Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             <----------DOF2     ------                                                                        --------->ARR11(3)   --------                                                                        <---------ARR11(3)   --------              ----------->GT1                                           <---------AHL20(1)   <-------            ---------->DOF2                                            <---------CCA1(2)     --------        --------->ZAT14                                              --------->YAB1       <------ZmHOX2a(2)   <------ZmHOX2a(2)         ---------->DOF2     <-----------------------TaNAC69(2) <---------CCA1(2) <------ZmHOX2a(1)         <---------YAB1  --------->AHL20(2)    --------->ZAT6   --------->YAB1   ataggatcactgaagaaagttaaacaactatcaaagacgtttcatttaaaacgcgtccaaaactaaaacactaatatcttttactcatatcgatcacgaa  14432700                                                                                             ------>ZmHOX2a(2)                                                                                           >>>>>>>>>ARR1                                                                                           <xxxxxxxxx                                                                                           --------->ARR11(3)                                                                                           >>>>>>>>>ARR2                                                                                  <---------ARR11(3)                                                                               --------->LBD16<------                                                                     --------->YAB1        <---------ARR14(2)                                                               <---------------AGL15       --------->ARR14(2)                                                               --------->YAB1 --------->HSFB2a(2)                             <---------AHL20(2)                ------->GAMYB  <---------HSFB2a(2)                       --------->TOE2(3)                       --------->TOE2(3) <------ZmHOX2a(1)       <----------DOF2 --------->YAB1                          --------------->AGL15      <------ZmHOX2a(1) ---->DOF2           <---------ARR11(3)                       <-----------------AGL3    xxxxxxxxxxxxx ->ANAC58        --------->YAB1                               --------->MYB46(3) ===================HOX2a_HOX2a ->ANAC46       >>>>>>>>>MYB98                                ----------------->AGL3   <xxxxxxxxxxxxx --ANAC55(2)   <-----------GT1   --------->YAB1               ----------------->AGL2 <----------DOF2 ->ANAC58    <---------AHL20(2)--------->AHL20(2)          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ----   agtggaaaactttattttaacataatcttattttaaaataatccctctaacaattgtatagacaaccacaattagaacgtccaggaactttaggatcgtc  14432800                                   <----------DOF2                                 <---------At4g35610                                 --------->At4g35610                            --------->DAG2      <-----------GT1    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                      --------->SPL7 xxxxxxxxxxxxxsmallRNA(si3)---------->DOF2                                        <---------SPL7 -----HVH21             --------->LBD16 --------->ANAC46                      --------->YAB1 xxxxxxxxx>smallRNA(l2)<---------HSFB2a(2)             <------ZmHOX2a(2)     <---------ATHB12 xxxxxxxxxsmallRNA(le3)--------->HSFB2a(2)            --------->ARR11(3)   --------->WOX13(1)      <- ------>DOF2        <---------ARR14(2)  <----------ID1<---------ARR11(3)<-----------HVH21 <------NtERF2   aaagcattttccaactccattgtatccagaaaagcagcttaaacgacaatcgacaagatcacaaaaatttcccttgtcaatcgtcgtatggcatcgcttc  14432900                                                                             ----------->GT1                                                                        --------->YAB1           ----                                                                        --------->ANAC46        -----                                                                --------->GLK1(2)          <---------                                                                --------->ARR11(3)        --------->TOE1(3)                                                                <---------ARR11(3)        --------->TOE2(3)                       ------------------------>ANAC81         --------->RVE1(1)       <---------GLK1(2)             --------->MYB46(3)                                --------->CCA1(1)    --------->YAB1             <---------ATHB12   ----------->GT1      --------->ZAT6     --------->ANAC55(2)---------- --------ALFIN1    ---------->DOF2          ----------->GT1  --------->AHL20(2)  --------->WOX13(1)   ccctcatcacattcaaccattaaaagagctacaagagtaaaacatcgtgttattaacacaaaaaaaaatcttatacataatgtaaatcagaaccttaaaa  14433000                                              --------->ANAC58        <----------DOF2            --------->TOE1(2)      ------->TEIL                 --------->TOE2(2) ----->DAG2                       ----------->RAV1(2)      ----------->GT1                         <- ----->DOF2             --------->CCA1(2)     --------->ANAC58           --------->YAB1          <--- ------AGL15      ----------->GT1 <---------ANAC55(2)    ---------->DOF2<---------YAB1    --------->YAB1 ----->AGL15<---------TOE2(3)   <-----------GT1 --------->YAB1   --------->YAB1       --------->ICU4   aagtaatgaactttaagaaatggaatatatgaaattacctgagaacacaagcatgagtataaagaaataagaacatgataacttggccatgatcaaaatt  14433100                                                                                       <---------TOE2(3)                                                                                 <---------TOE2(3)                                                                                --------->YAB1                                                                                <---------ICU4                                                     <----------DOF2           --------->ICU4       ---------->DOF2                        ---------->DOF2                --------->YAB1------->TEIL ----------GT1         ----------->GT1     ----------->GT1          --------->ICU4 --------->YAB1 ------AHL20(2)  <---------TOE2(3)       --------->MYB52(1)         <---------YAB1 --------->TOE2(3)<   ttaacaaaacaaagtcactgatgttttgtaaaacaagagttgataacgaaaatcgctttgtttcgatgtaatgactgtgtaataatgttaatgtatgtgt  14433200                                                                              --------->ICU4                                                                              <---------YAB1                         <---------ANAC46                               <---------------AtSPL8                      <---------MYB52(1)                              --------->YAB1                    --------->ANAC58                                 <---------YAB1                    --------->ANAC58                               --------->YAB1          --------->SPL7                   --------->SPL7                                ------>ZmHOX2a(1)       <---------SPL7                 <---------SPL7                                 --------->TOE2(3)       <---------ANAC58                <------MYB83                 --------->At5g28300--------->TOE1(3)       <---------ANAC46                <------MYB46(1)             ----------->GT1  <---------ARR11(3)  <---------WOX13(1)             <---------MYB52(1)     <---------YAB1           <---------ARR14(2) <------------CBF    <-----------GT1<-------TEIL  <---------AHL20(2) --------->AHL20(2)-------->HAHB4    <---------ANAC58 -----------TBP<---------------AtSPL3<---------AHL20(2)      --------->ARR14(2)--------->ATHB12   gtatatatactggtcgctaggtacggtatgtgtatatttttaatgactgtaaaaaaaaatcagtatccttaataatagtactgattgatgtcgtaagacc  14433300            <-----------GT1                                      ------------>CBF           --------->ICU4                                   ------------>CBF         >>>>>>>>>GT-2  <---------WOX13(1)              <---------ICU4       --------->At5g28300                        --------->ANAC55(2)      ----------->GT1  <------------CBF           --------->ANAC58                              <----      ------->GAMYB   --------->ATHB51            --------->ANAC46                              -----   <-----------GT1   <---------YAB1   --------->YAB1   <---------ATHB12          ------------>CBF   --------->MYB52(1)<---------AHL20(2)           --------->ANAC58               <---------ATHB12   atttttaacggtaattactctgtataattgataagtttattcataaatgtgcccgtaatcactccaatccaatccattttctaatcaatttcattttcca  14433400               <------ZmHOX2a(1)                                                                <----              ----------->GT1         --------->YAB1                                        <--------          --------->MYB52(1)         <---------ATHB12                              <---------HSFB2a(1)        <---------MYB52(2)          ------>MYB46(1)               ---------->DOF2  --------->HSFB2a(1)     <----------ID1                 ------>MYB83  --------->AHL20(2)              <---------ARR14(2) ---------->DOF2     <---------ARR11(3)    <----------ID1 --------->ANAC58        --------->ARR14(2) -----------AGL15    --------->ARR11(3) <---------YAB1    --------->ANAC58     <---------ANAC46<----- ---------->AGL15    --------->GLK1(2)<---------ICU4      --------->ANAC46    <---------At4g35610   aaataaagaaacaaacaggagaaaatctttcgaaaacctatcatgacaacaaaaatatacactcaaaaaaaagccttgatagcggatgttctaactttta  14433500                                                    <-----------GT1             <---------WOX13(1)                                            <---------YAB1                    --------->ATHB51                                           <----------DOF2                    --------->ATHB12                                        <---------ARR11(3)                    <---------ICU4  <----------DOF2           <---------GLK1(2)    <---------AHL20(2)          --------->ICU4 -----At5g28300       <---------REM1(2) --------->ARR11(3)              <---------ANAC58 --DOF2         <----------DOF2        <---------CCA1(2)   <-----------GT1   <---------YAB1--------->ATHB12 ------GT1     <---------DAG2--------->GLK1(2) <---------YAB1           <---------ANAC58<----------DOF2   ctgtcttttgctccaaaccttttctacacatattctgttctaaatctttattattttcaatttacatacttagtgcgtcataattgatgtctttgatttg  14433600  Previous    Next  AGI:  At4g29290.1    Description:  LCR26 (Low-molecular-weight cysteine-rich 26). Identical to Putative low-molecular-weight cysteine-rich protein LCR26 (LCR26) [Arabidopsis Thaliana] (GB:Q9M0F2); similar to LCR25 (Low-molecular-weight cysteine-rich 25) [Arabidopsis thaliana] (TAIR:AT4G29305.1) Range:  from: 14432747    to: 14433090    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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