Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    <---------AHL20(2)                     ----------->GT1 <----------DOF2              --------->AHL20(2) --------->AHL20(2) -TEIL        --------->ANAC58    --------->ARR11(3)           --------->YAB1        <---------AHL20(2) ->GT1<---------AtLEC2            <---------ARR11(3)          <---------AHL20(2)    <---------YAB1 <- -----AtSPL8  --------->ANAC46 --------->AHL20(2)            --------->AHL20(2)----------->GT1     -- ---->AtSPL8  --------->ANAC58 <---------AHL20(2)      <-----------GT1    --------->YAB1     --------   attcatatgcatgaacaagcaatttgtgaaaaataaaatcttttagttttctatatataactatataataaaactatcaaaatgttattaattaagagta  14509800                                                                                          --------->YAB1                                                                                         <---------YAB1   --------->ZAT6                              --------->At4g35610                 <---------ANAC46 --------AHL20(2)                 <-----------GT1 ---------->DOF2              <-------GAMYB ------->AHL20(2)    <-----------GT1     <---------YAB1                       <---------MYB46(3)  <-- --->GT1   <-----------GT1   <----------DOF2 --------->YAB1             ---------->DOF2--------->WOX13(1)   atttaagactattaaaccatattttacatctcttttttacattactatcatctaaagtagttttctagtttttaaaaagatggttgagtctatcataagt  14509900                                                                  <---------ANAC58                                                                  <---------ANAC55(2)                                                                  <---------ANAC46                                                                  <---------ANAC55(1)                                                         <---------ANAC46             <---------ANAC46                                                       <---------ANAC46    <---------WOX13(1)                                              <---------AHL20(2)  --------->ANAC55(2) <---------ANAC55(2)                                            ----------->TBP       <---------ANAC58   <---------TOE2(3)                                            --------->AHL20(2)<---------ANAC58    <---------WOX13(1)                                            <---------AHL20(2)<------------CBF   <------------CBF                                          ----------->TBP<---------ZAT6   <------------CBF         <-      ----------->GT1                   --------->AHL20(2)    <---------ANAC58 <---------YAB1      --  <---------YAB1                  <----------DOF2    <---------ZAT14     --------->ATHB12   --------- --------DOF2         ------------>CBF<-----------TBP--------->ZAT14    <---------YAB1--------->ANAC55(2)   ctttctgatagtgaatataagagtcacaatcaccttctttttttatatatatatgtgtagtgtggattgcgtatgtgattgaagattgacgtaaacacca  14510000                        --------->TGA1a--------->ANAC46                ---------->DOF2   --------->ANAC46                ==================bZIP_DOF        --------->ANAC58--------->O2--------->ZAT14     --------->TOE1(2)  --------->bZIP60(2)     --------->RAP2.6(3)       <---------ANAC58   <---------------AtSPL8     ----------->RAV1(1)                   <---------ARR11(3)   <---------------AtSPL3    --------->ANAC46  --------->ARR14(2)   <---------GLK1(2)   --------->DAG2       --------->ANAC46 --------->ANAC46           --------->ARR11(3)  ================================bZIP_DOF   ----------->HVH21    <---------TOE1(3)  ---------->DOF2       --------->ANAC58 --------->ANAC58         ----------->ARR10      <---------CCA1(2) --------AHL20(2)       ======================MYC_MYB             <---------YAB1 ------>ZmHOX2a(1) ------->AHL20(2)     --------->ANAC46------->GAMYB    ----------->TBP    <---------ANAC58   <------- >ANAC46--------->ANAC58--------->ANAC58 --------->ANAC58         <---------TOE2(3)    <---------CCA1(2)   tttaaaaagtacgatactaaatgcacacgacacaacacaacacacaccagaccggctataaataagttaagattttgcttctcctcttcttatctctttt  14510100                                                                     <---------MYB52(1)----------->RAV1(1)                                                                <---------ALFIN1   --------->ANAC58--                                                             --------->LBD16<---------At4g35610    --                      ----------->RAV1(1)                  ------->GAMYB    ------>NtERF2 ------->GAMYB                     --------->MYB46(3)       ------------>CBF<---------ALFIN1     --------->ANAC58<-            --------->AHL20(2)            ---------->DOF2 --------->MYB46(3)--------->At4g35610   <-- ---DOF2  --------->TOE2(3) -------->P<----------ID1    <---------ALFIN1<-----------RAV1(1)   -------   ccactctctcaacataaaatccaacaacacaacccgaattaagacaaagacaatggcacaacccccaaacccttatgccgctctcactccaacagaagca  14510200              <---------ANAC58                                                                     --           <----------DOF2                                                                         <-       ------>NtERF2                              <---------HSFC1(2)                               <-      --------->LBD16                             <---------ATERF1(1)                             <--      ------>NtERF2                ------>NtERF2  --------->At4g35610                            <---     --------->DEAR3(1)            --------->At4g35610                                           ----    <---------LBD16              <---------RAP2.6(2)                                            <----   ------>ZmHOX2a(1)        <----------DOF2       --------->HSFC1(2)                            <---- ------->GLK1(2)    --------->ANAC46             <---------DEAR3(1)                            ------ ------->ARR14(2)   --------->ANAC58            <---------ZAT18    <-----------ARR10--------->ANAC58 --------ARR14(2)   --------->LBD16<---------At4g35610 <---------ALFIN1         <-----------HVH21<--- -------GLK1(2)     --------->ANAC58      --------->WOX13(1)   <-----------RAV1(2)  --------->ANAC58< -->At4g35610 <---------ANAC58 <-----------RAV1(1)<---------At4g35610 <---------ALFIN1        -------   gaatcctccggccctttcgagcccgaaacccttttgccgctgatcaatcgggcgcttccactcgctcaggctctaccctcgcagtcacccctcgtagccg  14510300         --------->YAB1        <------ZmHOX2a(2)       --------->ARR11(3)       <---------ARR11(3)                                                                <---------ANAC58       <---------ARR14(2)                                                                <---------ANAC46       --------->ARR14(2)                                                       ------>NtERF2      <------ZmHOX2a(1)                                                         --------->LBD16   <------NtERF2                                                             ------>NtERF2 ---->NtERF2                                                                --------->ANAC58 --------DEAR3(2)                                                           --------->ANAC46 --------SPL7                                                               --------->ANAC58  <------ -------DEAR3(1)                                                   --------->ANAC58   --------->ARR14(2) ---NtERF2                                                         --------->ANAC58   <---------ARR14(2) ----->ATERF1(1)     <---------HSFB2a(1)                         <---------ALFIN1    <---------At4g35610 -------HVH21        <---------HSFC1(2)                         --------->ZAT14--------->DEAR3(1) -----ATERF1(1)      --------->HSFB2a(1)                      --------->ANAC46 <---------ANAC46 --->DEAR3(1)        --------->HSFC1(2)                 ---------->ID1    <---------ALFIN1    <------ ------MYB52(1)     --------->ARR14(2)                ----------------------->TaNAC69(2) <---------ANAC58 ------NtERF2       <---------ARR14(2)       <-----------GT1 ------>ZmHOX2a(1)<---------LBD16-------- -->ATERF1(1)  <-----------HVH21 <------NtERF2   <---------TOE1(2) --------->ANAC46 <---------MYB46(3)   tcggccgaggatcatcaggtcggaccttcttaggcgtcaatgtggaattaccaggtttgtctcctctccactccatccacgccgggcagttccttgtcgt  14510400                           --------->ZAT14                           <---------ZAT14                         --------->ANAC58                                             ------>NtERF2                         --------->ANAC58                                          --------->At4g35610                         --------->ANAC46                                          --------->ZAT14                       --------->ZAT6                                              <---------At4g35610                    <---------ZAT18                       ------>ZmHOX2a(1)        --------->ZAT2  -- ---ANAC58          --------->ZAT18                    ------>NtERF2               <---------ZAT2  -- ---ANAC58      ------->GAMYB<---------At4g35610 --------->MYB52(1)               <-----------RAV1(1) -->ID1     --------->MYB46(3)                ------>ZmHOX2a(1)                <---------ALFIN1    --   ccatctcgccctcaacaacgagcgaacactcaactgcttagccttctcctcaaacggctcctacttcgaccctccatgtccccactgctgccaacttctt  14510500                                                 --------->LBD16                         --------->ARR11(3)                                                 ------>NtERF2                           <---------ARR11(3)                                                 <-----------HVH21                 --------->LBD16                                                --------->ANAC58                  --------->ANAC46                                                --------->ANAC46                  --------->HSFB2a(2)                                                --------->ANAC58                 <---------LBD16                                        ------->TEIL------>NtERF2               ------>MYB46(1)                                     --------->ANAC58                           ------>MYB83             <---------ANAC46        --------->ANAC55(2)                    ------>MYB46(1)             <---------ANAC58        <---------ANAC55(2)                    -------->P   --------->AHL20(1)             <---------ANAC58        --------->ANAC46                     <---------MYB111(2)         ---------->DOF2 ------>MYB46(1)<---------TCP20  ----------->RAV1(1)------>MYB83--------->YAB1  <---------GLK1(1)      ------>MYB83--------->ANAC58<------NtERF2        <---------MYB46(2)  --------->GLK1(1)    <---------MYB111(1) <---------ALFIN1<---------O2   <---------MYB59<---------AHL20(1) ------->ANAC46        <---------MYB46(2) --------->MYB46(3)       <----------DOF2<---------HSFB2a(2) ------->ANAC58        <---------MYB59  --------->PCF2  ----------->HVH21 --------->AtMYB61 ------->ANAC58  --------->HSFB2a(2)<---------LBD16--------->DEAR3(1)     <---------MYB111(1)   -----   caagaaatccgaaatgcgtctagtaccaaactcttgatcacggacccatcccgccagcgcgacatgtctctttcgacctaccttccgcaaaaatatttgt  14510600                --------->LBD16               --------->ANAC58               --------->LBD16                ---------->DOF2   <---------ALFIN1               --------->ANAC58 --------->ANAC58         --------->RAP2.6(3)              --------->HSFB2a(2)      --------->HSFB2a(2)     <------NtERF2              <---------HSFB2a(2)      <---------HSFB2a(2) ------->GAMYB ----->ID1  --------->PCF5      --------->ANAC58        --------->MYB52(1)            <-----------HVH21   ccctctacaatgaggtcccgaaatacttcttcgctcgccttctcgacgaaaatcgcaataacggcctcaccctcattaatcccaatcccatcagagactg  14510700  Previous    Next  AGI:  At4g29580.1    Description:  cytidine deaminase, putative / cytidine aminohydrolase, putative. similar to cytidine deaminase, putative / cytidine aminohydrolase, putative [Arabidopsis thaliana] (TAIR:AT4G29570.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ49633.1); contains InterPro domain CMP/dCMP deaminase, zinc-binding; (InterPro:IPR002125); contains InterPro domain Cytidine deaminase-like; (InterPro:IPR016193); contains InterPro domain Cytidine deaminase, homodimeric; (InterPro:IPR006263); contains InterPro domain Cytidine and deoxycytidylate deaminase, zinc-binding region (InterPro:IPR013171) Range:  from: 14510153    to: 14511049    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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