Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             ---------->DOF2                                                                      <----     ---------->DOF2                                                                            -----  <---------------AGL15                                                                         -----  --------------->AGL15                                                                 --------->LBD16 ----------------->AGL2                        --------->AHL20(2)                      --------->HSFB2a(2) ----------------->AGL1                        <---------AHL20(2)                      <---------HSFB2a(2) ------>DOF2                            --------->At4g35610             ------>ZmHOX2a(1)       <---- ->At4g35610            ---------->DOF2 <---------At4g35610    <<<<<<<ZML2             <---------HSFC1(1)   aaagcctaaaagagaaagaaacacagaaaagcatggagactgagctaaattaaaaacccgaactagaacatgtcctaatctcacaaattccagaaaccag  14562100                                             ----------->GT1                                 <-------                                       --------->ANAC58                  ---------->DOF2     --------                                       --------->ANAC58           ---------->DOF2           --------- -----ZAT2                        ----------->HVH21       ----------->RAV1(2)               --------- ---->At4g35610                 --------->ZAT2  ------->TEIL <---------WRKY18(1)            --------- ---->ZAT2                      --------->At4g35610     ------->GAMYB<----------ID1   <---------YAB1 -----At4g35610            <-----------GT1 --------->GLK1(1)----------->HVH21    <---------GLK1(2)---   ctaagaaaaactctcaatctatgagtatttcactagctgaaacggaaatgtaactcaatcgcctgaccaaaagcacaaagctagaatttttatttcccaa  14562200         <----------DOF2       ------>MYB46(1)       ------>MYB83    --------->MYB46(3) --------AGL15 ------->AGL15 -------->AGL2             <------ZmHOX2a(2) -------->AGL1            <---------ARR11(3)                         --------->ARR14(2)      <------- -------->AGL3            --------->ARR11(3)           --------->YAB1<---------ARR14(2)      <------- ------->DOF2         ---------->DOF2                XXXXXXXXXXXXXXXXXXXXX>MIR2936       <-----------RAV1(2)   aaaagaaccaactttctccaaaaccaaagatcgaaaaccctagaaacagaaaacctataaaaaaaaacacagacctgcaagagagagagggccagacgag  14562300                                                                         <----------DOF2                                                                        <---------DAG2                                                                      <------NtERF2                                                                     ------>NtERF2                                                                     --------->ABI4(2)                                                                  ------->GAMYB                                                               --------->MYB52(1)                                                               <---------DOF5.7(2)                                                              <---------WRKY45          --------->MYB52(1)                                  <---------WRKY38(1)                ----    <---------WOX13(1)                                        <---------WRKY12                   ----  --------->ATHB12                                           --------->DOF5.7(2)          <---------- <---------YAB1  --------->YAB1                             <-----------HVH21             ----------- --------->ICU4 <---------ATHB12                           <---------bZIP60(1)       <---------REM1(1) --O2   --------->MYB46(3)                                 --------->bZIP60(1)     <---------At4g35610 --TGA1a<---------MYB52(2)                                 <---------ANAC46        --------->At4g35610   ggtatgattaacaaacgaatcatagagaatgggaagaagagtcttccactgagagtaagtgtcgtcaacggtggccttttgactctgctgtagcaaaaat  14562400                              <---------ANAC58                         <---------TOE1(2)      <------                              <---------ANAC58                        ------>ZmHOX2a(1)       <------                          <---------GLK1(1)                    --------->LBD16                <------                       <---------TOE2(3)                     <---------LBD16                 <------NtERF2                       <---------TOE2(2)                  ----------->HVH21              <---------ZAT2 ----->YAB1            <---------TOE1(2)                 <-----------HVH21               --------->ZAT2 ------->GT1       <----------DOF2                <---------ICU4     <---------TOE1(1)  --------->ALFIN1 -----AGL15  <-----------RAV1(1)             --------->LBD16 <---------At4g35610     ------>NtERF2 ---->AGL15  <---------MYB46(3)             --------->ANAC46 --------->At4g35610  --------->HSFB2a(2)   ggtaactgagactcgttgttgctcttaggtttccgtcttctcttatccgtcaaaatggctgtcaccggagtcctaggtgctcttctcggcctggtggctt  14562500                                                                                             ------->MYC2                                                                                             <-------PIF5                                                                                             ------->MYC4                                                                                             <-------MYC2                                                                                             ------->MYC3                                                                                             ------->PIF5                                                                                             <-------MYC3                                                                                             <-------MYC4                                                                                            ---------                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                 --------->AHL20(2)                                                                                <---------YAB1      <                                                                             <---------YAB1 <--------                                                                            <---------AHL20(1)-------        <---------ZAT2                                                   --------->YAB1     <--------        --------->At4g35610                                             <---------YAB1      <<<<<<<<<        <---------At4g35610                                           --------->YAB1   --------->ANAC46        --------->ZAT2                        <-----------GT1  ---------->ID1<---------AHL20(2)  ---- ---ANAC46        <----------DOF2           *TSS           ========================================== ---ANAC58      <------------------------ANAC81            <----------DOF2<---------AHL20(2)<-------- ---ANAC58 <---------At4g35610  <----------DOF2     --------->ZAT14 <-----------TBP<---------YAB1<---   gaacagtcgctgctgcttcgctttccatttccttcttttctctcgttttctctctactctcctttgttttttttataatattattatttatgccacgtgg  14562600                    --------->ANAC58 >PIF3(3)           --------->ANAC46 >TGA1a             --------->ANAC58 -ANAC46         --------->ARR14(2) >O2        ------>NtERF2                                                             <---------ARR11(3) ---------ZAT14  <---------ARR14(2)                     --------->ATHB12              <-----------ARR10 -O2       <---------ETT(1)                        <---------AHL20(2)                 --------->ARR11(3) -->ALFIN1 --------->LBD16                         --------->AHL20(2)                 --------->ARR14(2) -TGA1a<---------SPL7------------>CBF --------->AHL20(2)<---------ICU4            <---------ICU4 <HY5  <-----------HVH21            --------------->AGL15                      --------->YAB1 ------->GT1--------->LBD16         <---------------AGL15                    <---------KAN4(2) =bZIP_DOF <---------LBD16         <---------ANAC55(2) --------->ICU4     ----------->GT1 -PIF3(3) <---------LBD16       <---------ARR14(2)--------->YAB1  --------->ZAT6  --------->YAB1 ------ANAC46<------NtERF2      --------->ARR14(2)--------->AHL20(2)  ---------->DOF2 <---------ARR14(2)   agtaaacttcgtcccggcaaatacccaataggcaaatacttaaattagcgaattaaaatgatttcttcacactaaagagtataatcagtatcttcccatt  14562700                                                                                    --------->At5g28300                                                                                    <------NtERF2                                                                                   ----------->GT1                                        <-----------GT1                           <---------DEAR3(1)                         <---------ARR11(3)                    ------->GAMYB ---------->DOF2                        <---------CCA1(2)                     --------->ANAC58    <---------DREB2C(2)               <----------DOF2       ----------->GT1          --------->ANAC46 --------->DAG2          ---------->DOF2--------->ARR11(3) --------->MYB52(1)--------->ANAC58---------->DOF2     ---   acaaaatttgagtaaagctttcttctaaatcttggtagaaagttactaactgatcaacttaacaacgcaaacgctgttctaaaggcggtgaaaattgaaa  14562800                                       --------->YAB1                                   <---------AHL20(2)                                   --------->AHL20(2)                                  --------->AHL20(2)                                  <---------AHL20(1)                           ----------->GT1                                                       <---             <---------ANAC58<---------ARR11(3)                                          <---------YAB1             <---------ANAC58--------->ARR11(3)               --------->REM1(1)  --------->YAB1  <--- ------>AtMYB61    ---------->DOF2<---------AHL20(2)  ---------->DOF2           <-------TEIL   <-----   ccaaaactcggtttagcgttcaaaagaagaagataatttaattgtaacttggtgtttaaaggctacttctcaagtcttaacattcataactctgatttta  14562900                                                                                         ----------->GT1                                                                                   <---------STY1(2)                                                                <------ZmHOX2a(2)  --------->STY1(2)       --------->YAB1                                         <------ZmHOX2a(1)   --------->ANAC58 ------ANAC58                                          ================HOX2a_HOX2a--------->ANAC58 ------ANAC58                                          <------ZmHOX2a(1)      --------->AtMYB61     - ------GT1       <---------MYB52(1)                  <---------TOE2(3)     --------->ANAC46       ---   cttgaacaaagataaatctgttttttttgtctttgaactagttgggaatagtattgaggaagaaggatcagacataaacaccactagcaagtagcaaaaa  14563000  Previous    Next  AGI:  At4g29730.1    Description:  NFC5 (NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP C 5). Identical to WD-40 repeat-containing protein MSI5 (MSI5) [Arabidopsis Thaliana] (GB:Q9SU78;GB:Q6NQ53); similar to FVE [Arabidopsis thaliana] (TAIR:AT2G19520.1); similar to WD40-like [Medicago truncatula] (GB:ABN08755.1); similar to FVE [Pisum sativum] (GB:AAX47182.1); similar to nucleosome/chromatin assembly factor group C [Zea mays] (GB:NP_001105191.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 14558991    to: 14562544    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g29735.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK94590.1); contains InterPro domain Protein of unknown function UPF0197 (InterPro:IPR007915) Range:  from: 14562645    to: 14564384    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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