Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        ------->GAMYB                                   ------>MYB46(1)                                   ------>MYB83                                   --------->MYB52(1)                                  --------->MYB55(1)                                     --------->At5g28300                                 <---------MYB46(2)                                     ----------->GT1                                 <---------MYB111(2)                                   ------>ZmHOX2a(2)                                 <---------MYB52(2)         ------>ZmHOX2a(1)         <------ZmHOX2a(2)                    --------->ANAC46 <---------MYB55(2)     =================================HOX2a_HOX2a              <-----------HVH21  <---------MYB59            ==================================HOX2a_HOX2a           <---------ZAT14       --------->AtMYB61      <---------ARR14(2)           <---------ARR14(2)           <---------ZAT18       <---------MYB111(1) <---------TOE1(3)               --------->ARR14(2)           --------->ZAT14      --------->ANAC55(2)  --------->MYB59               --------->LBD16      --------->ZAT18           --------->ANAC46     <---------TOE2(3)           <---------LBD16      --------->ZAT14      --------->At4g35610 <---------TOE2(3)                 ----------------->AGL1      <---------ZAT14   --------->RAP2.6(3)    <---------TOE1(3)                --------->MYB52(1)   <---------MYB46(3)  --------->MYB52(1)--------------->AGL15                  -------->P <---------MYB52(1)--------->MYB46(3)--------->MYB46(3) --------->ARR14(2) <---------ALFIN1   gcccttggttcactgcggtcacccacaacggctcacctaaccaccatttagggtttaggttcctgttgaatagttccccacttaccggatcggtaaattt  14542100                        --------->ARR14(2)             --------->ALFIN1            --------->LBD16           <---------ANAC58           <---------bZIP60(2)    <---------MYB52(1)                  <------NtERF2           <---------ANAC46    <---------LBD16                       <---------MYB46(3)           <---------ANAC58    --------->ZAT18                      <---------ANAC46  <-----------GT1      <---------ICU4    <---------ARR14(2)                          --------->ALFIN1--------->AHL20(2)   <---------ICU4     --------->LBD16                       --------->ANAC58 <---------LBD16  <---------YAB1     --------->RAP2.6(2)                    --------->ANAC58--------->MYB52(1)  --------->ICU4    <---------LBD16<--------P               --------->bZIP60(2)--------->LBD16   gttcatgattatgccgtgggaagccggatagagtccggtagcgattgagtaatggtttgggaacgtcatggtggggaaaaccggaattaaaccggtctta  14542200                                 <---------ANAC58             <---------LBD16               ---------                                 <------MYB83               --------->ARR14(2)              <--------                                 <------MYB46(1)            ------>MYB46(1)                <---------ABI4(2)                                 <---------ANAC58           <---------ARR14(2)             <---------MYB55(2)                             --------->ATHB12<---------------AGL15                         --------->MYB46(3)                   --------->At4g35610       --------------->AGL15           --------->ANAC58              --------->CCA1(2) --------->MYB111(1)         --------->MYB52(1)      <-----------GT1 <              <---------GLK1(1) <---------AtMYB61         <---------MYB59    --------->ANAC58       -             --------->ARR14(2) <---------MYB46(3)        ------->GAMYB     <---------TOE2(2)     <--             <---------ARR14(2) --------->MYB46(2)      <-----------------AGL1<------ZmHOX2a(1)  <---         <---------LBD16<------ZmHOX2a(2)   <-----------------AGL3    --------->AtMYB61  <---------ARR14(2)     --------->SPL7<---------At4g35610      <-----------------AG--------->LBD16     --------->MYB52(1)   <---------MYB52(1)  --------->ARR14(2)   <---------ANAC46------>MYB83    <---------TOE1(2)--------  <---------DEAR3(2)   <---------ARR14(2)   <-----------------AGL1   --------->MYB46(3)  --------->ARR14(2)   gcttcggtacctctggatatgagcagatcgatgtttggtgtctctgtcttgaattggtaaccgaaccggaaaccatcgcaggaaattaacagaaccaccg  14542300                                  --------->TOE1(2)                                  <---------SPL7                                 <---------ANAC58                                 <---------O2                                 <---------bZIP60(2)                                 <---------ANAC46                              ----------->HVH21                              ------>ZmHOX2a(1)                            --------->At4g35610                            ----------->RAV1(2)                            <---------At4g35610                         --------->GLK1(1)                     <------MYB83<---------ANAC58                     <------MYB46(1)                    --------->ALFIN1                   --------->ALFIN1                   ========================MYC_MYB        <----------DOF2  <---------GLK1(1) --------->ALFIN1      <---------At4g35610--------->ATERF1(1) ==========================================MYC_MYB                                <------ZmHOX2a(1) <-------GAMYB     <--------P ----------->TGA1                        ------>NtERF2 >AtMYB61        <---------MYB46(3)   <------ZmHOX2a(1)              <---------RAP2.6(2) -ALFIN1===================================bZIP_DOF                  <---------ANAC46 ---------MYB46(3)=========================MYC_MYB                  --------->RAP2.6(3) -------->MYB52(2)<-------GAMYB  <---------TGA1a                   --------->MYB52(1)               < -------MYB52(1) --------->ALFIN1--------->TGA1a                  ----------->HVH21     --------->YAB1 ------MYB52(1)  --------->MYB55(2) <---------TOE2(2)    --------->ATHB12  <---------ANAC46    <----- ->MYB52(1)    <---------ANAC46<---------TGA2(2)        --------->MYB46(3)<---------LBD16  ----------   gtttgttgagcttcttggggggttggggtctcctgacgtaggaagatggggagtccgaaccattggcagtgacggctacggagaggacaatgagaacggt  14542400                                   --------->ARR14(2)                                            ----                                   --------->SPL7                                      <---------ANAC58                                   <---------ARR14(2)                                  <---------ANAC58                                 ----------->HVH21                                     *TSS <--------                              --------->MYB52(1)                                      <------MYB83                             <---------ARR14(2)                                       <------MYB46(1)                        --------->LBD16                  --------->ATHB12             <---------MYB46(3)                        ----------->GT1           <---------DAG2                  <---------MYB46(3)                      <---------LBD16             <----------DOF2                 --------->ATHB12 ---------ZAT6     ----------->HVH21           <-----------GT1                   <---------YAB1  ---- ------HVH21     --------->ANAC55(2)     <-----------RAV1(2)        ---------->DOF2 <---------WOX13(1) -->MYB.PH3(1)   <---------ANAC55(2)--------->DEAR3(2) <-----------TGA1    <---------YAB1   ---------   tagagataacttgtacaatatgtaaccggaaaaaccggaccggccaggtttacttttcgtcattgagagagaaagttttgatggtgattggttgagctct  14542500                                                                                            ---------                                                    --------->AHL20(2)                    <----------                                 <----------DOF2    <---------AHL20(2)                    <---------MYB52(2)     <-------TEIL             --------->ARR11(3)    <-----------TBP                       <---------MYB59    --------->DOF5.7(2)   ---------->DOF2         <-----------TBP                         <---------MYB46(2)   --------->TOE1(3)    <------NtERF2           <-----------TBP                <---------YAB1 ----->ANAC58          --------->RAP2.6(2)    <----------DOF2               <---------AHL20(2) -At4g35610           <----------ID1      ---------->ID1        --------->GLK1(2)       <-----------GT1 ----->ANAC58<----------DOF2  <---------ARR11(3)--------->AHL20(2)    <---------ANAC46<---------WOX13(1) >At4g35610  <---------------AGL15       <-----------GT1       <---------GLK1(2)   <---------YAB1   agcaacgttcacattctttatagagcggcaaagttcttttttttttctctttatatatataacaagaatctctcgtgttttatttttgattaactaacta  14542600                                ----------->GT1                                <------MYB83                                <---------ANAC58                                <------MYB46(1)                                <---------ANAC58                               <---------MYB46(3)                               --------->MYB55(2)                               <---------DEAR3(1)                               --------->MYB111(2)                              <---------ANAC46                              --------->ALFIN1                           --------->ICU4                               --------->ANAC58                      --------->ANAC58                             --------->ETT(1)                      <------MYB46(1)                  --------->WRKY38(1)                      --------->ANAC58              --------->ALFIN1 <------NtERF2                      <------MYB83         <---------DAG2     <---------ANAC58   --------->GLK1(2)  <<<<<<<<<TBF1     <-----------RAV1(2)    <----------DOF2    <---------ANAC58  <---------GLK1(2) >MYB52(1)<---------ZAT6   <---------AtMYB61        <---------ZAT6--------->RAP2.6(3)           <---- --MYB.PH3(2)       <---------ANAC46    <-----------GT1--------->WRKY12 --------->ANAC58  --------->TOE2(3)   attcttcttctagtgttaagtggcaggtaatggtgggtgatataactttttgaagtgttgactgtcttgtcggcaagtaatagattctctaatctcaaat  14542700                                        <---------ZAT6                                   --------->YAB1                                  <---------YAB1                                       --------->GLK1(1)              ----------->GT1   --------->YAB1          <---------AHL20(2)             <---------GLK1(1)          <---------SPL7       <---------YAB1          <---------AHL20(2)           <---------TOE2(3)  ---------->DOF2           --------->ICU4     --------->TOE2(2)               <---------MYB46(3) --------->YAB1    <---------AHL20(2) --------->YAB1   --------->AHL20(2)  --------->DAG2       <---- -----ATHB12<---------TOE1(2)--------->YAB1  <---------TOE2(3)            ---------->DOF2  <---------YAB1   caataaaagcatcgtatggttttaaatgctattatgataatagtattaacatatgaattaaatgactcatctactgaaaagttgttgagatttctgattt  14542800                              --------->ARR11(3)                            ------>ZmHOX2a(1)                       --------->ANAC58                                                   --------->bZIP60(1)                       --------->ANAC46      <---------AHL20(2)                      <---------ANAC58                       --------->ANAC58      <---------ICU4                          <---------ANAC55(2)                   <-----------HVH21         --------->AHL20(2)                      <---------ANAC58                  <----------DOF2        --------->AHL20(2)                          --------->ANAC55(2)                  ------>ZmHOX2a(1)      <---------AHL20(2)                       <---------ARR14(2)                  =====================HOX2a_HOX2a                      ------>ZmHOX2a(2) <---------bZIP60(1)              --------->ARR14(2)     <---------YAB1                 <---------YAB1--------->ARR14(2)              <---------ARR14(2) <----------DOF2                 --------->ARR14(2) <-------TEIL              --------->GLK1(2) ------>ZmHOX2a(2)                <---------ARR14(2)--------->GLK1(2) -------GT1  <---------GLK1(2)<---------ARR11(3)               <------NtERF2      <---------GLK1(2)<<   tccccatgtttttcagaatcctttcacgtcctgatctttatttttaattaatacatagggatggccgaatatgatcggactcgagattcgtgacttcatc  14542900                                                     --------->ATHB12                               -                                                    <---------AHL20(2)                             --                                                   <---------AHL20(2)                              <-                                                   --------->AHL20(2)                             <--                                              <---------ARR11(3)                                  ---                       ---------->DOF2        --------->AHL20(1)                                  <--                    --------->YAB1            <---------AHL20(1)                                  ---            ----------->GT1  --------->MYB52(1)<---------AHL20(2)            <---------ARR11(3)   --- <<<<<<<<<<<<<<<LFY--------->ICU4--------->At5g28300<---------YAB1           --------->GLK1(2)    <--   aacacaatggaaattggtgaaatgataaagaaaacggtgagtaatctatatattttaattggaatagatttctagccaaaatctaaaatttagtctccaa  14543000  Previous    Next  AGI:  At4g29690.1    Description:  type I phosphodiesterase/nucleotide pyrophosphatase family protein. similar to type I phosphodiesterase/nucleotide pyrophosphatase family protein [Arabidopsis thaliana] (TAIR:AT4G29700.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65367.1); contains InterPro domain Alkaline phosphatase; (InterPro:IPR001952); contains InterPro domain Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; (InterPro:IPR002591) Range:  from: 14540913    to: 14542487    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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