Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 ------------>MYB.PH3(2)                   --------->LBD16--------->MYB111(2)                                        <-------TEIL     <---------ANAC46        --------->DAG2       --------->ARR11(3)                        ---------     <---------ANAC58       ---------->DOF2       --------->GLK1(2)                        <---------ARR14(2)     <---------ANAC58    <---------TOE2(3) >>>>>>>>>MYB2                                   --------->ARR14(2) ---bZIP60(1)     <---------ANAC46--------->MYB46(2)                                 <-----------GT1 -->ANAC46       <---------LBD16  --------->MYB59<---------GLK1(2)                <----------DOF2 -->bZIP60(1)   ------>ZmHOX2a(1) --------->MYB111(1)                             ------>ZmHOX2a(1) -->ETT(2)    ----------->RAV1(2) --------->MYB52(2)        <-----------GT1    <------ZmHOX2a(2)-----   catttttgcttgtttctcctgcggattaagaaaagttagttagaaaaccaagaatcttgttttttctatgcatagctatcgatccttttaccagatacac  14501800                                                                                                   --                                                                                                  ---                            --------->ANAC58                                                      <--                            --------->ANAC46                                                      <--                            --------->ANAC58                                                     <---               <------ZmHOX2a(2)                        <---------ARR14(2)                       <---   ---------->DOF2 --------->ZAT6                       --------->ARR14(2)                       <--- >CCA1(2)     --------->ARR11(3)                 <---------AHL20(2)                              ---- ---->ANAC46  <---------ARR11(3)                 --------->AHL20(2)       --------->HSFB2a(2)--------   caaaaaaaagaaacaagatcaacactacataagccaagtattagcatccatttaaacaaatccaggctcaattctactagacccgatgaataacccaaag  14501900          --------->ZAT14   <---------At4g35610   --------->ZAT2   --------->At4g35610   <---------ZAT14   --------->ZAT14                                                --------->ANAC46   <---------ZAT2                                       <--------ATHB1 ---->ZmHOX2a(2)                                        --------->ATHB12        --------->MYB52(1) ------>GLK1(1)                                         <---------ICU4          ------>MYB46(1) -------GLK1(1)                                         --------->YAB1        <---------MYB59 ----ZmHOX2a(2)                                        --------->ICU4         <---------MYB46(2) ------AGP1                                     --------->GLK1(1) --------->ANAC58 ------ARR11(3)                                 --------->At4g35610    --------->STY1(2)       <----- --------ARR10                    ---------->DOF2  <-------TEIL   <---------YAB1------>MYB83  <------ ----->ARR11(3)       ---------->DOF2 ---------->DOF2  <---------ATHB12<---------STY1(2)   <-------TEIL -->DOF2  <---------ZAT14     ---------->DOF2 <------ZmHOX2a(1)   --------->ANAC58       --------->TOE2(2)   atctctgctcagaacagagcataccaaagaaaaaaagaaagaaagagaggagatgcaatgatttcattacgctagctagacctaactgttacatacgttc  14502000                      --------->ANAC58                      --------->ANAC55(1)                                              --------->WRKY38(1)                      --------->ANAC55(2)                                              --------->WRKY12                      --------->ANAC58                                          --------->WRKY38(1)                      --------->ANAC46                                          ----------->HVH21                     <---------LBD16                                            <---------ETT(2)                   <---------REM1(2)                                            --------->ETT(2)                   <---------ZAT14                                              --------->WRKY12                   --------->ZAT14     ----------->GT1            ---------->DOF2      ----------->HVH21           <---------ANAC58         --------->DAG2              --------->CCA1(2)<---------WRKY18(1) --TEIL    <---------ANAC58       ---------->DOF2            ----------->GT1 <---------ZAT6 ---MYB52(1)<----------DOF2   ---------->DOF2              ---------->DOF2   <-----------RAV1(1)   gctatagtttctggctttctgtacacggaatgcaaagaaagggggaaaacaaaaatttgagaaaagataaaagacgttactgttgaccggtgaccaagta  14502100            --------->ANAC58            --------->ANAC58           <------NtERF2          ------>NtERF2         <---------DEAR3(1)         --------->DEAR3(1)         ----------->HVH21        --------->RAP2.3(1)        <------NtERF2        --------->ATERF1(1)       ------>NtERF2       --------->LBD16--------->LBD16       <---------DEAR4(2)       <---------RAP2.3(1)                   <---------YAB1       <---------ATERF1(1)      --------->DOF5.7(2)      <---------DEAR3(1)        <---------MYB52(1)                      --------->ZAT2      --------->ATERF1(2)      --------->TOE2(3)  <------MYB46(1)       <---------ZAT2    <-------TEIL      <---------ATERF1(2)   --------->ARR11(3)    <------MYB83     ------->TEIL     --------->YAB1      --------->DEAR3(1)    <---------ARR11(3)--------->ATHB12------>MYB83         ----------->GT1     <---------LBD16<---------LBD16         <---------TOE2(3) ------>MYB46(1)--------->At4g35610   gacaatagccggcgacgaaataagcgggaatatcgttatccaatttgacgattggtccaaaaccaaatgagcctagcagagcggaatgaaaatacatcgg  14502200                                                         ------>NtERF2                                                         --------->LBD16                                                        --------->ANAC58                  *TSS          <----------DOF2         --------->ANAC58             <---------CCA1(2)<---------ANAC58          --------->ANAC46         <---------ANAC46     <---------ANAC58          ------->GAMYB        <------NtERF2       <-----------GT1            --------->MYB46(3)       ------>NtERF2     <---------ICU4                --------->SPL7                          ------      <---------DEAR3(1) <---------AHL20(2)          <---------SPL7                           <------    --------->MYB52(1)   --------->ATHB12       <---------MYB52(1)                      <-------TEIL   ----------->HVH21    <---------YAB1         <-------GAMYB                        <---------TOE1(2)   tctaaacgacggcgtttatctgaatatttattgcctttctacttgtctccgttgccatccgccaaatcgacgaagacgacgattaccaggttcatgaaat  14502300                                                                                       --------->HSFB2a(2)                                                                                       <---------HSFB2a(2)                                                                                      <---------LBD16                                   <---------AHL20(2)                              <----------DOF2                              ------>ZmHOX2a(2)                                  --------->At4g35610                             <------ZmHOX2a(2)                                   <---------At4g35610                            --------->ARR11(3)                                   --------->ZAT2                            --------->AGP1                                     <---------ALFIN1        <----------DOF2     <---------ARR11(3)        <---------ZAT14        ----------->RAV1(1)        <---------DAG2      <---------ARR14(2)        --------->ZAT14     --------->ANAC58   -------- --->ARR14(2)               <---------AGP1           <----------DOF2      --------->ANAC58<---------ARR14(2) ---GLK1(1)  <---------YAB1<---------CCA1(2) <---------WRKY38(1)          --------->ANAC46--------->ARR14(2)   ctgcttctcacttttattttagccatcgtagatctattttcttatggtcaattcgcttcagtgttttgaaattttgaagccacagctttctggatttgta  14502400                                                                                     --------->ICU4                                                                               <-----------ARR10                                                                               <---------ARR14(2)                                                           <---------ANAC46    ------->TEIL                                                          ------>NtERF2        <---------ARR11(1)                                         <---------At4g35610                   --------->ARR14(2)                                         --------->At4g35610             --------->AtMYB61          <                                  --------->CCA1(2)     <---------DEAR3(1)    <---------CCA1(2)     <                                 --------->ARR11(3)    --------->At4g35610    <---------ARR14(1)    <       <---------YAB1            --------->ARR14(2)    <---------At4g35610--------->MYB52(1)        <    --------->ARR14(2)           <---------ARR14(2)  --------->MYB46(3) --------->MYB46(3)         <-    <---------ARR14(2)          <------ZmHOX2a(1) <---------ETT(2)      <---------ABI4(2)  ------->TEIL --->GT1                      <---------TOE2(3)   --------->ETT(2)      <---------MYB55(2)<---------CCA1(2)   atttcgaatatgaaaatcgactgaaattgttttaggatatggaagcagtcgatcgaccgctgcgcattgaagaaaccaccgtatctcatgatgtatctag  14502500                                                             --------->MYB52(1)                                                     <---------AtLEC2                                                   <---------HSFB2a(2)                                                  ------>ZmHOX2a(2)                                                --------->ARR14(2)                                                <---------ARR14(2)                                                --------->ARR11(3)             --------->YAB1             ---------->DOF2                    <---------AGP1              <---------ICU4 ---------ANAC58                             --------->HSFB2a(2)           --------->ICU4 ---------ANAC58                           ----------->RAV1(2)           --------->YAB1 ---------RAP2.6(2)                  --------->MYB46(3)     ----------->TGA1--------->YAB1 ---------ANAC46              --------->AHL20(2)<---------ARR11(3)      <---------YAB1 ------->TEIL --------LBD16         ----------->GT1   --------->AtMYB61  ----------->HVH21 ----------->TGA1   ttgcggttttatatcgaaagaagaatggttaaataaacatccaccatctggatctggatggactgacgaagatgatgataatgacgatgtatttagtagc  14502600                                                                                    <---------WRKY18(1)                                                                                   --------->WRKY12                                                  --------->HSFB2a(2)              ----------->HVH21                                                  <---------HSFB2a(2)     <---------YAB1                                              --------->AtMYB61           --------->ICU4                                          --------->MYB46(3)            --------->YAB1                                         <------ZmHOX2a(2)             <---------YAB1    --------->LBD16                                        --------->ARR14(2)  --------->MYB52(1)     --------->WRKY38(1)                       ----------->TGA1------->GAMYB<---------AtLEC2   --------->ICU4  <---------LBD16                       ----------->HVH21<---------ARR14(2) ----------->HVH21      <--------P<--------         ---------->DOF2            --------->MYB52(1)     ----------->TGA1   <-----------RAV1(2)  --   agttttatatcgaaagaagaattgtctgacgctgtacataacgatccaccatctggatggactgacgaagatgatgatgatcaggttgacccggctttgg  14502700  Previous    Next  AGI:  At4g29548.1    Description:  unknown protein Range:  from: 14501982    to: 14502197    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g29550.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G20620.1); contains InterPro domain Protein of unknown function DUF626, Arabidopsis thaliana (InterPro:IPR006462) Range:  from: 14502218    to: 14503853    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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