Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <---------AHL20(2)                               <---------AHL20(1)                 --------->HSFB2a(2)                               <---------ARR11(3)                 <---------HSFB2a(2)                               --------->ARR11(3)           --------------->AGL15                               --------->AHL20(1)           <---------------AGL15                               --------->AHL20(2)          ----------------->AGL3                          <---------AHL20(2)               <-----------------AGL3                    <---------AHL20(2)                     ==========================================              --------->YAB1--------->AHL20(2)             <-----------------AGL2           --------->TOE2(3)<---------AHL20(2)           <-----------GT1      <---------ICU4--------->AHL20(2)               --------->AHL20(2)            --------->AHL20(2)     --------->AHL20(2)   --------->AHL20(2)         <---------AHL20(2)            <---------ARR11(3)     <---------AHL20(2)  --------->YAB1           --------->ARR14(2)             --------->ANAC58 --------->ICU4  <---------AHL20(1)               <---------ARR11(3)          <---------ATHB12     -- -----At4g35610  --------->AHL20(1)               <---------GLK1(2)         --------->WOX13(1)    <-- ---->At4g35610<---------AHL20(1)        --------->AHL20(2)----------------->AGL2--------->ANAC58 ---   ctacttattaattccataatatttttatattaatatatttcaaaaaaatccagattttatttctatttttagaactataaatcaagaaattatctatgta  14378400         ------>ZmHOX2a(1)  <---------AHL20(2)      --------->YAB1                                           <---------ANAC55(2) =====================================MADS_MADS                          --------->ANAC58 ------->TOE2(3)         <---------YAB1                                  --------->ANAC58          -- -------ZAT6          --------------->AGL15            --------->ANAC46  --------->ANAC46      ------ -------->GT1<---------AHL20(2)                     --------->TOE1(2)   <---------LBD16     <--------   atgttaaattcctatttttttttagttattatagaaactgaaaatggtctaattcatacgaagtcgatttttctcacggcatattatgtaaaccatgaat  14378500     <---------YAB1                                                                --------->ZAT14  <---------AHL20(1)                                                           <-----------GT1  --------->AHL20(1)                                                     --------->TOE2(3)  --------->AHL20(2)                                                  <-----------GT1       ---------  <---------AHL20(2)                                                <---------KAN4(2) --------->ANAC46 ----->TEIL                             --------->AHL20(2)       <---------YAB1--------->ZAT6 ->TEIL                                 --------->YAB1   <---------MYB59 --------->TOE1(3) --------->DAG2 -YAB1    --------->ATHB12   <-------TEIL                --------->TOE2(3)<----------DOF2 ---------->DOF2   gtattttattagtgattcgtaaaccctaagtttcatatacaataaaaacaaaaatggaacctaaattacgaataacctttatcactatacgataaagtat  14378600                                                  ------->TEIL    <---------AHL20(2)                                                  <---------ARR11(1)                                   ----------------->AGL3        <---------AHL20(2)                               --------->YAB1     <---------ARR14(2)                              <---------ATHB12    --------->ARR14(2)       <---------GLK1(2)              ------->TEIL    --------------->AtSPL3 <----------DOF2       --------->ARR14(2)          --------------->AtSPL8<---------SPL7   <---------CCA1(2)--------->AHL20(2)        <---------AHL20(2)   ------>MYB83        <---------ARR14(1)   <-----------GT1     --------->YAB1          ------>MYB46(1)<------MYB83      <---------AHL20(2)        --------->AHL20(2) --------->ZAT6        <----------ID1      --------->MYB59   <---------YAB1<---------ARR14(2) -->GT1--------->AHL20(2)  --------->AtMYB61<------MYB46(1) --------->AHL20(2)----------->GT1      <-   aaaacactaataaatggaccctattacgaccaatcgtaccaatatttggtcgtatctttcatttttatttatttacagatttgtaaattttaaaatagac  14378700                  --------->AHL20(2)                                              --------->GLK1(2)                  <---------AHL20(2)                                     <---------YAB1               --------->AHL20(2)                                     --------->ICU4          --------->WRKY18(1)                                       --------------->AGL15          ------------>CBF                                          <---------------AGL15        <------MYB83                                               ----------------->AGL2        <------MYB46(1)                   ------->TEIL     ------>MYB83<---------ICU4       <---------AtMYB61         --------->AHL20(2)        ------>MYB46(1)       <---------GLK1(2)    <-----------RAV1(1)         --------->AHL20(2)       <---------MYB59 *TSS---------->DOF2 ---------DOF2 --------->YAB1 --------->YAB1 <-----------GT1       ----------------->AGL1   acttttgtgttggtcaataaaaaaatagactaaaataaaaaatgtatttacaagtgaaaccaaactaaaaccattatgagaaagaatctcacaaaattga  14378800                                                                                            ------>NtERF2                                                                                            ---------                                                                                           --------->ANAC46                                                                                       ------>MYB83                                                                                       ------>MYB46(1)                                                                                     --------->DREB2C(2)                                                                                     --------->MYB46(3)                                                                                     --------->DEAR3(1)                                                                                     --------->DEAR4(1)                                                                                    --------->ATERF1(1)                                                                                    --------->ORA47(2)                                                                                   <---------ATERF1(1)                                                                                  <---------ALFIN1                                                                                  --------->DEAR3(1)                                                                                --------->LBD16                                                                               <---------ETT(1)                                                                               <---------ATERF1(2)                                                                               --------->HSFB2a(2)                                                                               --------->ATERF1(2)                                                                               <---------HSFB2a(2)                                                                    ------>MYB46(1)------>NtERF2                                       <---------MYB46(3)           ------>MYB83------>NtERF2                                      --------->ALFIN1           --------->HSFB2a(1)--------->DEAR3(2)            <----------ID1            <---------AtMYB61          <---------HSFB2a(1)<------NtERF2    ---------->DOF2         --------->ANAC58          <---------LBD16         <---------LBD16    <---------ZAT14         --------->ANAC58       <---------MYB46(3)  ------>ZmHOX2a(1)  <---------LBD16   ccagagtaaagagagagacaaaaatgggtcgagcaacgaggtggttcaagggtttgttcggaatcaaaccttcctcttgttccggcaccgactccggcac  14378900                                                             --------->HSFB2a(2)                                                             --------->LBD16                                                             <---------HSFB2a(2)                                                       <---------ARR11(3) <---------ANAC46                                                       --------->ARR11(3) <---------ANAC58                                                    ------>MYB83---------->DOF2               -------->ZAP1                        --------->MYB52(1)    <---------ANAC58             <---------WRKY18(1)                  <---------MYB59         <---------AtLEC2            --------->WRKY38(1)                   --------->AtMYB61      <-------TEIL            --------->WRKY12    <---------At4g35610 ------>MYB46(1)   <---------HSFC1(2)          <--            ----------->HVH21   --------->ZAT2    <---------MYB111(2) <---------At4g35610        <---       --------->DEAR3(1)       --------->At4g35610--------->MYB55(1) --------->At4g35610        <---      --------->DEAR3(2)        <---------ZAT2    <---------MYB46(2)  <---------ZAT2             ----      --------->MYB46(3)    ----------->RAV1(1)   <---------MYB111(1) --------->HSFC1(2)     --------     <---------At5g28300   ----------->HVH21      <---------MYB55(2)  <---------HSFB2a(1)    --------    <-----------GT1        --------->ANAC46       <---------MYB52(2)  --------->ZAT2         -------- >LBD16------->GAMYB <----------DOF2             --------->ANAC46    --------->GLK1(2)  ------>ZmHOX2a(1)   tatttctaaccgccttgaccgctctttatgcgacagctacgagactataccacctaacatctccgagaaagaagctgcgtggctaaggtccttctacgca  14379000                                                                                   ------>NtERF2                                                                                   <---------ATERF1(1)                                                                                   <---------MYB46(3)                                                                                 <------NtERF2  <----                                                                                 --------->ATERF1(1)                                                                                 <---------At4g35610                                                                 ----------->TGA1------>NtERF2  -----                                                         --------->At4g35610    <---------ERF1  <----                                                         <---------At4g35610    <---------RAP2.3(1)                                                         --------->ZAT2         <---------RRTF1(1)                                                      <---------At4g35610      <---------DEAR3(1)                                                  ================RAV          <---------RRTF1(3)                                                  ----------->RAV1(1)   <---------At4g35610     -----                                                  =======================RAV   <---------RAP2.3(3)                                                  ------>NtERF2  ----------->HVH21<---------RAP2.6(2)                                                  <-----------HVH21     --------->At4g35610   <------                                                 ----------->HVH21  --------->ANAC58--------->At4g35610                                                ------>NtERF2  <---------At4g35610--------->ATERF1(2)                                                --------->LBD16<---------ZAT2  <---------ANAC58<-----                                               --------->RAP2.6(2)<---------TGA2(2)<---------ERF1                                           <---------RAP2.6(2) --------->At4g35610--------->DEAR3(1)                                          --------->At4g35610  --------->ZAT2  <---------RRTF1(2)                                        <--------P=========================RAV <---------RAP2.3(2)                                       <-------GAMYB================RAV <------NtERF2  ---------->DOF2                                      <---------MYB46(3)===================RAV <---------RAP2.6(2)                                     <---------ANAC58 <---------ZAT2--------->ANAC58<---------At4g35610       ----------->GT1               <---------TOE2(3)--------->At4g35610      <---------ANAC46<-----      <------ZmHOX2a(1)              <---------ANAC58 ----------->RAV1(2) <---------MYB46(3) --------    --------->ALFIN1                 <---------ANAC46 --------->ZAT2--------->ANAC46<------NtERF2 -------ANAC46                       <---------RAP2.6(2)<-----------RAV1(1)<-------GAMYB--------->DAG2 ---NtERF2                          <---------LBD16 <-----------RAV1(2)------------>AtMYB77<---------RAP2.6(2) ------At4g35610         --------->ANAC58 <---------At4g35610  ----------->RAV1(2)<---------DEAR3(1) ----->At4g35610         --------->ANAC58<---------MYB46(3)  <-----------RAV1(2)<---------ATERF1(1) < ->ANAC46         <---------ANAC46 ------------>AtMYB77 =================RAV  <---------LBD16<------- ->ANAC58   ---------->DOF2  --------->ANAC58<---------At4g35610<---------MYB52(2)<---------ANAC46 <- ->ANAC58<------ZmHOX2a(1)   --------->ANAC58------>NtERF2  <---------At4g35610<---------ANAC58<-----   gcgggagaggaggaaaaagagcgtagaacgcatgcaattgcggttgctgccgcgacagctgctgcagctgacgcagcggttgcggcggctaaagcggctg  14379100        --------->MYB59      <---------MYB52(1)     <-------GAMYB    --------->MYB111(2)    <---------MYB46(3)    --------->MYB55(2)   <---------MYB55(1)   <--------P  <-------GAMYB <---------MYB46(3) -----At4g35610 ---->At4g35610                                                                             <-------- -----ZAT2                                                                                ----------- ---->ZAT2                                                                       <------ZmHOX2a(2) ---DEAR3(1)                                  --------->ALFIN1                  <---------ARR11(3) ----ATERF1(1)                 --------->ALFIN1 <------NtERF2                   --------->ARR14(2) ----MYB46(3)         --------->ANAC58      <---------bZIP60(2)                 --------->AGP1 ->At4g35610          --------->ANAC58<<<<<<<<<MYB98    <---------ANAC46        <---------ARR14(2) ---------ANAC46    <---------WRKY12 <-------GAMYB ---------->DOF2             --------->At4g35610 --At4g35610        <---------WRKY38(1)   <------ZmHOX2a(1)         <---------At4g35610  ------->TEIL --------LBD16     --------->WRKY18(1)<---------MYB52(1)<---------ANAC58       <---------At4g35610 ------RAV1(1)    <-----------HVH21 <---------MYB46(3)  <---------ANAC58   --------->AtLEC2<---------   ctgcggttgttaggctccaaggtcaaggcaagagtggtccgttaggaggtggcaaaagccgtgagcatcgtgctgctatgcagatccaatgtgcctttag  14379200                                                                                                <----                                              <---------AHL20(1)                               <-----                                              --------->AHL20(1)                        --------->TOE2(3)                                     --------->YAB1                                    <---------ANAC55(2)                                     --------->ATHB12          ------->TEIL            <---------ANAC46                                     <---------ICU4         --------->ANAC55(2)        --------->ANAC55(2)     --------------->AtSPL8         --------->ICU4      <----------DOF2                ----------->GT1 --DOF2                             <---------ATHB12   <---------ICU4    <---------MYB52(1)  -------- ------>AGL1          <-----------GT1<--------HAHB4<---------AHL20(2)   <---------RAP2.6(3)---------- ------AGL15  --------->ZAT6  <-----------GT1 <---------ARR11(3)       ----------->GT1<--------------   aggctacttggtactaacacaatttttcaatttttctaatcatttcaatatttttaatctttatgtatttgagccgttacatttttgtaacgtaaaaggc  14379300  Previous    Next  AGI:  At4g29150.1    Description:  IQD25 (IQ-domain 25); calmodulin binding. similar to IQD26 (IQ-domain 26), calmodulin binding [Arabidopsis thaliana] (TAIR:AT3G16490.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65439.1); contains InterPro domain IQ calmodulin-binding region (InterPro:IPR000048) Range:  from: 14378773    to: 14380517    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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