Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          ---------->DOF2                                                                      <---------ATHB12                                                                    --------->WOX13(1)                                                            --------->YAB1                                                            <---------ICU4                                                            --------->ATHB51                <---------AHL20(2)                          <--------HAHB4                --------->AHL20(2)                          <--------ATHB1            <---------AHL20(2)                              -------->HAHB4            --------->AHL20(2)                             --------->AHL20(2)          <---------AHL20(2)                               <---------ATHB51      <---------AHL20(2)                                   <---------ATHB12      --------->AHL20(2)                <---------ARR11(3) <---------YAB1    <---------WOX13(1)                  --------->ARR11(3) --------->ICU4        ----------->GT1   -- ---------WOX13(1)          ---------->DOF2 --------->At4g35610 <-----------GT1--------->ALFIN1    <- -------WRKY18(1)<---------AHL20(2)    --------->GLK1(1) --------->YAB1--------->YAB1             ---   tgactgatttatatttttttaaattgacaacaaagtgactgaaatcttctgaatttttctaataattatccaatcaaagaaggggggaaaacttcaaaaa  14430200                              ----------->GT1                             <---------TOE2(3)                             <---------TOE1(3)                           ---------->DOF2             --------->ZAT18                      <---------AHL20(2)               <-------TEIL           <---------------AGL15               <---------TOE1(3)                   <---------------AtSPL8     --------------->AGL15               <---------TOE2(3)                   --------------->AtSPL8    <-----------------AGL1         --------->ICU4   <---------AHL20(2)    --------->YAB1               <-----------------AGL2    --------->YAB1    --------->AHL20(2)    <---------YAB1                   ----------------->AGL2 ------->AHL20(2)    <---------AHL20(2)   --------->YAB1                    -------->P --------AHL20(2)    --------->ICU4      ----------->HVH21       --------->ICU4 ------>AHL20(2) <------ZmHOX2a(1)     <---------AtLEC2<---------ZAT18     <-----------GT1   ttttattcataaatattaaggaaattatttaaaggttatttccatgacaattgtaagtacacatacaattagtagttctaccagttttggatgcaataca  14430300                                                                        <--------ATHB1                                                                        --------->ATHB12                                                                       --------->ICU4                                                               --------->HSFB2a(2)                                                               <---------HSFB2a(2)                                                               <---------HSFC1(1)                                                              <---------LBD16                                                            <---------ARR14(2)                                                            --------->GLK1(2)                                                           <---------GLK1(2)                     ---------->DOF2     --------->YAB1    --------->ARR14(2)                    <---             <-----------GT1  --------->ANAC58             <---------ARR14(2)                   -----            --------->ZAT14   --------->ANAC58       <-------MYC3      <---------YAB1       <--------     --------->AtMYB61   --------------->AtSPL3      ------->MYC3    --------->YAB1      <----------DOF2  <---------ALFIN1 ------>ZmHOX2a(1)   --------->GLK1(2) ----------->ARR10            <---------ARR11(3)   tgttccacctccattgtactcctcaaagcagtactcaacacaatcttgagggacacatggagattctggaagaatgattgtgctacaatgtcttttaccc  14430400                                                                                       --------->AHL20(1)                                                                                       --------->AHL20(2)                                                                                       <---------AHL20(1)                                                                              --------->ANAC46                                                                              --------->ANAC58                           --------->AHL20(2)                                 --------->ANAC58   <----------DOF2     ----------->GT1                     ------->TEIL    <---------REM1(2)      --- ------MYB52(1)--------->YAB1                       --------->YAB1       --------->ZAT14  <---------AHL20(2) ---->TOE2(3) <---------ATHB12         <-----------GT1--------->CCA1(2)--------------->AtSPL8-------- ---GT1   --------->MYB46(3)    ----------->GT1    <---------YAB1 <---------AHL20(2)  <---------AHL20(2)   ttagtcttttcaaccaatgaaaaaactgaaaaaatagtaaaataccatatgttatgatatgaaactatatatatgtgtacacgcttaaatattttatgta  14430500                                                    --------->TOE2(2)     --------->HSFB2a(2)                                                   ----------->RAV1(2)    <---------HSFB2a(2)--------       --------->AHL20(2)                          <---------ANAC55(2)   <---------TOE1(1)   <-------   --------->ICU4                                <-----------GT1 --------->YAB1             --------- ---------->DOF2        <---------YAB1 --------->ANAC58        --------->ANAC58             <-------- -------->GT1    <---------DAG2        --------->ANAC58        --------->ANAC58   --------->YAB1 ->ANAC55(2)     <----------DOF2     ---------->DOF2--------->TOE1(2)    <---------TOE2(1) <---------ARR11(3)   atgtaaagattaaaaactacttttttatatttggaagtggaaagcatgaaattacctgagaacacaagcatgagtacgagaaaataagaacatgatatct  14430600                                                                                                    -                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                               <-----                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                           <---------AHL20(2)                                                                                           --------->AHL20(2)                                                                                           <---------      <---------YAB1                                                               <---------ANAC58 -   --------->ICU4     ---------->DOF2                                              <---------ANAC58 < ->ARR11(3)       ----------->RAV1(1)                              <---------AHL20(2)    <-----------TBP --ARR11(3)<---------AHL20(1)                                <----------DOF2       <---------ANAC46<- >GLK1(1)  --------->AHL20(1)    <---------TOE2(3)    <---------ARR11(3)         --------->ICU4------ -GLK1(1)  <---------ARR11(3)<---------At4g35610      --------->ARR11(3)         <---------YAB1<-----   tggccatgatcaatatatcacaacaaaagagagctaatgttttgtaagttagagatgatatttctttgtttatttgttctgtaatgcttgtatatatata  14430700         <----------DOF2      <---------ARR11(3)  <------------CBF -------->AHL20(1) --------TBP ----->AHL20(2) ------AHL20(2) ------TBP --AHL20(2) ----TBP------>ZmHOX2a(2) ->AHL20(2)                                                <---------TOE2(3) --TBP--------->ARR11(3)    ----------->GT1              ---------->DOF2 -------->ARR11(3)         <---------YAB1                --------->MYB52(1) ---------AHL20(1)       --------->ANAC55(2)          --------->YAB1                               <- --------AHL20(2)      <-----------GT1              --------->AHL20(2)                     <---------WOX13(1) --->AHL20(2)     <---------YAB1                   --------->YAB1        ------->TEIL     <---------- ----AHL20(2) <----------DOF2                ----------->GT1  ---------->DOF2----------->GT1     <---   tatatattgatcttttctttattattcacatgataaaaacatctaaacagaaataaaaataaaggaaagtgaatgaatgttgaaaaatgtaagattgact  14430800                                                                            <-----------GT1                                                                         <---------YAB1                                                                        <---------AHL20(2)                                                                        <---------AHL20(1)                                                                        --------->AHL20(1)                                                                       --------->YAB1                                                                       --------->AHL20(2)                                                                      <---------YAB1                                                                    <---------ICU4                                                                    --------->ATHB51                                                                    <--------HAHB4                                                                    -------->HAHB4                                                                    --------->YAB1                                                                    <---------AHL20(2)                                                                    -------->ATHB1                                                                   <---------YAB1                                               <-----------GT1     <---------ATHB51                                         ------------>CBF        --------->YAB1                                     --------->YAB1              <---------ICU4                                   --------->AHL20(1)           --------->ICU4  --------->ATHB12                 --------->AHL20(2)           <---------AHL20(2)       <---------ANAC46 -----------CBF             ----------->GT1   --------->AHL20(2)<---------ATHB51     <-----------HVH21 --CBF           <---------DAG2   --------->YAB1 --------->TOE2(3) --------->ICU4 <-------MYC3 ------ZAT14   ------->TEIL----------->GT1 --------->WOX13(1)   --------->AHL20(2)------->MYC3   acattgatttctatatgcaccttctcaacatgttaaaaataatagcaattaacttaattcatagaaataattattatatttccatgtggtcatgtgtaat  14430900                      --------->DOF5.7(2)                     --------->TOE1(3)                   <---------TOE2(3)                   <---------TOE1(3)                <---------YAB1              --------->YAB1              <---------ICU4              <--------HAHB4              <---------AHL20(2)              --------->ATHB51                                                                   <---              -------->ATHB1                                                              <---------YAB1              -------->HAHB4                                                            -------->HAHB4             <---------YAB1                                                             --------->YAB1             <---------ATHB51                                                           <---------ICU4             --------->ICU4                                                            --------->ICU4           <---------ICU4                                                            <---------ICU4           --------->YAB1                                                           --------->AHL20(2)          --------->ICU4                                     ----------->GT1        <---------AHL20(2)          <---------ATHB12                                  --------->DAG2          <---------ATHB51          <---------ATHB51                                 ---------->DOF2          --------->ICU4          --------->AHL20(2)                          <---------------AGL15      --------->AHL20(2)          <---------AHL20(2)                          --------------->AGL15     --------->AHL20(2)<--     <-------TEIL <-----------GT1                     --------->TOE2(3)         <---------AHL20(2)<--    --------->CCA1(2)--------->TOE2(3)                <----------DOF2 ---------->DOF2--------->YAB1 -   acatagatacaaataattattaacgttatcccatggttttctatccattttttatactttaaaaagtgaattcaaagttcaaataaataattatgagatt  14431000           <---------ANAC58           <---------ANAC58 --------GT1                                                        <-------TEIL -------TOE2(3) <---------GLK1(2)                        <------ZmHOX2a(2)    ---------->DOF2      -- -------YAB1  ----------->ARR10    <----------DOF2      <---------ARR11(3)<----------DOF2 ---------->DOF2 -------->TOE2(3)         --------->TOE2(3)             --------->ARR11(3)--------->TOE2(3)      ----   aacattatcccatgcgttgattctctatccataaactctttttttttttttgtcaaacgatctatccatatacatactttaaaagttgtattcaaaggcc  14431100  Previous    Next  AGI:  At4g29283.1    Description:  LCR21 (Low-molecular-weight cysteine-rich 21). Identical to Low-molecular-weight cysteine-rich protein LCR21 precursor (LCR21) [Arabidopsis Thaliana] (GB:P82735); similar to LCR22 (Low-molecular-weight cysteine-rich 22) [Arabidopsis thaliana] (TAIR:AT4G29280.1); contains InterPro domain S locus-related glycoprotein 1 binding pollen coat (InterPro:IPR010851) Range:  from: 14430229    to: 14430607    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version