Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <---------------AGL15                                                --------------->AGL15                                          --------------->AtSPL8                          <---------ARR14(2)                   <-------TEIL        --------->ARR11(3)                 --------->ANAC46--------->ARR14(2)             <---------AHL20(2)--------->ANAC46----------------->AGL3     --------->ANAC55(2)   -----   <---------HSFB2a(2)         --------->bZIP60(2)                        --------->ANAC55(1) <------   --------->HSFB2a(2)       --------->ANAC46  <-----------------AGL3     <---------ANAC55(2)--------   catttttagaagcattttatatacatctaacacacatcacacatcttgtactatttttagtttgaaattttcaaacacataattctatatcagatttgac  14519500                                                                  <-----------GT1                                                                 <---------YAB1                                                                --------->YAB1        <---------ICU4                                         <---------ICU4         --------->TOE2(3)       <---------AHL20(2)     <---------LBD16                 --------->ICU4  --------->ATHB12  --------->YAB1           --------->At4g35610     <---------AHL20(1)         -------->ATHB1 ---->ZAT6                 <---------ZAT2          <---------AHL20(2)         <---------ICU4 -----GT1                  <---------At4g35610     --------->AHL20(2)        <---------ATHB12 --->HVH21             --------->ANAC46           --------->AHL20(2) <---------ZAT6   --------->YAB1-   actatcaaaataatcgctatgctacaggctgctacggacaattgaactagcattaaatttgatcaatattactgttcaaatcattgaatgttaatgctaa  14519600                          <----------DOF2                          <---------DAG2                       <-----------GT1                   <---------AHL20(1)                   --------->AHL20(1)                   --------->AHL20(2)                   <---------AHL20(2)                                                             <--                  --------->AHL20(2)                               <----------DOF2               <---                 <---------YAB1                           --------->TOE2(3)  --------->DAG2      <---               --------->YAB1                             --------->TOE1(3) ---------->DOF2     -----               <--------HAHB4                            --------->ZAT6<---------ANAC58        <-----              <---------YAB1                   ----------->GT1 <---------MYB111(1)         ------->TEIL --------->DOF2<---------ICU4          <-----------GT1 <-----------GT1 <---------ANAC58 <---------YAB1   ataaaagttaagaactatcattatattactttatattctatatactaactagaaaattaaccctaactactttgcttaaaaagctagttcatgaatgttg  14519700                                                    <---------ARR14(2)                                                 <---------ANAC46                                                 <---------ANAC58                                      --------->ANAC55(2)                                     <---------TOE2(3)                                            --- -------WOX13(1)                    --------->MYB52(1)    <---------KAN4(2)                   ------- ------ANAC58                     <---------MYB52(2)--------->ARR14(2)                   ------------ ------ANAC58              <---------ZAT18       <---------ANAC58                   <---------ANAC58 ---->ATHB12<----------DOF2--------->ZAT18   <---------ANAC58                       <---------ANAC58 ----YAB1  <---------DAG2  --------->ZAT14   <---------ANAC58  <---------MYB59---------->DOF2--------   attgtcacaatcacctttttatcttgtagttcacacactaacgtattgtttgcgtatacgaatgacctaaacacgattttaaaagtgcttacacaataag  14519800                                     ------>MYB83                                     ------>MYB46(1)                                 <---------ARR11(3)                    ----------->TBP<---------MYB59                    <---------AHL20(2)                    --------->AHL20(2)       --------->ANAC46   ----------->GT1                                                --------->ANAC58 ------>ZAT18 ------------>CBF   --------->ARR11(3)                  *TSS                --------->ANAC58 -->YAB1  <---------ALFIN1<---------ANAC55(2)               --------->YAB1               --------->ANAC46 >CBF--------->ANAC46    --------->MYB59                   <---------YAB1  --------->AHL20(2) -->DOF2----------->RAV1(1)  ---------->DOF2       <---------At4g35610   --------->TOE2(3)<<<<<<<<<<<   cacacagacacaacacatcaatataaataggtaaagacctaatctcacttctcatctcattttcatagctctcaacataaaatcacaaaacacgacaatg  14519900                                               --------->AHL20(2)                                           ------>MYB46(1)                                    <-----------HVH21                                 ------>ZmHOX2a(2)                                --------->ARR14(1)                                --------->CCA1(2)                                <------ZmHOX2a(2)                               <---------ARR14(3)                               --------->ARR14(3)                               <---------AGP1  <---------AHL20(2)                               <-----------ARR10                               --------->ARR11(3)                               <---------ARR11(3)                               --------->ARR14(2)                        <---------DEAR3(2)        ------>ZmHOX2a(1)      --------->AGP1 --------->AHL20(2)        ------>ZmHOX2a(2)        ================================HOX2a_HOX2a                    <------ZmHOX2a(2)        ===============================HOX2a_HOX2a                    <---------ARR14(2)       <---------MYB59         <---------ARR14(2)                     --------->ARR14(2)  <---------At5g28300 <---------ALFIN1          <---------AtLEC2------>MYB83 <<<<<<<<<<<<<<<<<LFY      <-------TEIL  ----- <<<<<<LFY                 ----------------->AGL1    <---------ICU4   <---------ARR11(3) <-----------GT1   gcacaacgtcctaacttgttatctcatttgcaagatctggtcaccaaatttaaaaacatgacaatggcacaagatcggttcaagttcgttttcactgcca  14520000                        ------>MYB83                        -------->P                        ------>MYB46(1)                      <---------MYB55(2)                      <---------MYB46(2)                      --------->DEAR3(1)                      --------->DEAR4(1)              --------->DAG2                      --------->MYB46(3)             ---------->DOF2                     --------->DEAR3(2)   --------->GLK1(2)                  ----------->HVH21       --------->ARR14(2)                                        -              <------MYB46(1)             <---------ARR14(2)                                        <  <---------ZAT2 <-----------HVH21        <-----------ARR10                                        <-  --------->ZAT2--------->ALFIN1      ----------------->AGL1<---------O2                           -- ---->MYB52(1)<------MYB83   <-----------HVH21      ---------->DOF2      <---------ATERF1(1)---------   acgaagcagcgttggaaggtgtcaccgaccccatcagacttccaaatctgatcagaaaggcgatgtgtctcgctcgggctccaatctccaaatacaaagt  14520100                                                                                         --------->ANAC58                                                                                        ------>NtERF2                                                                                       --------->DEAR3(1)                                                                                      <----------CDC5                                                                           --------->ANAC58            --------->ANAC58                                               --------->ANAC46     <---------MYB52(1)                                                  --------->AtMYB61    -------   <---------MYB46(3)                                         ----------------------->TaNAC69(2)  <------NtERF2                                            --------->ARR11(3)       --------->ANAC58 ------>NtERF2                                             <---------ARR11(3)       --------->ANAC46 -------->ARR14(2)                                         --------->ARR14(2)     <---------ALFIN1 ---------ARR14(2)                                       --------->LBD16 <---------ALFIN1--------->ANAC58 -----NtERF2--------->ANAC58                    <---------ETT(2)      <-----------GT1------>NtERF2--- ------->ATERF1(1)        <---------DEAR3(2)    --------->ETT(2)  ------>ZmHOX2a(1) --------->ANAC58 ->DOF2<---------SPL7  <-----------HVH21 <------NtERF2   <---------TOE1(2) --------->ANAC58   <------   cggagccgttggacgcgcatcatcaggtcgggtctacttaggcgtcaatgtcgacttcccaggtcttcctcttcaccactccatccacgccgagcaattc  14520200                                                               --------->MYB52(1)       ------>MYB46(1)                                      --------->At4g35610       ------>MYB83                                 <------NtERF2                             -------       -------->P                                  ------>NtERF2                              <------      --------->MYB55(1)                          --------->DEAR3(1)                      --------->LBD16     <---------MYB46(2)                           <---------ETT(2)                      --------->SPL7     --------->MYB46(3)                         <---------ATERF1(1)       --------->ARR14(2)<--------     <---------MYB111(2)   ---------->DOF2     --------->DEAR3(1)         <---------ARR14(2)---------     <---------MYB59    --------->HSFB2a(2)  <---------At4g35610  ------>NtERF2         <---------LBD16     <---------MYB111(1)<---------HSFB2a(2)  --------->At4g35610--------->RAP2.6(3)    --------->ALFIN1 -->ARR14(2)   --------->ANAC46       <---------MYB52(1)    <---------At4g35610   <---------ALFIN1 --->ZmHOX2a(1)--------->ANAC58--------->ARR11(3)<------NtERF2----------->HVH21 <---------ALFIN1 ---ARR14(2)   --------->ANAC58<---------ARR11(3)--------->ATERF1(1)  <------NtERF2   <---------SPL7-   ctcgttaccaacctcgcactcaactacgagaaagacctctgtaagttagccgtcgccatctctactgacggcctcgaattcggcacaccgtgcggaaact  14520300                                                                                   --------->TOE2(3)                                                                             <---------HSFB2a(2)                                                                             --------->HSFB2a(2)                                                                         --------->KAN4(2)                                                                        --------->KAN4(1)                                                       ---------->DOF2  <---------KAN4(1)                                                      --------->AtMYB61<------ZmHOX2a(2)      <---------ARR11(3)                     =================================HOX2a_HOX2a -->HSFC1(2)                             --------->GLK1(2)             =============================HOX2a_HOX2a ---HSFC1(2)                  <----------DOF2------>ZmHOX2a(1)         ============================== -ARR14(2)                <---------ZAT18--------->ARR11(3)           <---------ARR11(3) >ARR14(2)                ------->GAMYB  <---------ARR14(2)           --------->ARR11(3)        ----- ----->NtERF2   <---------At4g35610      --------->ARR14(2)          <------ZmHOX2a(1)       ------>ZmHOX2a(1)   gcctccaatttcttatggagatgagcaacgcgcttgatatgaaaatcctgtccaaaccaaagcatgaagcaggatcattctcgagccttagactcctcct  14520400  Previous    Next  AGI:  At4g29620.1    Description:  cytidine deaminase, putative / cytidine aminohydrolase, putative. similar to cytidine deaminase, putative / cytidine aminohydrolase, putative [Arabidopsis thaliana] (TAIR:AT4G29600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65371.1); contains InterPro domain CMP/dCMP deaminase, zinc-binding; (InterPro:IPR002125); contains InterPro domain Cytidine deaminase-like; (InterPro:IPR016193); contains InterPro domain Cytidine deaminase, homodimeric; (InterPro:IPR006263); contains InterPro domain Cytidine and deoxycytidylate deaminase, zinc-binding region (InterPro:IPR013171) Range:  from: 14519869    to: 14521093    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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