggtttaatttgttgaccaa  14564800                                                   ------>NtERF2                                                   --------->At4g35610                                                   <---------At4g35610              ---------->DOF2                   --------->At4g35610              XXXXXXXXXXXXXXXXXXXX>MIR399B/C    --------->ZAT2         <------MYB46(1)    <---------ARR14(2)                          <---------At4g35610    <------MYB83 ------->ANAC46                     ----------->TGA1                  --------->MYB59 --------->TOE2(3) ------->ANAC58      <-----------RAV1(1)    --------->MYB52(1)       <--------P      --------->REM1(1) ------->ANAC58      --------->ALFIN1 <-----------------------TaNAC69(2)<------ZmHOX2a(1)          --   tacgaaaatatggtcccaaagaagtgttgccatactaaatgacgaaaaccggctgccgaatatttctataggtaggacatagaacttacatcaatttgcg  14564900  Previous    Next  AGI:  At4g29735.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK94590.1); contains InterPro domain Protein of unknown function UPF0197 (InterPro:IPR007915) Range:  from: 14562645    to: 14564384    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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