Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      --------->AHL20(2)                                                                    <---------AHL20(2)                                                            ------>ZmHOX2a(2)                                                           --------->CCA1(2)                                                           <------ZmHOX2a(2)                                                          --------->AGP1                                                          --------->ARR11(3)      --------------------->WRI1                          <---------ARR11(3)      <----------DOF2                        ------>ZmHOX2a(2)     --------->AHL20(2)    ------>ZmHOX2a(1)                      <---------ARR11(3) -------->P -------At4g35610                          --------->ARR11(3)<-----------GT1 ------>At4g35610                         --------->YAB1  --------->ARR14(2)   --------->ANAC58 ------>ZAT2                             <---------ATHB12 <---------ARR14(2)   --------->ANAC46  <--- ---->YAB1--------------->AGL15     --------->TOE2(3)    --------->GLK1(1)     --------->ANAC58  ---- ----ATHB12                         --------->YAB1     --------->LBD16 <-----------GT1       <------- ->WOX13(1)                    <---------At4g35610     --------->HSFB2a(2) --------->ANAC46  --------   agcttcctctttcttcaaattgcagacattttcagcaatctcaatgatctcatactccgagatctaccatttatttcccaccagcaaattcagtaagcag  14495400                                                                          <---------ANAC58                                                                     <---------MYB46(3)                                                                 ------>ZmHOX2a(2)                                                                 =======================HOX2a_HOX2a                                                                <------ZmHOX2a(2)                                                               <---------ARR14(2)                                                               --------->ARR14(2)                                                               --------->AGP1                                                               <---------ARR11(3)               <----                                                               --------->ARR11(3)              ------                                                              --------->GLK1(1)         <---------ZAT2                                      --------->AHL20(2)      <---------GLK1(1)         --------->STY1(2)         <---------ATHB12           --------->TOE2(3)        ----------->ARR10   ------>ZmHOX2a(1) ------ARR14(2)        <------ZmHOX2a(2)           <----------DOF2<-----------RAV1(1)   <---------STY1(2) ----->ARR14(2)       --------->ARR11(3)          <---------DAG2========================HOX2a_HOX2a-- --At4g35610          <---------ARR11(3)          --------->TOE2(3)  <-----------RAV1(1)--------->ZAT2 ->At4g35610      ---------->DOF2 <-------TEIL   ----------------->AGL1   <---------ANAC58   <-------   aaacacatcaaatcaaactagaaagatcactaaaaatacattaaaaactcaacctttttgggagagatctgttgttgcttctccttcactagctggtgta  14495500                                          --------->HSFB2a(1)                                     <---------ANAC55(2)    <------NtERF2                                     --------->ANAC55(2)   <-----------HVH21                                     --------->ANAC55(1)   ------>NtERF2                                     --------->ANAC46     <---------DEAR3(1)                             <---------DAG2               --------->DEAR3(1)       --------->At4g35610                       ----------->HVH21  <---------HSFB2a(1)                      <------NtERF2      <---------ARR11(3)     <----------DOF2   ------>ZmHOX2a(1)    <---------HSFB2a(1)     <--------      --------->ARR11(3) <<<<<<<GRF7 --------->ANAC58    <------NtERF2             <---------At4g35610 -----ARR14(2)       ----------->RAV1(2) <---------KAN4(2)<---------ANAC46      <------NtERF2 ----->HVH21   --------->ANAC58      --------->ANAC58  <---------DEAR3(1)     --------->ANAC46 ----->GAMYB   --------->ANAC46     <---------LBD16   <---------LBD16        <---------LBD16--------- --REM1(1)     --------->ANAC58--------->AHL20(2) <----------DOF2   --------->HSFB2a(1)     ---------   accgagaagatagtttctcgcaaacctgacactttatatacggaacatcctcctttctcggcgtcgaagaaggtttcttcgcggcatcggaaacaggtaa  14495600          --------->ZAT2     <------NtERF2     <---------------------WRI1                                                  <----------DOF2    ------>NtERF2                   <---------HSFB2a(2)                        <---------HSFC1(2)   --------->DEAR3(1)               --------->HSFB2a(2)                --------->At4g35610  --------->RAP2.3(1)             -------->P    --------->YAB1      --------->At4g35610 -ANAC55(2)   <---------At4g35610 --------->MYB52(1)     --------->ATHB12      --------->HSFC1(2) -->GT1  ------->TEIL  <---------TOE2(3)       <-------TEIL         <---------At4g35610 >ANAC55(2)   <---------ZAT2   --------->At4g35610      --------->MYB46(3)    --------->GLK1(2) <----   taacgccgacgaagctagcagagctaatgtaagagctaccagaactcgattcatcacaaccattgaagtcagaagcagagaagctttctctatctctctt  14495700                                <-----------HVH21                               <----------DOF2                                               <-------                         <---------AHL20(2)                                                  <-------                        --------->AHL20(2)            <------ZmHOX2a(2)                      <-------       --------->DAG2   <---------AHL20(1)           --------->ARR11(3)                      <-------      ---------->DOF2   <---------AHL20(2)           <---------ARR11(3)   <---------LBD16    <-------   ----------->GT1   --------->YAB1 --------->ANAC55(2)              <---------GLK1(1)  ------>ZmHOX2a(1) -----------AGL15 <----------DOF2  <---------LBD16 *TSS         ---------->DOF2       ------>ZmHOX2a(2)   aaatatggtaaagtttgggactttaataaaattctttcacgggttctatatagaagatcatgggtttaaagaattctctgggttttgatcctgtgccgtg  14495800                                             --------->YAB1                                             --------->TOE2(3)                                        ------------>CBF                                       ------>ZmHOX2a(1)                                     <---------ANAC46                            <---------ZAT18                              <---------ANAC58                                   --------->ZAT18                              <---------ANAC55(1)                               --------->TCP16(2)                              --------->ANAC55(2)                              <---------PCF5    <---------ANAC46          <---------ANAC58                        --------->ANAC58    <---------bZIP60(2)       <---------ANAC46                 --------->At4g35610       --------->HSFB2a(2) --bZIP60(2)                 <---------TOE1(3)         <-------GAMYB  --------->ANAC58   <---------HSFB2a(2) --ANAC58                    <---------TOE2(3)<---------YAB1   <---------At4g35610   <----------DOF2 --ANAC46                   <---------DOF5.7(2) <------------CBF ----------->HVH21<---------ALFIN1 --ANAC55(1)        <---------YAB1   <---------ANAC58 --------->MYB55(2)       <---------TCP16(1) --ANAC58         <-----------GT1    <---------ANAC58 <---------MYB46(3) ------->TEIL<---------DAG2   ttcatgaagtggaatcgatgttacgcttgttaacgtgtttcctgcaatcttattggctgttggaatgctgacacgaacttgggtccactttctcgaccat  14495900                                                    --------->ZAT14                                                    --------->At4g35610                                                  --------->ANAC46                                              <-----------ARR10                                          <---------LBD16                 ---------->ID1       <---------ATHB51                                <---------ICU4        <---------At5g28300           <---------AHL20(2)      <----------ID1      --------->AHL20(2)       <-----------GT1           --------->At5g28300<---------ZAT14      ---------->DOF2      <---------YAB1            ----------->GT1<------ZmHOX2a(2)   --------->ANAC58   <---------AHL20(2)    <---------ICU4           --------->ALFIN1 <-----------HVH21    --------->ANAC58   --------->AHL20(2)   gttagataattactgttttgtttttttgtatgtgtggtaaattattcggatcacagcacaaaatgggccaagcagtaaggcccattaattaatacgactg  14496000                                                                <------NtERF2                                                                --------->ATERF1(1)                                                               <-----------HVH21                <----                                                              <---------bZIP60(1)     --------->WRKY12                                                              <---------bZIP60(2)     <---------ETT(2)                                                              <---------DEAR3(1)      --------->ETT(2)                                                              <---------ANAC58        --------->DEAR3(1)                                                              --------->bZIP60(1)     --------->WRKY38(1)                                                              <---------O2           --------->ATERF1(1)                                                              <---------ANAC46       *TSS    <-------                    <------ZmHOX2a(1)     <------------CBF    <---------ANAC58       <------NtERF2              <---------AHL20(2)         --------->ATHB12  --------->ALFIN1        <---------ANAC46              --------->AHL20(2)        <---------YAB1 ---------->DOF2       <-----------RAV1(1)<----             --------->ICU4            <-----------HVH21--------->DAG2 <------------CBF    --------->WOX13(1)        ----------->GT1       ----------->GT1       <----------ID1  ------------>CBF------>NtERF2 ---   gatggctcaaatgtaattaataggatggagagtggtaaacttgtcattggcaagacgaaaagtggcgtcggacaattggatgttgccgtcgaccaattaa  14496100                                                 <---------ANAC46                                     --------->ZAT2                                     --------->GLK1(1)                        --------->LBD16      <-------GAMYB                        ------>NtERF2<---------GLK1(1)                    <---------ARR14(2)      <---------ANAC46                    --------->ARR14(2)    --------->LBD16                   --------->ZAT2    <---------At4g35610        ----------->GT1<---------DEAR3(1) ------>NtERF2                                  <---------AHL20(2)    <------ZmHOX2a(1) <---------LBD16--------->At4g35610                            <---------AHL20(2) -----YAB1         --------->At4g35610   <---------DEAR3(1)         ----------->GT1 <---------YAB1 --ATHB12  --------->ATHB12     --------->At4g35610     --------->ARR11(3)       <---------ARR11(3) -----TOE2(3)      <---------At4g35610  <---------LBD16 <---------ARR11(3)   ----------->GT1 ------->DOF2      <---------ZAT2    <---------ZAT2    <---------CCA1(2)     --------->YAB1        --   gaaagaggagaagtgatttgcagctccggcgagaagcagagctccggcgttgtgtttatatctcagaaaatggcaaaaatcgtgatattatttgatttcg  14496200                                                                      <---------At4g35610                                                                      <---------ZAT2                                                                      --------->ZAT2                                                                  <-----------HVH21                                                             ------>ZmHOX2a(2)                                                            <------ZmHOX2a(2)                                                           <---------ARR14(2)                                                           --------->ARR11(3)                                                           <---------ARR11(3)                                                           --------->ARR14(2)                                                           <---------ARR14(3)                                                           --------->AGP1            <---------LBD16     <---------ANAC58           --------->ARR14(3)          ------>ZmHOX2a(2)     <-------GAMYB             <---------GLK1(1)       <---------DAG2          --------->ETT(2)      <---------ANAC58          --------->GLK1(1)       <----------DOF2    <----------DOF2      <---------YAB1            ----------->HVH21  --------->At4g35610 ---->ZmHOX2a(2)    ----------->GT1<-----------HVH21     ----------->ARR10     <-----------GT1   atcggactttgatcgacggagatagtgacaattgggttgtcactgaaatgggactcacagagatcttccatcagctccgtttcactttaccatggaatcg  14496300  Previous    Next  AGI:  At4g29520.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO65389.1); contains InterPro domain Saposin B (InterPro:IPR008139) Range:  from: 14493917    to: 14495751    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g29530.1    Description:  2,3-diketo-5-methylthio-1-phosphopentane phosphatase family. similar to phosphoric monoester hydrolase [Arabidopsis thaliana] (TAIR:AT1G17710.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65384.1); contains InterPro domain HAD-superfamily hydrolase, subfamily IB, hypothetical 1 (InterPro:IPR006384); contains InterPro domain HAD-superfamily hydrolase, subfamily IB, PSPase-like; (InterPro:IPR006383); contains InterPro domain Pyridoxal phosphate phosphatase, PHOSPHO2 (InterPro:IPR016965) Range:  from: 14496085    to: 14497460    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version