Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   -------->ZAT6                      <---------ICU4                              --------->ANAC55(1) -MYB83                      --------->ARR14(2)                                 --------->ANAC58 -MYB46(1)                   --------->GLK1(2)                          <---------ANAC58 -->MYB111(2)           ----------->GT1                       --------->ARR11(1)--------->ANAC55(2) ---AtMYB61            --------->ALFIN1                       --------->ARR14(2)<---------ANAC55(2) ---MYB46(3)         <---------ANAC58                   <---------AHL20(2)      --------->ANAC58 -->MYB46(2)         <---------ANAC46         <---------MYB52(1)   <---------ANAC58 -->MYB111(1)        <---------ANAC58        <-------GAMYB    <---------GLK1(2) --------->ANAC46<---- -P            --------->ZAT18     <---------ATHB12  ----------->GT1    <---------ANAC58        <---- --MYB55(1)--------->MYB52(1)<---------ARR14(2)     ----------->GT1<---------ANAC58             <----   tatcactatcgaataagggcattgtgtggagaatccaatcttttctccgttagagtgtttaatagatttgcttagcttgtttacgcaacgtttgaactgc  14483500                      <---------MYB59           --------->TOE2(3)         <---------TOE2(3)         <---------TOE1(3)                                                               <---------DAG2        --------->MYB52(1)                                                               ------------        <---------DOF5.7(2)                                                       <------MYB46(1)      --------->DOF5.7(2)  --------->YAB1                                         <------MYB83     --------->At4g35610------>MYB83                                            <---------WOX13(1)     <-------GAMYB    <---------MYB111(1)                                     <---------MYB46(3)     <---------At4g35610------>MYB46(1)                                       --------->ATHB12 -----ANAC58         --------->ANAC55(2) <-----------GT1               <-----------RAV1(1)<----------DOF2 -----ANAC58  --------->ANAC58     ------>MYB46(1)                 <---------GLK1(2)  <-----------GT1 -----ANAC46  --------->ANAC58     ------>MYB83             --------->AtLEC2 <---------YAB1  --------   ttgtggcagttaacgtaagtcatacctaataaaaaccaaatattaactcaagaatggttttcatgcatagattatgttgttgattggtttaccttttaaa  14483600                                                                      <-----------GT1                                    =============================HOX2a_HOX2a                                    <------ZmHOX2a(2)       --------->GLK1(1)                                   --------->ARR11(3)     <------ZmHOX2a(1)                                   <---------ARR11(3)    --------->ANAC46                            --------->YAB1              --------->LBD16    ------>MYB46(1)       --------->YAB1     --------->ANAC58             --------->HSFB2a(2) ------>MYB83 --->AGL15  <---------YAB1--------->ANAC46       <------NtERF2--------->AtLEC2                     -- ->AHL20(2) --------->ICU4--------->ANAC58     --------->ALFIN1  ---------->DOF2                   <-   tcaacacaattgtcatgagtcatacaacaagcatcaagatcatcacaaggtggctctccaggacatccaaagtaacctatcccacaatacttcccatagc  14483700       <---------ARR11(3)                <<<<<<<<<<ABI3                                          ---- ------->ARR14(2)          <------ZmHOX2a(2)--------->AtLEC2                                <-------- --------ARR14(2)   --------->ATHB12     <<<<<<<<<<FUS3              ---------->DOF2      --------->YAB1   gaataccaagacctgaaaacaaagattggatcaaaacatataatgcatgcacaagtttttttctccaaaatcaaaggaaggcataagaactaagatgata  14483800                                               <---------ALFIN1                                              --------->ZAT18                                       <-----------RAV1(1)                                       <---------REM1(1)                       <------ZmHOX2a(1)                                     <---------At4g35610                     --------->ALFIN1       <                                   ================RAV                  <---------ANAC46            -                             <---------ZAT14  <---------ZAT14          <------NtERF2     --------->At5g28300                             --------->ZAT14  --------->ZAT14         ------>NtERF2      ============                          <---------ANAC46    <---------ZAT18<---------At4g35610         <-------GAMYB                        <---------ZAT14===========================RAV<---------DEAR3(1) <---------MYB46(3)               <-----------RAV1(1) <-----------RAV1(2)       --------->At4g35610        ----------->GT1          --------->YAB1--------->ZAT14--------->ALFIN1 ------>ZmHOX2a(1)   <------ZmHOX2a(1)     ===         <<<<<<<<<ARR2 --------->ARR14(2)  --------->At4g35610    --------->MYB46(3)   <---------DEAR3(1) ------->GT1   ================================RAV    ----------->RAV1(2) --------->ALFIN1        --- -YAB1   <<<<<<<<<ARR1 <---------ARR14(2)  <---------At4g35610  --------->MYB52(1)<------ZmHOX2a(1) -   agaaaaaaacaatcttactgttgcagttctgtgcaatgcaggtgttgctgcacttctcctggctgctaacgacggcgaggaggaggaaggcggttaaacc  14483900               --------->ANAC58               --------->ANAC58         ----------->HVH21        <-------MYC2        ------->MYC2        ------->MYC3        <-------MYC3       <---------O2       --------->ANAC46       --------->ANAC58       --------->bZIP60(2)       --------->TGA1a       <---------TGA1a       --------->ANAC58       --------->ANAC55(1)       --------->O2       <---------ANAC55(2)       --------->ANAC55(2)       =================bZIP_DOF     <---------ALFIN1   ----------->RAV1(1) --------------OsCBT  <---------LBD16 -------->ANAC58   --------->ANAC58                                                               <-- ================MYC_MYB--------->LBD16                                               --------->GLK1(2) ================bZIP_DOF                                                            <---------GLK1(2) ------->DOF2---------->DOF2      --------------------->WRI1                   <----------DOF2    === -------->ANAC58   --------->ANAC58       *TSS  <----------DOF2         <---------ANAC46          <--   gaaagcaacacgtgacaaagcaagcccggtgatcatctttctaaatctcgctctctggttgaagtttttgggttttgtgttctttcaaattctgtcccaa  14484000                                         <------MYB83                                        --------->MYB59                                        <---------AtMYB61                                        <---------MYB46(3)                                        --------->MYB111(1)                                       <--------P                              <---------------AGL15                              --------------->AGL15                             <-----------------AGL3                             ----------------->AGL3                             <-----------------AGL2                          <---------ARR14(2)                          --------->ARR14(2)                          --------->KAN4(2)                          <---------ARR11(3)                          --------->ARR11(3)                         <---------KAN4(1)                                                       <---                         --------->HSFB2a(1)                                                     ----                         <---------HSFB2a(1)                                               --------->ANAC58                         <----------TaMYB80                                                --------->ANAC58                         --------->KAN4(1)                                             --------->ANAC58                         <---------GLK1(1)       ------>ZmHOX2a(1)                     --------->ANAC58               --------->HSFB2a(2)    <-------GAMYB    <---------ANAC58               <-------TEIL              <---------LBD16----------------->AGL2 <----------DOF2                <---------ANAC55(2)       ---------->ID1    --------->GLK1(1)     ----------->RAV1(2)                 <---------ANAC58 <---------YAB1<---------HSFB2a(2)   <---------MYB46(3)<---------ANAC58            <---------ANAC58 ---------------AGL2    ---------->TaMYB80    ------>ZmHOX2a(1)    <---------ALFIN1<---------ANAC46 ==============================================MADS_MADS      ------>ZmHOX2a(1)    --------->ANAC55(2) ---------------AGL3    <---------KAN4(2)<------MYB46(1)   ---------->ID1     <----------DOF2   -----   actatttttggctctctctggaatggaatatcccatttttggttggtcctcctgctttcttgtccttcccctctctctctcttttacgtacacaagaatt  14484100                                    --------->YAB1                                   <---------YAB1                            --------->YAB1                           <---------ATHB12               <---------HSFC1(1)                          ------>MYB83                    --------->HSFB2a(2)    --------->At5g28300                          ------>MYB46(1) <---------AHL20(2)                    ----------->GT1                         --------->WOX13(1)               <---------HSFB2a(2) <---------ORA47(1) ------AHL20(2)<---------ANAC58  <---------ICU4           --------->HSFC1(1)  <---------------------WRI1 ----->AHL20(2)<---------AtLEC2  --------->YAB1 ------->TEIL             --------->YAB1           <-- ---->AHL20(2) <---------ANAC58 <---------ATHB12--------------->AtSPL3  <---------YAB1         <-----   taaaaaatgaagaagttgcatgactaccaatcaaatcatcatattttatggacgttccttctcgaagaagcattatcatggacggtaaaaacagagtatc  14484200                                                      --------->ATHB12                                                      <---------ICU4                                                     <---------ATHB12                                                     --------->ICU4                                                     <---------YAB1                                              --------->MYB46(3)                                            --------->MYB52(1)                                         --------->ANAC58                                         --------->ANAC46     <-----------GT1                     --------->ANAC58 -------YAB1             <-------MYC3 --------->ARR14(2)                ----------->GT1 ----YAB1                ------->MYC3 <---------ARR14(2)    --------->TOE2(3)                    <---   atttttgttacctcttggaacagaacacgtttaagctatgtattcgcaacggctaatgattttcttaatgcaatctgttacaaatagattgcagattaat  14484300                         <---------ICU4                      --------->ATHB12              <---------YAB1                  <---------GLK1(2)             <---------ARR11(1)          ----------->RAV1(1)<---------AHL20(2)          <---------DAG2            <---------CCA1(2)            --------->MYB52(1) --------->AHL20(2)          <----------DOF2          <---------ANAC58         --------->ANAC58 <---------YAB1                --------->ARR14(2)          <---------ANAC58  <-----------GT1 ------->GAMYB  <---------WOX13(1)     <---------ARR14(2) ------AHL20(1)--------->ATHB12    --------->ANAC58<---------TOE2(3)     --------->AHL20(2)      <---   atgtttcgattttcgtatcattgctgatttttacatcaagaaacaacagaatttatgtttgatttattagaaaaaaaaaatccatatacactttttcttc  14484400  Previous    Next  AGI:  At4g29460.1    Description:  phospholipase A2 gamma, secretory low molecular weight. similar to phospholipase A2, putative [Arabidopsis thaliana] (TAIR:AT4G29470.1); similar to phospholipase A2 [Nicotiana tabacum] (GB:BAD90926.1); contains InterPro domain Phospholipase A2, eukaryotic; (InterPro:IPR001211); contains InterPro domain Phospholipase A2 (InterPro:IPR016090) Range:  from: 14482881    to: 14483942    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g29470.1    Description:  phospholipase A2, putative. similar to phospholipase A2 gamma, secretory low molecular weight [Arabidopsis thaliana] (TAIR:AT4G29460.1); similar to phospholipase A2 [Nicotiana tabacum] (GB:BAD90926.1); contains InterPro domain Phospholipase A2, eukaryotic; (InterPro:IPR001211); contains InterPro domain Phospholipase A2 (InterPro:IPR016090) Range:  from: 14484345    to: 14485823    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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