Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        --------->YAB1                   --------->WOX13(1)                  --------->AHL20(2)                 --------->AHL20(2)        <---------AHL20(2)       --------->AHL20(2)    --------->YAB1<---------AHL20(2) -->GLK1(2)  <---------AHL20(2)             ----------->GT1    <---------At4g35610               <--- --GLK1(2)   --------->AHL20(2)     --------->YAB1 <-----------GT1                         --------->ANAC46   tttgaatcataaaatttaaattaatcaaattttgacattgaaaattttgtaaatttccctactacagcaaacaagagacgtttcagtgaattcacacaaa  14487400                                                                                             <-------                                                                                          --------->YAB1                                                                                         <---------ATHB12                                                                                   --------->ANAC58                                                                                   --------->AtLEC2         <-----------------------TaNAC69(2)     <---------YAB1                     --------->ANAC58     ---------->DOF2                ------>ZmHOX2a(1)                           <---------ATHB12  --------->TOE1(3)             <---------ARR14(2)                <---------ZAT14 --------->WOX13(1)  --------->TOE2(3)    ---------->DOF2        --------->MYB52(1)  --------->ZAT14---------->DOF2 ------ATHB12  ---------->DOF2  --------->ARR14(2)          --------->MYB46(3)--------->WOX13(1)<----   tcaagcttaaagacttaaaaagcctaaaaccccaaatcctatattccataacgatagatcgaacaaactacagtgtgaatcaatcaagcaaatcaaaatt  14487500                                                              ------>ZmHOX2a(2)                                                             <------ZmHOX2a(2)                                                            <---------ARR11(3)                <<<<<<<ZML2                                 --------->AGP1             --------->HSFC1(1)                             --------->ARR11(3)             ------>ZmHOX2a(1)                 <---------ARR11(3)             <---------HSFB2a(2)    --------->ANAC58        <---------AGP1     <-----------HVH21              --------->ANAC58   --------->CCA1(2)    --------->WOX13(1)       --------->DOF5.7(2)<------ZmHOX2a(2)  <---------ATHB12        <---------ATHB12     --------->ARR11(3)---------->DOF2          <---------ARR14(2) --ICU4      --------->HSFB2a(2)<---------HSFB2a(2)   --------->ARR11(3)      ---------->DOF2 -------GT1  <---------HSFC1(1)<---------DOF5.7(2)    <---------ARR14(2)   --------->TOE2(3)   acaaatcagtcactcctagaacgaacaaatcgttatcgaagcaagaagagatcacagatatagatctaaaagtcaaaccacaaagcatagcatatacaag  14487600                                                                 ------>MYB46(1)                                                                 ------>MYB83                                                               <---------MYB59                                                              --------->HSFB2a(1)                                                              --------->HSFC1(2)                                                              <---------HSFC1(2)                                                              <---------HSFB2a(1)               -----                                                             ------->TEIL                       -----                                                             --------->SPL7                     <----                                        <---------WRKY12   <---------SPL7                       <----                     --------------->AGL15                --------->DEAR3(1)           <---------ALFIN1                     <---------MYB59  <-----------HVH21  --------------->AtSPL3       --------->ZAT2                    ----------------->AGL1               --------------->AtSPL8       <---------At4g35610                    ----------------->AGL2             --------->ANAC46      --------->YAB1 <--------          ---------->DOF2       <---------HSFC1(2)<---------ARR14(2)        <---------YAB1  <--------     <------ZmHOX2a(1)          --------->HSFC1(2)--------->ARR14(2) <---------ZAT14  --------->At4g35610  <-----------RAV1(2)<---------------AGL15        <---------GLK1(2) ------>ZmHOX2a(1) <---------ZAT2   agaagcaggagcaaaagcctcgacccaattgagaaacatcggtcagagaccagaaactcgccgtaccttcctgcagttttgataatgcagcaccggtgag  14487700   --------->CCA1(2)                                                                       <---------ANAC58 ---->ZAT2                                      --------->ANAC55(2)                *TSS    <---------ANAC58 ---->At4g35610             <---------ALFIN1    <---------ANAC46                  ----------->GT1 -----At4g35610          --------->ANAC46       <---------ANAC55(2)              <------NtERF2 -----ZAT2             <---------ANAC58       ------->GAMYB                     ------>NtERF2   <---- -MYB52(1)             <---------ANAC58   --------->MYB46(3)        <---------YAB1<---------ANAC46<-- ---HVH21           <---------GLK1(1)  --------->MYB46(3)       <----------DOF2<---------DEAR3(1)----   ctgagagatgagtcgattcgagatttcgggccactggttcaacaacaactgcgtaatacttctcttctttatgttagaacgacggcgtaatatgcgtttc  14487800                                            <---------ARR11(3)                                            --------->ARR11(3)                                           <---------CCA1(2)                                       <---------ANAC46             --------->YAB1                  *TSS           <---------ANAC58         --------->O2                   ----------->TBP                  < -----YAB1 <---------ANAC58         <---------O2                 <---------HSFB2a(2)          ------- ----------CBF   <----------DOF2    --------->bZIP60(1)          --------->HSFB2a(2)    <---------GLK1(1) ----->ATHB12<---------MYB52(1)     <---------bZIP60(1)  ------>ZmHOX2a(1)      <----------DOF2 <----   gattggaacgatgtcgtttctttcacactcttagaacgacgtcgtatatattcgttttcctcgagttctataaaaacgacagcgttttggatatttggct  14487900                                                                                               <-----                                                                                             --------                                                                                             <-------                                                                                            ---------                                                                                           <---------MYB52(1)                                                                                          --------->LBD16                                                                                          <---------DEAR3(2)                <------NtERF2                                   <---------ALFIN1       ------>NtERF2               --------->LBD16                                 --------->MYB46(3)     --------->ANAC58              --------->LBD16                    <---------ANAC58                     --------->ANAC58         <---------ANAC58                        <---------ANAC58                     --------->ANAC46 ---------YAB1--------->ETT(1)            <-----------TGA1    ------>ZmHOX2a(1)     <---------ALFIN1 --->ID1 <---------ANAC58                 <-----------HVH21  --------->ANAC46   --------->GLK1(1) ------DOF2  <---------LBD16        ----------------------->TaNAC69(2)          <---------GLK1(1)----   ttattattaggccttgccggaaaaacaaaaaactagctcatcgtcgtcatgtcgtctctgtctcctccaccgattccaatggaactccacgccggtaacc  14488000                           --------->MYB52(2)                         <------NtERF2                         <---------MYB52(1)                        <---------RAP2.6(3)                        <-----------HVH21   ----------->GT1      ------>NtERF2  --------->DAG2       --------->DEAR3(1) ---------->DOF2       --------->RAP2.3(3) ----LBD16          --------->ANAC58 ->ARR14(2)         --------->ANAC46                                                              --- --ARR14(2)         --------->ANAC58                                                              --- -->HVH21--------->HSFB2a(2)<-------GAMYB  <---------ATHB12                                      <--- ----->LBD16   <---------ICU4<---------MYB52(1)                ---------->ID1     --------->ATHB12---   ggaaaaagttactagaatcaatacgccgtcagttatctagttccaatcgttctctcgatggatttgttcttctacaggtacccttgattagctcttatat  14488100                                                                                            ---------                        ------>ZmHOX2a(2)                                                <---------ANAC58            --------->ANAC55(1)     --------->ZAT18                                      <---------ANAC46            --------->ANAC58      <---------ZAT2                                         <---------ANAC58            --------->ANAC58      --------->ZAT2                                      <---------DEAR3(1)            --------->ANAC55(2)<---------ANAC58                                       --------->ALFIN1            --------->ANAC46--------->ARR14(2)                                  <---------ARR14(2) <---------ICU4       --------->ARR14(2)  <---------YAB1                  <---------HSFB2a(2) ------- ------>YAB1<---------ANAC55(2)<---------ANAC58                       <---------GLK1(2) <------NtERF2 ------>ANAC55(2)     <---------ARR14(2)<----------DOF2           <---------ANAC58  <---------ANAC58 ----TEIL <---------ALFIN1  --------->GLK1(2)            ----------->GT1  --------->HSFB2a(2)<------ZmHOX2a(1) ------>ANAC46 ------->TEIL <---------ARR14(2)  <---------ANAC46  <---------ANAC58  <---------ANAC58   acataatttccaacacgtatcgatgatccgattccgagctcgctttcattgtgtttagtttgtaattttcttgattctggacgatagggtggcgaggaga  14488200                      --------->DEAR3(1)                     --------->ANAC46                                                          ------             --------->ICU4           --------->ICU4                                        <--------         --------->ZAT14       <-----------RAV1(2)<---------AHL20(2)                        <-------- -->GT1  --------->ZAT18  <---------ARR11(3)     --------->AHL20(2)       --------->WOX13(1)<-------- ---->GT1<---------ZAT14 <---------ZAT2--------->ATHB12               <----------DOF2      --------->ATHB12   aaaatcgatactgtactgatcacaccgagctcttcaggtattgatttgaaattttatctcgaggtttcttctctttcaatctgttcaatgtattgagtgg  14488300  Previous    Next  AGI:  At4g29480.1    Description:  mitochondrial ATP synthase g subunit family protein. similar to mitochondrial ATP synthase g subunit family protein [Arabidopsis thaliana] (TAIR:AT2G19680.1); similar to mitochondrial ATP synthase g subunit family protein [Arabidopsis thaliana] (TAIR:AT2G19680.2); similar to unknown [Solanum tuberosum] (GB:ABA40451.1); contains InterPro domain ATPase, F0 complex, subunit G, mitochondrial; (InterPro:IPR006808) Range:  from: 14486047    to: 14487783    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g29490.1    Description:  X-Pro dipeptidase. similar to metallopeptidase M24 family protein [Arabidopsis thaliana] (TAIR:AT1G09300.1); similar to metallopeptidase M24 family protein [Arabidopsis thaliana] (TAIR:AT1G09300.2); similar to hypothetical protein OsJ_005775 [Oryza sativa (japonica cultivar-group)] (GB:EAZ22292.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65391.1); similar to unknown [Picea sitchensis] (GB:ABK24230.1); contains InterPro domain Peptidase M24, catalytic core; (InterPro:IPR000994); contains InterPro domain Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal; (InterPro:IPR007865) Range:  from: 14487900    to: 14491531    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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