Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                                                                                  ---                                                                                                  <--                     --------->MYB52(1)        --------->YAB1                                   -----                   --------->YAB1              --------->ATHB12                                ------                  <---------ATHB12            <---------ATHB12                                 <-----                  <<<<<<<<<ARR2         --------->At4g35610                                  --------     <---------WOX13(1)                 <---------At4g35610      <---------GLK1(2)          ---------  <---------YAB1--------->WOX13(1)--------->GLK1(2)  <---------RVE1(1)                      <-------- ---->DOF2--------->ANAC46       <---------GLK1(2)------>ZmHOX2a(2)                        <---------TOE2(3)   agctctgattgtccgaaacaatcaaacggagaccagaatcgaagctcaatgatcgatattttctactgattctagggattaaaaaccccaattgatgatg  14406200                            <---------TGA1a     ------>ZmHOX2a(2)      --------->TGA1a  --------->ATHB12          --------->O2 <---------YAB1             <---------O2 ------->YAB1               <---------ANAC46 ------>ICU4              ------>NtERF2 -------YAB1             ----------->HVH21 ---->YAB1               --------->DEAR3(1) --------->GLK1(2) --->ICU4          <---------ZAT18         <---------GLK1(2)                                   <----- ----YAB1          <---------ZAT14      ------>ZmHOX2a(2)                             --------->At4g35610 ->YAB1            --------->ZAT18   --------->ATHB12                                 <---------At4g35610 >ICU4             --------->ZAT14  <---------YAB1                                  <---------bZIP60(1) -YAB1        <---------GLK1(2)  --------->ICU4                                     --------->bZIP60(1)   atgatgatcggtttcagattgtgtactccgacgtgaagatgatcggaatctaaacaaatccatacaatgaaagattacagaaaatgtcatcacccatttt  14406300                                                                        ----------->GT1                                                                 <---------------AGL15                                                                 --------------->AGL15                                              <---------AHL20(2)<-----------------AG            <----                                             <---------AHL20(1) <-----------------AGL3      <--------                                             --------->AHL20(2) <-----------------AGL1 --------->AHL20(2)                                             <---------AHL20(2) ----------------->AGL2 <---------AHL20(2) ----AHL20(2)                    <----------DOF2       <---------AHL20(2)              <---------ATHB51   ttttttatatgaaacccaaaaaatggaacagtcttctttgacttcaatttttttttttatattgttaacaaaaatggaaactttagaaaataattcacct  14406400                                                                     --------->MYB55(2)                                                                     --------->ALFIN1                                                                     <---------AtMYB61                                                                     <---------MYB46(3)                                                                --------->ANAC55(2)                                                             ----------->HVH21                                                    --------->ARR14(2)                                                    <---------ARR14(2)                                                    --------->ARR11(3)                                                   --------->At4g35610<------MYB83                                                <---------At4g35610 <--------P                                             <------ZmHOX2a(1)  <---------ANAC55(2)                                             ===============HOX2a_HOX2a                                          <------ZmHOX2a(1) <-----------HVH21                                          ==================HOX2a_HOX2a                                        --------->ALFIN1--------->ANAC58                                       =====================HOX2a_HOX2a                                       <------ZmHOX2a(1)--------->ANAC46 <---------MYB46(3)                                     --------->ALFIN1   --------->ANAC58<---------AtMYB61 ------DOF2                         ========================HOX2a_HOX2a --------->ALFIN1       ------ ---GT1             ----------->GT1 <------ZmHOX2a(1)<------ZmHOX2a(2)<------MYB46(1)          <-----   ttgaagaaatttgaaaccaagatggaaacaagaagtaaggaggaggaggaagcagatcaggccatcacgggctggtggtgaatgtatggatgaagaagat  14406500                                                  <---------ANAC55(2)                                                  --------->ANAC55(2)                                                --------->CCA1(2)                                                --------->ARR14(1)                                               --------->ARR14(2)                                             ----------->ARR10                                        <---------YAB1                                      --------->YAB1                                      <---------ICU4                                      --------->ATHB12                                     --------->ICU4                                     <---------ATHB12                                    <---------TOE2(3)                      <---------AHL20(2)                               <----------DOF2 <---------ARR14(2)          <---------YAB1                     ---------->ID1--------->YAB1<-------TEIL <---------At4g35610 <----------DOF2       --------->ALFIN1       <---------ANAC58 --------->TOE1(2)           --------->AHL20(2) --->ARR11(3)        <---------TOE2(3)-------->HAHB4        <---------HSFB2a(2)<---------AHL20(2) *TSS ----ARR11(3)  <---------YAB1 <---------ANAC58 --------->ARR11(1)     ----------->GT1           <----   aatgaacaagtggcgatatgtttgtggtttttgcttttaatgatgagaagatacgagacatttcagaagagaaggttttaattactttggtgcaaaattg  14406600                                                                <---------YAB1                                                              <--------HAHB4                                                              -------->HAHB4                                                              --------->YAB1                                                              --------->ATHB51                                                              -------->ATHB1                                                              <---------AHL20(2)                                                              <---------ICU4                                                             <---------YAB1                                                             <---------ATHB51         <------------CBF                                    --------->ICU4        <--------ATHB1                                     --------->YAB1        --------->YAB1                                    <---------ATHB51        -------->ATHB1                                    <---------YAB1        <------------ATHB5                                --------->ICU4        <---------ICU4                    --------->CCA1(2)<---------ICU4        --------->ATHB12                 --------->ARR11(3)<--------ATHB1        --------->ATHB51                 --------->ARR11(1)-------->HAHB4       <---------ATHB51                  <---------ARR14(2)<--------HAHB4       <---------ATHB12  --------->AHL20(2)             --------->YAB1   <------ZmHOX2a(1)       --------->ICU4    <---------AHL20(2)        <---------ANAC46  ---------->DOF2             <---   ------------>CBF  <---------YAB1      --------->ARR14(2)--------->ATHB51                     <---- -------GT1     ----------->GT1<-------TEIL     <---------DEAR3(1)--------->YAB1     <---------TOE2(3)   accatttcaataattgaagagttatatttaaaattcgttgaaagatttgggctgtgtgtaataattattaataaaggactgatttttgatgttttttttt  14406700                                                                                        --------->CCA1(2)                                         <------MYB46(1)                                --------->ARR14(1)                                         <---------ANAC58                              --------->ARR14(2)                                         <---------ANAC58                              --------->ARR11(1)                                         <------MYB83                                  <---------ARR14(2)                                        --------->MYB55(2)          <---------------AGL15 --------->ANAC46                                        <---------MYB46(3)          =================================                                       --------->ALFIN1            ==================================                                     <---------ANAC58              <-----------------AGL2 <---------ANAC55(2)                             <---------AHL20(2)                    ----------------->AGL3 --------->ANAC55(2)                             --------->AHL20(2)                    ----------------->AGL2 --------->ANAC58                          <---------AHL20(2)                       ==================================                         --------->AHL20(2)                        <-----------------AGL3 --------->ANAC58             --------->ICU4  <---------AHL20(1)               <------MYB46(1)         <------ZmHOX2a(1)     ---------->DOF2     <---------AHL20(2)                   <------MYB83--------->HSFB2a(2) <---------AHL20(2)<---------YAB1    <---------ANAC58        --------->MYB59        <---------TOE2(3) ------AHL20(2)--------->ARR11(3)    <---------ANAC46       <--------P    <---------HSFB2a(2) -----AHL20(2)--------->ATHB12<---------AHL20(2)    --------->ATHB12--------------->AGL15--------->SPL7   tattttaaaaagagaatgattttgatattaatttttttggagtgggtgttttggttattggagtaggtttctagttatagaaattttaggatacggcatg  14406800                                                                              <---------GLK1(1)                                                                            --------->ATHB12                                                                          <----------DOF2                                                                         <---------ANAC58                                                                         <---------ANAC58                                                                --------------->AGL15                                                                <---------------AGL15                                                               <---------------AGL15                   <---------MYB52(1)                          --------------->AGL15                 --------->DREB2C(2)                           ----------------->AGL1                 --------->DEAR3(1)                            <-----------------AGL1                <---------LBD16        --------->AHL20(2)      ----------------->AG              <---------ALFIN1      ===========================================MADS_MADS              --------->REM1(1)     <---------------AGL15     ----------------->AGL1             <---------ZAT14     ----------->HVH21            <-----------------AGL1    <-----------GT1 ===============================================================================MADS_MADS     <------ ===============================================================================MADS_MADS     ------- ===================================================MADS_MADS <-----------------AGL2 <---------ICU4 -   aactatgctctagcctacaccggcatgtttctcatttgacataaattgtaagtcaaaacatatttccctaattgggcttgatttccctaattacatttat  14406900                                                                              ----------->HVH21                                                                            =========================                                                                            --------->O2                                                                            --------->TGA1a          --------->SPL7                                                    <---------TGA1a       --------->ANAC55(2)                                                  <---------O2       <---------ANAC58                                                   <---------ALFIN1       <---------ANAC55(2)                                                ----------->RAV1(1)       <---------ANAC58                                                --------->PCF2       <---------ANAC46                                                ------>NtERF2 ---AHL20(2)                                                          <-----------TCP11(1)     <----- -->AHL20(2)--------->ZAT6                          ==================================bZIP_DOF<------ -------->YAB1        --------->MYB52(1)            ---------->DOF2 <---------LBD16           -------   tttcatattgcgtaagactaggcttaagggaaattgacacaaaaatgtgtaagggaaagaactaagtatgtccggcccacatgacagaacatctaattta  14407000                                                      --------->TOE2(3)                                                      ------->GAMYB                                                      --------->YAB1                                                     <---------MYB55(2)                                                     --------->MYB46(3)                                                    ------>MYB83                                                    -------->P                                                    ------>MYB46(1)                                               >>>>>>>>>>WRKY26                                               <-----------GT1      --------->DAG2                           >>>>>>>>>>WRKY43                  <----------DOF2     ---------->DOF2          <---------YAB1   >>>>>>>>>>WRKY38              --------->GLK1(1) ===============bZIP_DOF   --------->GLK1(2)  --------->WRKY12               <---------GLK1(1) ----AHL20(2)          --------->YAB1         --------->WRKY38(1)           --------->ARR11(3) ---AHL20(2)      <---------ZAT18--------->GLK1(1)--------->MYB46(3)        <---------ARR11(3) -->AHL20(2)      --------->ZAT18<---------GLK1(1)--------->AtMYB61       <---------TOE2(3)   aaatgggtaaagctcataagcccactaatattctgatttctgaaccaattgaccaaccacaatttgcccatgttctaagatttctttcatgtgtttacca  14407100  Previous    Next  AGI:  At4g29220.1    Description:  phosphofructokinase family protein. similar to phosphofructokinase family protein [Arabidopsis thaliana] (TAIR:AT4G32840.1); similar to phosphofructokinase family protein [Arabidopsis thaliana] (TAIR:AT5G56630.1); similar to phosphofructokinase family protein [Arabidopsis thaliana] (TAIR:AT4G26270.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43755.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65420.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74837.1); contains InterPro domain Phosphofructokinase-core; (InterPro:IPR015913); contains InterPro domain Phosphofructokinase; (InterPro:IPR000023); co Range:  from: 14403353    to: 14406598    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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