Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              <------MYB83            <------MYB46(1)  ---------->DOF2 ------>GLK1(2)          <-------TEIL                                                           ----- ------GLK1(2)   ----------->GT1             <---------REM1(2)                      <---------ICU4 ---HVH21  --------->MYB59      <-----------GT1 ----------->GT1   --------->YAB1    --------->YAB1   aatcgaaagcgatttggtaatgtcaaattcatattcactacaacgtctacaagttaaaacactctcaagagtaatgtcatatacaataatctcattttgt  14491200                                                                --------->O2                                                                --------->ANAC46                                                          --------->KAN4(2)                    <-----                          <---------MYB52(1)             --------->HSFC1(2)                    <-----                         <-------GAMYB                   <---------KAN4(1)                   <-------                        <---------MYB46(3)               <---------HSFC1(2)              ----------->HVH21                    --------->MYB59                      <---------HSFB2a(1)            <-----------HVH21              ================================MADS_MADS  --------->KAN4(1)           --------->ZAT2              --------------->AGL15                      --------->HSFB2a(1)         <---------ZAT2              <---------------AGL15                     <---------KAN4(2)            <---------At4g35610              <----------DOF2                     ----------->TGA1              <------ZmHOX2a(2)             <-----------------AGL2      <------NtERF2  ------->TEIL          --------->GLK1(1)<----- ----->ID1--------->GLK1(1)   --------------->AGL15  <---------YAB1    <---------O2  --------->At4g35610   tgtatatgtgtgatttcttttttaggtcgttactgctaatggctgcaagaacatgacgaatgttccacgagagacatgggagatcgaagctgtgatggct  14491300               ------>MYB83               ------>MYB46(1)              --------->ORA47(1)             --------->DEAR3(1)             --------->DREB2C(2)             --------->DEAR4(1)             ------->GAMYB             <---------MYB111(2)             <---------MYB46(2)             <---------MYB55(2)             <---------MYB111(1)             ----------->HVH21             --------->MYB46(3)                        --------->AHL20(2)            <------NtERF2                              <---------AHL20(2)                     <------    <---------ANAC58         <---------At4g35610<---------HSFB2a(2)              <--------ATHB1    <---------ANAC58        <---------TOE1(2)   --------->HSFB2a(2)              --------->YAB1 ----ANAC58 --------->MYB46(3)             <------NtERF2                        <---------ATHB51 ----ANAC58 --------->DEAR3(2)             <---------ZAT2                       <---------ATHB12 --MYB46(3)<---------ATERF1(1)             <---------At4g35610      <---------ANAC55(2)   <----------DOF2 ----ANAC46------>NtERF2 ------>ZmHOX2a(2) --------->At4g35610      ----------->GT1      --------->TOE2(3)   ggagggccttggccaccgaccaagtgatcgtagctactcttaggcagcttatggaaattaaaaacttgataagtaaaactcaataatacaacctttattt  14491400                                                                                     <------MYB46(1)                                                                                     <------MYB83                                                                                   <--------P                                                                                  <-------GAMYB                                                                                 --------->MYB55(2)                                                                                 <---------MYB46(3)                                                                                <---------AtMYB61                       <---------ANAC58                                       <-----------RAV1(1)                       <---------ANAC58                                       <---------ANAC46                       <---------ANAC46                                       <---------ANAC58              <------ZmHOX2a(1)                                       <---------ANAC58             ----------->GT1                                          <---------ANAC58             <----------ID1                          <---------AHL20(2)       <---------ANAC58 ---YAB1    <---------TOE2(3)   <-----------GT1   ----------->GT1     <---------ANAC46       <-------   ttgttaatgggaataaggaaaaattgcctgtgttttactaatcttgtacatgtagtttattttgtttcagtgtcttgtttgtgtggttggatattaaacc  14491500                                         <---------ANAC58                                     <------MYB83                                     <---------ANAC58                                     <------MYB46(1)                                     <---------ANAC58                                    <---------AtMYB61                                    --------->MYB46(2)                                    --------->MYB55(2)                                    --------->MYB111(2)                   <---------ARR11(3)                                    <---------MYB46(3)                    --------->ARR11(3)                                    --------->MYB52(2)             ----------->GT1                        <-----------ARR10<---------ANAC58 <---------ARR14(2)                        <---------ARR11(3)                ------>MYB83    --------->AHL20(1)                        --------->ARR11(3)                --------->ARR14(2)                     --------->AHL20(2) <---------MYB46(3)--------->MYB52(1)                  ----------->GT1   --------->MYB111(1)   ------>MYB46(1)--------->CCA1(1)                 ----------->GT1  <---------MYB52(1)    <---------MYB59  --------->RVE1(1)             <---------ZAT14<-----------GT1   --------->ETT(2)   <-------TEIL ----GT1     --------->ZAT18--------->MYB52(1)<---------ETT(2)   --------->ZAT14   ------------>CBF   gattgaatgttcaagtggacagataaaatctaaccggtttggtgcttgtcgacgaaaaccgaaccggtacagaaaatatcttgagcacaattttagttct  14491600                                                 <---------ANAC58                                                 <---------ANAC58                                                 <---------ANAC46                                                <-------TEIL                                             --------->HSFC1(2)         --------->TOE2(3)                   <---------HSFC1(2)       <-------TEIL                       ---------->DOF2   <---------AHL20(2)          *TSS     --------->AHL20(2)       --------->TOE1(3)          ---------  --------->AHL20(2)----------->GT1     <---------AHL20(2)       --------->TOE2(3) ---------->ID1   aatataaaattcattaacaagagagaaaaaaaaaacttcaaattaaaagcttcgtgtcttcataaaaccctaatctcgcgacttcgtctctatccccaaa  14491700                                                                                               ------                                                                                            ------>MYB83                     <---------ANAC46                                              <----------DOF2                     <---------ANAC58                                      <-------TEIL     ------>MYB46(1)  <----------DOF2    <---------ANAC58                        --------->ANAC46    --------->At4g35610 >LBD16------>ZmHOX2a(1)             ---------->DOF2      --------->MYB46(3)  <---------At4g35610   aaccctttcctctcttccttcttgtgtgagaccgagaaaaaaagatgactaagaacagtaaccacgacgagaatgagttcatcagctttgaaccaaatca  14491800                                                                      <---------HSFC1(2)                                                                      <---------HSFB2a(1)                                                                      --------->HSFB2a(1)                                                                    <---------ARR14(2)                                                                    --------->ARR14(2)                                                                   <------ZmHOX2a(1)                                                               <---------ANAC46                                                              --------->ATERF1(1)             <----------DOF2                                  <------NtERF2          --------->ANAC58                                   ------>NtERF2          --------->ANAC58                                   --------->LBD16                        -        --------->CCA1(2)                                   <---------ATERF1(2)                    --        --------->ARR14(1)                                  --------->ATERF1(2)                    <-       --------->ARR11(1)                                   <---------DEAR3(1)                    <--       --------->ARR11(3)                                  <---------ANAC58                       <--       --------->ARR14(2)                                  --------->ATERF1(1)                    ---       <---------ARR14(2)                                  <---------ANAC58                      ----       <---------ARR11(3)                             --------->ALFIN1--------->HSFC1(2)        -----     ----------->ARR10                                <-----------RAV1(1)                       -----  --------->ANAC46  --------->ARR11(3)                <---------REM1(1)                         <---- --->YAB1<-------TEIL                   --------->At4g35610<---------LBD16 --------->LBD16   --------   gaacacgaagatacgctttgaagatgctgatgaagacgaagttgctgaagggtctggtgttgccggcgaggaaactccccaagatgagtccatgttcgac  14491900            <-----------HVH21            <---------ATERF1(1)            <---------DDF1           <---------ETT(1)           --------->DREB2C(2)           ----------->HVH21           --------->RAP2.3(3)           --------->RAP2.3(2)           --------->DEAR3(1)           --------->RRTF1(2)           --------->RRTF1(3)           --------->At1g77200          <------NtERF2          --------->RRTF1(1)          --------->ERF1         <---------ATERF1(1)       <---------ABI4(2)       --------->ZAT18 <------NtERF2 -------->LBD16 ------->DEAR3(1) --------ANAC46   <---------At4g35610 -------LBD16     --------->At4g35610 ----NtERF2--------->DEAR4(1) ------>ATERF1(1)--------->DEAR3(1) -->NtERF2--------->RAP2.3(1)                                                            <----------DOF2 ---->DEAR3(1) ------>NtERF2                                                             <---------DAG2 ---->ANAC46------>NtERF2 --------->MYB52(1)                                      <----------TaMYB80 -----DEAR3(1)<---------ALFIN1                                             <----------DOF2         <- --->HVH21--------->ORA47(2)    <---------YAB1               <---------GLK1(2)----------->GT1<-------   gccggagagagcgccgacaccgctgaagtaactgatgataccaccagtgccgattactacttcgattcttactctcactttggtaaattcccttttttca  14492000                     <----------DOF2                   <----------DOF2                            <---------DAG2            <---------ANAC58                                  <----------DOF2            <---------ANAC58                               <---------ALFIN1      <---------AHL20(2)                              <------MYB83         --------->GLK1(1) --------ARR11(3)<---------ZAT18                      <------MYB46(1)     <------ZmHOX2a(1)         - ----GT1 <-----------GT1     <---------YAB1          --------->MYB59   <---------AtLEC2          <---   agttctatttttttccttgtgctctttggttatgaattcttactaagagttgaatttggttccacttttttttgcaggaatccatgaagtaagtatcgag  14492100  Previous    Next  AGI:  At4g29490.1    Description:  X-Pro dipeptidase. similar to metallopeptidase M24 family protein [Arabidopsis thaliana] (TAIR:AT1G09300.1); similar to metallopeptidase M24 family protein [Arabidopsis thaliana] (TAIR:AT1G09300.2); similar to hypothetical protein OsJ_005775 [Oryza sativa (japonica cultivar-group)] (GB:EAZ22292.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65391.1); similar to unknown [Picea sitchensis] (GB:ABK24230.1); contains InterPro domain Peptidase M24, catalytic core; (InterPro:IPR000994); contains InterPro domain Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal; (InterPro:IPR007865) Range:  from: 14487900    to: 14491531    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g29510.1    Description:  ATPRMT11/PRMT11 (ARABIDOPSIS ARGININE METHYLTRANSFERASE 11); protein-arginine N-methyltransferase. Identical to Probable protein arginine N-methyltransferase 1.1 (PRMT1.1) [Arabidopsis Thaliana] (GB:Q9SU94;GB:O81813;GB:Q8VZP0); similar to protein arginine N-methyltransferase, putative [Arabidopsis thaliana] (TAIR:AT2G19670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65390.1); similar to Os09g0359800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062975.1); contains InterPro domain Methyltransferase type 12 (InterPro:IPR013217) Range:  from: 14491631    to: 14494007    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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