Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            --------->AtMYB61                                                                                 <---------MYB46(3)                                                                                <---------TOE1(2)                                                                              <----------DOF2                                                                            <------ZmHOX2a(2)                                                                           --------->ARR11(3)  ----------->GT1                                                          <---------ARR11(3) --------->LBD16                                                           <-----------ARR10 -----------RAV1(2)                               --------->ATHB51         <---------ARR11(1) ->MYB46(1)                                       --------->ATHB12         --------->ARR14(2) ->MYB83            <-----------GT1              <---------YAB1            <---------ARR14(2) ---MYB46(2) <---------ICU4       --------->TOE1(3)                       <---------CCA1(2)         - ---MYB59  --------->ARR11(3)     --------->TOE2(3)                    <---------LBD16<---------ETT(1) ---MYB111(1)--------->YAB1--------->AHL20(2)  <---------ICU4     <---------AHL20(2) --------->DEAR3(2) >SPL7   <---------AHL20(2)<---------AHL20(2) --------->ICU4   --------->YAB1------>ZmHOX2a(2)<------ -->AtSPL3 --------->GLK1(2)   <-----------GT1<---------YAB1--------->YAB1<---------ARR14(1)  <------   atccaggttaaataatcttgattttctgtttaattaccttaaaaacacattattattgaaactaataataaatctcggatctttggttccgaccatactt  14444400            <----------DOF2      --------->ATHB12      <---------ICU4     <---------YAB1     <------ZmHOX2a(2)    <---------ARR11(3)    --------->ARR11(3)<---------TOE2(3)                 <---------GLK1(2)    <---------ANAC58       < --------->DOF2   --------->YAB1             <---------ANAC58     <---------AtLEC2          <-------- ---ANAC58 <---------ANAC58                  <---------ANAC58 <----------DOF2<---------ANAC58   <---- ---ANAC58 <---------ANAC58          <---------YAB1   ----------->ARR10  <----------DOF2 <<<<<<<<<MYB98   gcgaaagatcattgctttaatgctaatgtttctctaattttgatattccttgagattagattccctttgcattgtcttttcttgttaatttgttagggtt  14444500                                                                           <-----------HVH21                                                                          <----------ID1              <---------AHL20(2)                                          ----------->GT1             --------------->AGL15                                  <---------YAB1             ======================================================================MADS_MADS            <---------YAB1                                       ----------------->AGL3     <-----------GT1                                             <-----------------AGL3 ---------GLK1(2)      ---------->DOF2                           ------>ZmHOX2a(2)             ------ -TOE1(3)  <---------AHL20(1)         --------->YAB1           <---------ARR11(3)          <--------- ---TEIL--------->TOE2(3)----------->GT1      <---------CCA1(2)--------->AGP1      ---------->DOF2   catattcttacattattttttttggcaaagaaaaaaacatttataaacatatctaattcgagcctgatctattaatgggtcaaataaaagcctctttggc  14444600                             --------->YAB1                            <---------YAB1                          --------->YAB1                         <------ZmHOX2a(2)                        <---------ARR11(3)                        --------->ARR11(3)                    --------->At4g35610                 ----------->RAV1(2)                      --------->ANAC58  --------->AHL20(2)<---------LBD16                       --------->ANAC58 ---->ID1        --------->ZAT2                      ----------->ARR10 -DOF2           <---------ZAT2                    <---------ZAT14---------->DOF2  ------>ZmHOX2a(2)   ccaattcaataaactggccaactggggatcatcatagagacagactactagagagtagagacgcatcagaaagaagagaaattgatcccacaagtttaaa  14444700                                                                                        >>>>>>>>>MYB98                      --------->ANAC58           <---------ANAC58                      --------->MYB52(1)                      <---------ANAC55(2)        <---------O2                        <---------MYB46(2)                      --------->ANAC55(2)        <---------ANAC46                    <---------MYB59                      --------->O2               <---------bZIP60(2)            <---------At4g35610                      --------->ANAC58           <---------TGA1a                --------->At4g35610                ------->MYC3                     --------->TGA1a                <---------ZAT2                ------->MYC2                     --------->O2   <---------WOX13(1) ------>NtERF2                <-------MYC2                  --------->ANAC46 <------------CBF <---------ATERF1(1)                <-------MYC3                --------->ZAT6    --------->ATHB12  --------->ZAT2               <---------ANAC58           <-----------GT1    <---------YAB1    ------->TEIL               <---------ANAC58    --------->At5g28300  --------->ANAC58    --------->ANAC58           <---------AHL20(2)     ----------->GT1<---------ANAC58           --------->ANAC46          --------->AHL20(2)     <---------DEAR3(1)     --------->ANAC58    --------->ANAC58        -   cacgattacaaattaaaacgtgccacgtattcaagacggtgaattaacacgacgtggcaaggtatgattggataacttacgcagctgcctaacaaaaaca  14444800                                                                                                  XXX                                                                                             ------->TEIL                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                            <--------                                            <----------DOF2                                 <--------                                           <---------HSFC1(2)                            --------->HSFB2a(2)                                           <---------HSFB2a(1)                          ------>ZmHOX2a(2)                                      --------->HSFB2a(2)         <---------ZAT14     --------->ARR11(3)                         ----------->GT1   --------->HSFC1(2)     <---------ZAT18     --------->ARR14(2)                         <----------ID1    --------->HSFB2a(1)    --------->ABI4(2)   <---------ARR14(2)                         *TSS         <---------HSFC1(1)          --------->ZAT14     <---------AGP1                 --------->ATHB12     <---------HSFB2a(2)     <---------DEAR3(1)     <---------CCA1(2)              <---------At4g35610    <---------LBD16         <---------LBD16         <---------ARR14(1)              --------->At4g35610  --------->GLK1(2)         <---------------------WRI1<------ZmHOX2a(2) -------->ATHB12<---------YAB1 --------->AHL20(2)   --------->GLK1(2)   ---------->DOF2--------->GLK1(1)   agtgatttgagttttcagatgattagaaggaaaaaaaattctggaactttcgagcttctgttttgcggtgctctcaaagcttatatcggatctcgaatct  14444900                     ------>ZmHOX2a(2)                     ====================================HOX2a_HOX2a                    <------ZmHOX2a(2)                    --------->GLK1(1)                    <---------GLK1(1)                    <---------HSFB2a(1)                    =====================================HOX2a_HOX2a                    --------->HSFB2a(1)                   <-----------ARR10                   <---------ARR11(1)                   --------->ARR11(3)                   <---------ARR14(2)                   --------->ARR14(2)                   <---------ARR11(3)                  <---------ARR14(1)                  <---------CCA1(2)                               <---------MYB52(1)                --------->TOE2(1)                               <---------ANAC58                --------->TOE1(1)                               <---------ANAC58 XXXXXXXXXXXXXXXXXXXX>MIR163                                --------->GLK1(1) ->ARR14(2)    <---------LBD16                              <---------GLK1(1) --ARR11(1)   --------->TOE2(2)                      <---------ANAC58 --ARR14(2)   --------->TOE1(2)                      <---------ANAC46                  <---------ANAC58 ->GLK1(2) --------->ARR14(2)                        <---------ANAC58                  <---------ANAC58 -ARR14(1) <---------GLK1(2)                    ----------->RAV1(2)                <----------DOF2 -CCA1(2)  <---------ARR14(2)        ------->TEIL ------>ZmHOX2a(1)   XXXXXXXXXXXXXXXXXXXXX>MIR4221   tgaatcggactcagaacctcggatcttcgaaaatcgacgaacatgtcttctcctggcgagtgagttccgttcccctctattgaaactttgcttcgattcg  14445000                                      <---------ARR11(3)         --------->YAB1                                      --------->ARR14(2)   <---------AHL20(2)                                      --------->ARR11(3)   <---------AHL20(1)                      <------MYB46(1) <---------ARR14(2)   <---------ICU4                   <---------ANAC58  <------ZmHOX2a(1)     --------->AHL20(2)                   <---------ANAC58<---------TOE2(2)       --------->YAB1                  <---------ZAT2   --------->LBD16         <--------ATHB1      <---------ANAC46            --------->GLK1(2)      <---------TOE1(2)      --------->ICU4       <---------ANAC58            <-----------ARR10  --------->SPL7       ----------->GT1            <---------ANAC58           <---------GLK1(2) <---------SPL7      ------>ZmHOX2a(1) --------->ICU4     ------>ZmHOX2a(2)<------MYB83<---------LBD16<---------MYB52(1)<---------YAB1 <---------YAB1   --------->ZAT2 --------->TOE1(2) <---------TOE2(3)--------->ATHB12   attttgatcgagagattcttagcttggtcttcgtacccaggattttgagtccttaggttaataattttcatgattcgtttagcttgtataggggtttttg  14445100                                                                         --------->ANAC58                                                                         --------->ZAT6                                                         <---------ANAC46--------->ANAC58                                                       <---------ZAT14 <---------DOF5.7(2)                                                --------->ANAC58       --------->MYB52(1)                                                ------>MYB83<---------ZAT14                                                ------>MYB46(1)     --------->At4g35610                                           --------->REM1(1)<---------ZAT18 --------------->AGL15                                         ----------->RAV1(1)--------->ZAT14 <---------------AGL15      <---------At4g35610     ----------->GT1   --------->ANAC58    <---------At4g35610        <-----   aagcattcaactgttgattcttctcaattcgagcgtaattttgcaacaccaagcgagttctgtgaacttgagctaacgctatttttagtatatagttatc  14445200                                                                                        <---------MYB52(1)                                                                                      --------->MYB111(1)                                                                                      <---------MYB46(3)                                                                                      --------->MYB46(2)                                                                                      --------->MYB111(2)                                                                                     <--------P                                                                                    <---------MYB52(1)                                                                                <---------At4g35610            --------->ATHB12                                                  <---------WRKY12            <---------ICU4                         <----------DOF2         --------->ANAC46           --------->ICU4                       <---------ARR11(3)         --------->ANAC58           <---------YAB1                       --------->ARR11(3)         --------->ANAC58 ---------   <---------AtLEC2                     ---------->DOF2             <---------------AtSPL8--------->MYB52(2) ----YAB1--------->YAB1              ----------->GT1         --------->AtLEC2 <---------WRKY38(1)   aatttgcattgtcatcatttgatattttggtgatttgagatgtaaagaaacatcttttatgccatggaagttagtacaagtcaactggtagttagttctt  14445300  Previous    Next  AGI:  At4g29330.1    Description:  DER1 (DERLIN-1). Identical to Derlin-1 (DER1) [Arabidopsis Thaliana] (GB:Q8VZU9;GB:Q9M0E8); similar to DER2.2 (DERLIN-2.2) [Arabidopsis thaliana] (TAIR:AT4G04860.1); similar to Derlin-1 (DER1-like protein 1) (OsDerlin 1-1) (18 kDa cold-induced protein) (GB:Q06397); contains InterPro domain Der1-like (InterPro:IPR007599) Range:  from: 14444825    to: 14447121    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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