Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        <---------ZAT2 --->ZmHOX2a(2)                                                       --------->ZAT2 ------GLK1(1)                                                        <---------At4g35610 ---ZmHOX2a(2)                                                       ------>ZmHOX2a(1) ---->ARR11(3)                                           --------->MYB52(1) -----ARR14(3)                                 <---------ZAT14   --------->ARR14(2) ---->ARR14(3)                                 --------->ZAT14   --------->GLK1(2) -------ARR10                    --------->ANAC58        ----------->RAV1(1)                   ------ -----ARR11(3)                   --------->ANAC58       --------->MYB46(3)          --------->At4g35610 -----AGP1                     <<<<<<<<<WRKY18 --------->ZAT18   <---------ARR14(2) <---------At4g35610 -----ARR14(2)                --------->WRKY18(1)    <------ZmHOX2a(1)--------->At4g35610  --------->YAB1 ---->ARR14(2)      ---------->DOF2        --------->ALFIN1 ------->GAMYB       <-----------HVH21   tctcagacaatcccttactgatcaaagcagaagtcaaggaatggagtagtgcagaggaacaacagagaatcctgctgcaacttgtcagcacaataacaaa  14497300                                                            <---------WOX13(1)                      <                                                         --------------->AGL15                      -                                                      <-----------GT1--------->DAG2              ----                     --------->ZAT6                <---------ZAT6  ---------->DOF2         --------->MYB52(2)        --------->YAB1                          <---------ICU4  --------->AtLEC2           <---------MYB46(3)       <-------TEIL--------->YAB1        ----------->GT1 --------->ICU4      ---------->DOF2 -------- ---->DOF2   --------->ZAT6  <----------DOF2 --------->YAB1 <---------YAB1 <---------YAB1 -----------   agaagaagattcataacacaataacactaggctttgtttagagtcgataataagtgttactgattaatgcaaaggtgatgaaagaacatttgtttgttcc  14497400                                                                                  --------->YAB1                                                                                 --------->AHL20(2)                                                      -------->P               --------->TOE2(3) ---------ZAT14                                  <---------WOX13(1)           --------->REM1(1) -------->ZAT14         <----------DOF2       --------->AHL20(1)             <-------TEIL -->ZmHOX2a(1)         <---------ANAC58       <---------AHL20(2)         --------->ANAC58 -->ID1                <---------ANAC58       --------->AHL20(2)         --------->ANAC58          -- ---->AtSPL8 ---------->DOF2                 --------->AHL20(2)        ---------->DOF2             <-   tcttcactaaattgataaaggcattgctttgtgtcatggtaatggaaattaattgctaccagcgtttaaactcaaaagctacattaaaaatgaaggaatt  14497500                              <---------ANAC46                              <---------ZAT6                           ----------->GT1                              ----------->GT1                 --------->ATHB12                         <------MYB83                        <---------YAB1                         <------MYB46(1)                 --------->ARR11(3)                    <-----                --------->AHL20(2)                       --------->ARR14(2)                <---------AHL20(2)  ---------->DOF2<---------AHL20(2)                 ------->TEIL<---------WOX13(1)      ----------->GT1 ------->At4g35610      --------->MYB59  ----------->GT1 <---------ARR11(3)        ---------->DOF2 --------At4g35610  <---------YAB1     ---------->DOF2   <---------ARR14(2) --------->GLK1(2)  ------   tagctaaagctcattcgattttatatttggtagtgtatatcaaaagaaaaaatgtatcagatattgattgaaactgaaaatccaaaaaagaagttaattt  14497600                                                                                 <-------MYC3                                                                                 <-------PIF5                                                                                 <-------PIF4                                                                         <---------ANAC58                                                                         <---------ANAC58                                                                       <------ZmHOX2a(2)                                                                ----------->HVH21------->PIF4                                                               ------->MYC3      ------->MYC2                                                               <-------MYC3     --------->ANAC55(2)                                                              <---------bZIP60(1)------->MYC3                                                              --------->O2      --------->O2                                                              --------->bZIP60(2)------->MYC4                                                              <---------O2      <---------ANAC46                                                              <---------ANAC55(2)<-------MYC4                                                              --------->ANAC55(2)------->PIF5                                              --------->At5g28300   ------>ZmHOX2a(2)                                             ----------->GT1  --------->bZIP60(1)<-------MYC2                                            --------->ZAT6    --------->TGA1a   <---------ANAC55(2)                                           ------>MYB83       <---------ANAC46  <---------TGA1a                                           ------>MYB46(1)  <-------------DYT1  --------->TGA1a     --------->DAG2               --------->AHL20(2)        ------------->DYT1  =====================    ---------->DOF2      ===============================================bZIP_DOF<---------O2 ----AHL20(2)            ---------->DOF2  ----------->RAV1(1) <---------TGA1a  ------------>OsbHLH66 --->AHL20(2)     --------->ZAT6  <---------AHL20(2)      <-----------HVH21   <------------OsbHLH66   tttgcaaaaagttggaactatcacttcaaaagaaatttatataccaacagtaaaaaactaagtcacgtgatcgatccttggcacgtgtgaaatttcatca  14497700                                                                              --------->ICU4                                                                          <------NtERF2                                                               <---------WRKY38(1)                                                               <---------ETT(2)                                                               <---------WRKY12<---------ICU4                                                               --------->ETT(2)--------->ATHB12                                                               <---------DEAR3(1)<---------GLK1(1)                                                           <---------AtMYB61  <---------YAB1                                                     <---------AtMYB61    ------>NtERF2                                                   --------->ALFIN1      --------->ANAC58   =========                                                   <---------ANAC46      --------->ANAC58   ---------                    <---------ANAC46             <---------ANAC46        --------->ANAC46--------->TOE2(3)        <----------DOF2             *TSS         <---------ANAC58      --------->ATERF1(1)------>ZmHOX2a(1) ==================bZIP_DOF        ------->TEIL  <---------ANAC58 --------->ANAC46       --------->TOE1(3)   ctatatcgttctttgaggcatttcgtcgaacaccatgtatgcaattggaaggggtgtggttttggtcgacgtagcccgccatgatttctctccttaaagc  14497800                                  <---------ARR14(2)                           <---------ARR14(2)                           --------->ARR14(2)                       <---------MYB52(1)                     <---------TGA1a                     --------->O2 --------->ARR14(2)                     --------->TGA1a      <---------HSFB2a(1) <---------At4g35610      --------->HSFB2a(1) --------->At4g35610      <---------HSFC1(2) <---------DEAR3(2)                                                       <--      --------->HSFC1(2) --------->MYB52(2)                                                   <------     ----------->ARR10<-----------TGA1                                   <----------DOF2      <------     <-----------ARR10<-----------HVH21                      ----------->GT1                  <------ ==============================bZIP_DOF          ------>ZmHOX2a(1)<---------ARR14(2) --------->ANAC46 ->DOF2           ------>ZmHOX2a(1)   --------->LBD16        ------>ZmHOX2a(1)      <---------LBD16   tcgcgagaagcttctctctcctctcgtcagttccactatccgaagactctcctctagcctctcctgtaaatctgtctttctctattcccgcttctgcttt  14497900                                                    <---------AtMYB61          <-------TEIL                                                  <---------ANAC58            --------->ARR14(1)                                             <---------ICU4                   --------->CCA1(2)                                             <--------ATHB1                  --------->ARR11(1)                                             --------->ATHB51                --------->ARR14(2)                                             --------->YAB1      --------->ARR14(2)                                            <---------AHL20(2)   <---------ARR14(2)                                      ----------->GT1<---------MYB46(3)      <---------ARR14(2)                                    <---------At4g35610          <---------GLK1(2)      --------->ICU4     --------->ZAT6     <---------ATHB51   ----------->ARR10       --------->GLK1(2) ---------RAV1(1)      ------->TEIL --------->ZAT2<---------ANAC58    <---------ANAC46--------->ARR14(2) ---------AGL15       <---------CCA1(2)--------->At5g28300   <---------At4g35610      <---------GLK1(2) ---DAG2    --------->At4g35610     --------->At4g35610<---------ANAC46    ----------->ARR10 ----DOF2   <---------At4g35610     <---------ZAT2<---------ANAC46--------->GLK1(2)   <---------ARR14(2)   atgtgggcatgtttagctgaatttgtatctctactctaagctgtgaataattgtgtggtttggagcagattctcgtgaagattcgagggattctgaagtc  14498000                       --------->ANAC58                       --------->ANAC58                       --------->ANAC46                  <---------SPL7                 <---------ANAC58                 <---------ANAC58                 <---------ETT(2)            <---------ZAT14                                          <----------DOF2            --------->At4g35610                                     <---------ANAC46            <---------At4g35610    --------->ATHB12                 <---------ANAC58              <--            --------->ZAT14       <---------YAB1    <-------TEIL    <---------ANAC58             ----     --------->ANAC46<---------ALFIN1<---------WOX13(1)     ----------->HVH21                  ------   ttaatacacccgagtgctgtcgtccacccaaatgctgtgattggcaaggtttgattcatttactgacattgctttgaggtctctgagttgttttaagaac  14498100       <------MYB83       ----------->GT1  <---------YAB1     --------->ZAT14          <---------At4g35610 --------DOF2        <---------ZAT14          --------->At4g35610 ----->TOE2(3)      <----------DOF2 ------->TEIL                    --------->At4g35610 ->TEIL<------MYB46(1)             <-----------GT1       --------->ZAT6   --------->ZAT6   ctttatatttggtgaatttggactttactcagaaattgaacccttctctgctcatttgaagactagaaacagcttaacacttgcaattttcaaattagta  14498200  Previous    Next  AGI:  At4g29530.1    Description:  2,3-diketo-5-methylthio-1-phosphopentane phosphatase family. similar to phosphoric monoester hydrolase [Arabidopsis thaliana] (TAIR:AT1G17710.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65384.1); contains InterPro domain HAD-superfamily hydrolase, subfamily IB, hypothetical 1 (InterPro:IPR006384); contains InterPro domain HAD-superfamily hydrolase, subfamily IB, PSPase-like; (InterPro:IPR006383); contains InterPro domain Pyridoxal phosphate phosphatase, PHOSPHO2 (InterPro:IPR016965) Range:  from: 14496085    to: 14497460    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g29540.1    Description:  bacterial transferase hexapeptide repeat-containing protein. similar to bacterial transferase hexapeptide repeat-containing protein [Arabidopsis thaliana] (TAIR:AT4G05210.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65378.1); contains InterPro domain Bacterial transferase hexapeptide repeat; (InterPro:IPR001451); contains InterPro domain Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; (InterPro:IPR010137); contains InterPro domain Trimeric LpxA-like; (InterPro:IPR011004) Range:  from: 14497736    to: 14499802    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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