Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     <---------AHL20(2)                                              --------->YAB1                                        --------->ZAT6                                      <-----------GT1                    ------->GAMYB                                     ----------->HVH21                   --------->At1g77200                                  <---------ARR14(2)                     <---------ETT(1)          --------->YAB1          --------->ARR14(2)<---------ICU4      --------->DEAR3(2)   <-------   tttagtttgcaatcttcaaacacatattcaatatcagatttgacactatcaaaataatcgctatgctacaatctaccgacaattgaactagcattttaca  14522200                                                                                                   <-                                                                                           --------->ICU4                                                                                          <---------TOE2(3)                                                                                          <---------TOE1(3)                                                                                         <---------DOF5.7(2)                                                                                       --------->DOF5.7(2)                                                                                      --------->TOE1(3)                                                                      <----------DOF2 --------->TOE2(3)                                                                   <------ZmHOX2a(1) <---------ANAC55(2)                                                                 <---------TOE2(3)   <---------ANAC46                                              <-----------GT1 --------->DOF5.7(2)    <XXXXXXXXXXXXXXX                        <-----------GT1--------->AHL20(2)    --------->TOE2(3)  <---------ICU4     --                 <<<<<<<<<GATA-1       <---------AHL20(2)    --------->TOE1(3) --------->ICU4      <- <-----------GT1<-----------GT1 <-----------GT1         <---------AHL20(2)     ------>ZmHOX2a(1) <--- ----GT1    <---------ICU4<---------YAB1   ----------->GT1 <---------TOE2(3)   <---------YAB1  <-----   aataaacttcttaatttttatctatattactattaaaccattaaaatgttactactaaataaacgttaaggacttttagtcctcattacgttaatgttta  14522300                                                           <---------ANAC58     <-----------GT1                                <---------AHL20(2) ----------->TBP                                    <-----------GT1 ----------TBP                                   <---------ICU4 XXXXXMIR849                                  --------->TOE1(3) ------->AHL20(2)                             --------->TOE2(3)                                    <- --------AHL20(2)      <----------DOF2       --------->ZAT6<---------ANAC58                       <-- --------TBP<---------ICU4 <-----------GT1  -------->P <----------DOF2        ------->TEIL   <------- ----AHL20(2)          <---------DAG2    <---------MYB52(2)<---------ANAC46<---------YAB1 <---------At5g28300   tttatatatactcttcattacattactttatactaactaaaaaactaaccctaattactttgcttataaactagttcatgaatgttgatattcacagtca  14522400                                           <---------ARR14(2)                                        <---------ANAC46                                        <---------ANAC58       <---------ATHB12                 <---------ANAC58                <---------ICU4       ------------>CBF             <---------ANAC58                    --------------->AtSPL8    <---------AHL20(2)              <---------ANAC58       --------->ANAC46       ------------>CBF ---------DOF2                  <------------CBF      <---------MYB59   <---------------AtSPL8 -------DAG2--------->YAB1    --------->ARR11(3) <---------KAN4(2)   --------->YAB1                 - ----HVH21<------------CBF   --------->YAB1--------->ARR14(2)      --------->AHL20(2)             ---   ccttttttaatcaattgtagttcatacactaacatattgtttgcgtatacgaatgacctaaacacaagttttaataagtacttacacaataggcacacag  14522500                                                                    ------------>CBF                              <---------GLK1(2)                    <<<<<<<<<<<<<<<<<LFY                   <------MYB46(1)                                --------->ANAC58                   ----------->GT1                                --------->ANAC46           <-------TEIL   <---------ALFIN1<---------ANAC55(2)                 <---------ARR11(3)          --------------->AtSPL3 ----------->RAV1(1)  ---------->DOF2                  --------->ARR11(3)        --------->ARR11(3) -------->ANAC46   <------MYB83                       <---------CCA1(2)          <---------ARR11(3) ------>ANAC46    --------->MYB59            <-----------HVH21    --------->ANAC58<------ZmHOX2a(2) <   acacaacacatctatatagataggtaaagacataatctcacttctcatgtcatttcatatctcaaaacacgacaatggcacaagatcagtacaagttcgt  14522600                                 --------->MYB46(3)                                 --------->DEAR3(1)                                 <---------MYB46(2)                                 <---------MYB52(2)                                --------->ANAC58                             <------NtERF2                             --------->ATERF1(1)                             ----------->HVH21                            <-----------TGA1                            <---------ATERF1(1)                            <-----------HVH21                           <---------ANAC58                      --------->DAG2                           <---------ANAC58                     ---------->DOF2                  --------->GLK1(2)                            ---------->DOF2                  --------->ARR14(2)                        ------>ZmHOX2a(2)                 --------->ARR14(2) ------->TEIL     <---------ARR14(2)                 <---------GLK1(2) ------>MYB83      --------->ARR14(2) <-----------HVH21             --------->At4g35610--------->ANAC58     <-----------ARR10 --------->bZIP60(2)       ---------->DOF2 --------->SPL7            ----------------->AGL1<---------bZIP60(1) -----------GT1  <---------ARR14(2)------>MYB46(1)   --------->GLK1(2) --------->bZIP60(1)   tttcactgctaaagaagcagaatcggaaggcgtcaccgaacccatgaggcttccaaatctgatcggaaaggcgatgtcactcgctctggctccaatctcc  14522700                                         ------>ZmHOX2a(2)                                        --------->GLK1(1)                                       <---------ARR14(2)                                       --------->ARR11(3)                                      <---------CCA1(2)                                             -                               ------>ZmHOX2a(2)                                                   --                           --------->ANAC58                                                       ---                           --------->ANAC58                                                      <---                        --------->ZAT18<-----------ARR10                              --------->ANAC46                       --------->ANAC58--------->ARR14(2)                             --------->ANAC58                <---------MYB52(1)  --------->ETT(1)                                  --------->ANAC58              <---------MYB46(3)   <XXXXXXXXXXXXXXXXXXXXMIR399D                     --------->AtMYB61             <------NtERF2<---------TOE1(2)                                         <---------ALFIN1-            ------>NtERF2 --------->SPL7<------ZmHOX2a(2)                    ------>ZmHOX2a(1) ------           <---------ARR14(2) <------ZmHOX2a(2)                          ----------------------->TaNAC69(2)           --------->ARR14(2)<---------ARR14(2)                       --------->ARR11(3)       ------          --------->ATERF1(1)--------->ARR14(2)                       --------->ARR14(2)       ------          <------NtERF2--------->ANAC58--------->AGP1           <-----------GT1  <-----------GT1-----   ---------->DOF2<---------SPL7  <-----------HVH21 <------NtERF2     <---------ARR11(3)     <-------   aaatacaaagtcggagccgttggacgcgcacgatcgggtcggatctacttaggcgtcaatgtcgaattaccaggtcttcctcttcaccactccatccacg  14522800                  ------>MYB46(1)                  ------>MYB83                  -------->P                 --------->MYB55(1)                --------->MYB46(3)                --------->DEAR3(1)                                                              <----          --------->bZIP60(2)                                                                <-------          --------->O2                                                                      <--------     --------->ARR14(2)                                                  ----------->HVH21  <--------     <---------ARR14(2)   --------->ANAC58                  <------NtERF2----------->TGA1   <-------- -------->ANAC58<---------MYB111(1)                        <---------ATERF1(1)           <---------RAP2.3(1) ---->NtERF2    <---------MYB55(2)                         <-----------HVH21            <---------DEAR3(1) ------>DEAR3(1)<---------MYB46(2)                         <-----------TGA1             <---------RAP2.3(3) -------CDC5    --------->AtMYB61                          <---------RAP2.6(3)          <---------RRTF1(3) -------->ANAC58<---------MYB111(2)   ---------->DOF2     --------->ANAC46--------->MYB52(1)------>NtERF2 --->ANAC58    --------->MYB46(3)  --------->LBD16        --------->RAP2.6(2)   <---------DOF5.7(2) --->ANAC58<-----------HVH21       --------->HSFB2a(2)  --------->At4g35610   --------->DOF5.7(2)  -- --->ANAC46<-----------TGA1        <---------HSFB2a(2)  <---------At4g35610   --------->At5g28300 --- ->NtERF2 --------->ANAC46--------->ANAC46           <---------MYB52(1)--------->At4g35610  --------- --ALFIN1------>ZmHOX2a(1)--------->ANAC58          <-----------HVH21  <---------At4g35610 --------->DEAR3(1)   ccgagcaattcctcgtcaccaacctcgcactcaactccgagaaaggcctccatctgttagccgtcaccatctctactgacggtaacgatttcggcgcacc  14522900                   <---------ANAC58           ------>NtERF2           <---------RAP2.6(3)          <---------ATERF1(2)          --------->RAP2.3(2)          --------->RAP2.6(2)     <---------HSFC1(2)         --------->At4g35610     --------->HSFC1(2)     --------->ARR11(3) -----ANAC46<------NtERF2   <---------ARR14(2)                   --------->YAB1 --ALFIN1 --------->RAP2.3(3)<------ZmHOX2a(2)          ------>ZmHOX2a(1) -SPL7    --------->ATERF1(2)==================================HOX2a_HOX2a -ZAT14   --------->DEAR3(1)<---------ARR11(3)      --------->ARR14(2) -ABI4(2)--------->ERF1    <---------GLK1(1)        <---------ARR14(2)                 --------->WOX13(1) ------->REM1(2)   <---------ANAC58                 <---------ARR11(3)      --------->At4g35610 ------>ALFIN1  <---------GLK1(2) ---------->DOF2   --------->ARR11(3)      <---------At4g35610  ---- >ZAT14  --------->RAP2.3(1)--------->ARR14(2)--------->TOE2(3) <---------ATHB12    <-----------HVH21   gtgtggaaactgccgccagtttcttatggagatcagcaaagcccttaacatcaaaatcctgctcaaatcaaaatatgaagcagaagggtcattcaagagc  14523000                     --------->GLK1(2)                    --------->ARR14(2)                    <---------ARR14(2)                                           ------->GAMYB<------                    <---------GLK1(2)                                         <---------ARR14(2)                  ----------->ARR10                                 ---------->DOF2           <------             <---------HSFB2a(2)                                  <---------HSFB2a(2)         <------             --------->HSFB2a(2)                                  --------->HSFB2a(2)      <---------            <---------LBD16             ------>ZmHOX2a(1)       --------->HSFB2a(2)       <----------DOF2          ------>ZmHOX2a(1)   ------>NtERF2                     <---------HSFB2a(2)       <---------DAG2       ------>ZmHOX2a(1)     --------->LBD16---------->DOF2  ------>ZmHOX2a(1)--------->ARR14(2)  <-- ----->TOE2(3)--------->LBD16----------->HVH21         <---------ALFIN1       --------->MYB52(1)  ---   cttagactcctccttccggacagattctctcccgacgatgtcctcccaaagggttcccctctccttctcgagaagcgccataactgcctcagcctttcgg  14523100  Previous    Next  AGI:  At4g29630.1    Description:  cytidine deaminase, putative / cytidine aminohydrolase, putative. similar to cytidine deaminase, putative / cytidine aminohydrolase, putative [Arabidopsis thaliana] (TAIR:AT4G29600.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ74239.1); contains InterPro domain CMP/dCMP deaminase, zinc-binding; (InterPro:IPR002125); contains InterPro domain Cytidine deaminase-like; (InterPro:IPR016193); contains InterPro domain Cytidine deaminase, homodimeric; (InterPro:IPR006263); contains InterPro domain Cytidine and deoxycytidylate deaminase, zinc-binding region (InterPro:IPR013171) Range:  from: 14522575    to: 14523246    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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