Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      <---------MYB52(1)                                                               <-----------GT1                                                           <---------ICU4                                                           -------->ATHB1                                      <------MYB83         <---------AHL20(2)                                      <---------MYB46(3)   --------->ATHB51                                      <------MYB46(1)      --------->YAB1                                     <---------DEAR3(1)    -------->HAHB4                                     <---------AtMYB61     <--------HAHB4           <------NtERF2          <---------ANAC58        <---------YAB1          --------->HSFB2a(2)     <---------ANAC46        <---------ATHB51          <---------HSFB2a(2)     <---------ANAC58      <---------ICU4      <---------MYB46(3)         <-------TEIL           <--------HAHB4     --------->ALFIN1         <------ZmHOX2a(1)         --------->YAB1     <---------AtMYB61      <---------TOE2(2)           --------->ATHB51 --------->ZAT2            <------NtERF2               --------->ICU4 --------->At4g35610      <---------SPL7             --------->TOE2(3) -------->GLK1(2)        <---------ANAC46            --------------->AGL15 ---HVH21--------->ETT(1)<---------ANAC58     <---------YAB1 <---------YAB1                         < ->HVH21 <---------LBD16 <---------ANAC58  --------->ICU4 --------->ICU4     ----------->GT1   ------   agaagctgtggtcgggaatatcgagaggcgtaggatgcgttggtgattcttatttccataattattatccgtttagttttggttaattaggggagtaatg  14380400      <---------AHL20(2)     <---------AHL20(2)     --------->AHL20(1)     <---------AHL20(1)     --------->AHL20(2)  <---------AHL20(2)                                                 <---------ANAC58  --------->AHL20(2)     --------->YAB1                              <---------ANAC46 <---------AHL20(2)     <---------YAB1                   <---------YAB1 --------->AHL20(2)  --------->ICU4                    <---------AHL20(2) ---------YAB1       <---------AHL20(2)               --------->AHL20(2) ----->GT1           <---------YAB1          ----------->HVH21       <---------ANAC58   ttattaatttaatatagtttgatattattatagttttctaagtttcactgacaaaatttaaaattgttgtttcttgtatgctacatattctatttctatg  14380500                                  --------->TOE1(3)                                          <-------                                 --------->At4g35610                                         <-------                    <-----------GT1                                                        <---------MYB46(3)            ----------->GT1<---------YAB1                                     --------->MYB52(1)           <---------ANAC46<---------AHL20(2)                        --------->ALFIN1     ------>ZmHOX2a(2)          <---------LBD16 --------->AHL20(2)       --------->LBD16 <---------ANAC46   --------->ICU4   taagttttttgctacggataatttacatttttattagcttaactaaaattatccgagtttttttatattcggtgttgagaaaacggtactgatcggttag  14380600                                                                                               ------                                                                                               <-----               <-------GAMYB                                                                   ------              <------MYB83                                                                     <-----              <------MYB46(1)                                                                  <-----              ----------->GT1                                                                 <------         <---------MYB46(3)                                                                   -------     --------->ATHB51               <---------YAB1                                            =======     -------->ATHB1         ------>MYB46(1)                                                   =======     <--------ATHB1       --------->AtMYB61                                                   <------     --------->ATHB12     <---------MYB59            --------->ANAC58                         <------     <---------ICU4       <---------MYB46(2)         --------->ANAC58                         -------    <---------ATHB51      <---------MYB111(1)    --------->ANAC58            --------->MYB46(3)------    <---------YAB1       --------->ANAC46        --------->ANAC58           -------->P--------->YAB1< --MYB52(1)  --------->MYB59------>MYB83      --------->REM1(1)             ========================= -P --------->ICU4     <-----------GT1    --------->At4g35610             --------->MYB46(3)  -------   taaacaattattggttcggttaaatataccaaaccaatattatcggctacaacgcatgcaagagactattttgtaaacaaccacttaaacataaacacgt  14380700  --------->ANAC46 ->MYC4 --MYC4 ->MYC2 --MYC2 --MYC3 ---ANAC55(2) -->ANAC55(2) ======================================bZIP_DOF ======================================bZIP_DOF ---O2                       --------->DAG2 ---TGA1a                   ---------->DOF2 -->TGA1a            --------->ALFIN1 ->MYC3            <---------ANAC58           <---------TOE1(2)                  --------->ANAC46 ---------DOF5.7(2)<---------ANAC58     <---------ANAC58                     ---------->DOF2 ===MYC_MYB        <---------ANAC46     <---------ANAC58            --------->ZAT14 -->O2             >>>>>>>>CAMTA3---------->DOF2           *TSS     <---------ZAT18      --------->MYB46(3)   gttaacgcgattcacatcaacgcgtgtggaaaaaggaaagttgcttccttcgttcttaatcccttctctgtgaacacaaaaacgcgaaataacaaacaaa  14380800                                                                                               ------                                                                                              <------                                                                                           ==========                   <---------ICU4             ------>ZmHOX2a(2)    <---------GLK1(2)<---------AHL20(2)                   --------->ATHB51         --------->ARR11(3)     --------->ARR14(2)      ==========                  <---------MYB52(1)        <---------ARR11(3)     <---------ARR14(2)      ------>ZmHOX2a(2)            --------->GLK1(1)   <---------ANAC46     <---------ALFIN1           <---------RVE1(1)   aaccaatacaagtgatttccattatttctcgtctacgtatacaattgatcttcccccatctccaattcagatttggacagaggtattttttgatccgatt  14380900                                                                                           <---------ANAC46                                                                                       <--------P                                                                                       <---------MYB52(1)                   --------->TOE1(1)                                                  <-------GAMYB           <---------ARR14(2)                                                        <---------MYB46(3)           --------->ARR14(2)                                                        <---------DEAR3(2)          <---------CCA1(2)                                                          --------->MYB55(2)          <---------GLK1(2)                                                         <---------DEAR4(1)        =====================================HOX2a_HOX2a                            <---------DREB2C(2)        ------>ZmHOX2a(1)                                                           <---------DEAR3(1)    ------->TEIL  ------>ZmHOX2a(1)                                                 <---------ANAC46    --------->GLK1(2)                                                               <---------At1g77200    <---------ARR14(2)<---------TOE2(2)                                           ------------>AtMYB77    --------->ARR14(2)<---------TOE1(2)               --------->At5g28300         <-----------HVH21 --->GLK1(2)      ===========================HOX2a_HOX2a                       ------>ZmHOX2a(2) ---GLK1(2)------->TEIL                              --------->LBD16       ----------->HVH21 <------- ========================HOX2a_HOX2a               <---------LBD16      --------->TOE1(2)<------MYB83 ==============HOX2a_HOX2a            ------>ZmHOX2a(2)                 --------->TOE2(2)<------MYB46(1)   cttacgaatcctgaatcttcctcgtagattaatcgatcgatcggttcttaattcgcggaaaattgtttcagtaacctgtgatcgtgtcggttggggtaga  14381000                                                   <-----------RAV1(2)                                                  <---------ZAT2                                                  --------->ZAT2                                                 --------->ANAC58                            ------->TEIL     --------->ANAC58                       <---------ICU4        --------->ANAC58                      --------->ICU4       --------->GLK1(1)                      <---------YAB1    --------->LBD16                    <---------ICU4     <---------HSFB2a(2)                             --------->MYB52(1)             --------->At4g35610      <---------LBD16 <------ZmHOX2a(1)             --------->TOE1(3)           <---------PCF2   --------->ARR14(2)   --------->ANAC46                   --------->TOE2(3)  <------ZmHOX2a(2) --------->YAB1<----------DOF2--------->ANAC58                 --------->ANAC58 -P     --------->ALFIN1 <---------YAB1--------->HSFB2a(2)                        --------->ANAC58   agagatcgaagtgggagcaaaatcatgatgaatcggctattcgggaaacccaagcaggaggctaatgctctccaaactttagacaagcttaacgaggtat  14381100                                                                          --------->ZAT14                                        ---------->DOF2               ------>ZmHOX2a(2)   --------->TOE2(3)                                     ------>ZmHOX2a(2)               --------->GLK1(1)    --------->YAB1                             <---------ANAC58                        <---------GLK1(1)<---------AHL20(2)                             <---------ANAC58                 --------->ZAT14   <---------MYB52(1) --                            <---------TOE2(3)                 <---------ZAT14 <---------ZAT6    -----                           <-----------GT1            ------>ZmHOX2a(2)   <---------ZAT14 --------->TOE1(3)   catctacttatctacttctctctctcaatttacgttcgatctgaaagaaatatcgatctctctgtgtactgatctctgtactgtttgtttaatcttaaac  14381200                              --------->GLK1(2)                                                  <---                             --------->ARR14(2)                                        --------->AHL20(2)                             <---------GLK1(2)                          --------->GLK1(1)      ------                             <---------ARR14(2)           --------->ATHB12   --------------->AtSPL8 -------->DOF2          --------->ARR14(2)  <---------AHL20(2)          <---------GLK1(1)  <---------YAB1 ---->TOE2(3)           <---------ARR14(2) --------->AHL20(2)      <---------LBD16     <---------AHL20(2)   ttaaatcaccataagacatcacttcaaatccgattctcgtttatatttaatactcaaaaacgattgaattggggatttctgagtacaatttatatgatcg  14381300  Previous    Next  AGI:  At4g29150.1    Description:  IQD25 (IQ-domain 25); calmodulin binding. similar to IQD26 (IQ-domain 26), calmodulin binding [Arabidopsis thaliana] (TAIR:AT3G16490.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65439.1); contains InterPro domain IQ calmodulin-binding region (InterPro:IPR000048) Range:  from: 14378773    to: 14380517    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g29160.1    Description:  SNF7.1. similar to SNF7.2 [Arabidopsis thaliana] (TAIR:AT2G19830.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68229.1); contains InterPro domain Snf7; (InterPro:IPR005024) Range:  from: 14380759    to: 14382672    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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