Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         <---------ALFIN1                                      ------>MYB46(1)                                      -------->P                                      ------>MYB83                        --------->ANAC58        --------->ARR11(3)                          ---------                        --------->ANAC58        --------->ARR14(2)        ------->GAMYB   <<<<<<<<<<<            <-----------RAV1(1)       --------->ZAT14          ----------->GT1           --------->ANAC46 --------->GT1          --------->ANAC46       <---------CCA1(2) <---------YAB1   <---------------AtSPL8 ----ARR11(3)    <-------GAMYB--------->ARR14(2)<---------ARR14(2)     ----------->RAV1(1)>>>>>>>>>>> --->ARR11(3)   ----------->GT1     <---------MYB59          <---------GLK1(2)  --------->YAB1   cttgttatacatatatgtgggttaataagccatatatacctacactcacaaatcttgaatatagattgtgatacaacagcaatattagtacaaaccattg  14368500                                                --------->ARR11(3)                                  <---------AHL20(2)                                 --------->AHL20(1)                                 <---------AHL20(2)          <---------DAG2                                 --------->AHL20(2)       <---------ALFIN1                                 <---------AHL20(1)      --------->MYB46(3)                              --------->YAB1    <---------ARR11(3)                       >>>>>>>>>>WRKY38         <---------ARR11(1)         --------->AHL20(2) >ATHB12               >>>>>>>>>>WRKY26        <---------CCA1(2)   --------->YAB1 <<<<<<LFY             >>>>>>>>>>WRKY43    --------->TOE2(3) <----------DOF2 >>>>>>LFY           <---------WOX13(1) <-----------GT1<-----------GT1  ----------->GT1         -----   gatgctctacaatgttttgtctaattgaccaaaaataaaatttaacctcatatctttcaaccacttttttcataagattaaaaagttttgtcatatattc  14368600                   --------->STY1(2)                                                           <-----                   <---------STY1(2)                                                       <---------GLK1(2)                  ------>MYB46(1)                            <---------YAB1            <-------TEIL                  ------>MYB83                           --------->KAN4(2)            --------->CCA1(2)                <---------MYB59                         <----------TaMYB80           <---------ARR14(2)               -------->ZAP1                           ------->TEIL                  --------->ARR14(2)            ----------->HVH21                          <---------ARR14(2)         <---------ANAC46            --------->WRKY12                        --------->ANAC55(2)         ------->TEIL<--------            --------->WRKY38(1)                     <---------ANAC46            <---------ARR14(2)      <-----------GT1     <------MYB46(1)           <---------ANAC55(1)         --------->MYB52(1)   <---------AHL20(2)     <------MYB83              <---------ANAC55(2)         --------->ARR14(2)  --------->AHL20(2)     <---------TOE2(2)         <-------TEIL              --------->ANAC55(1)  <---------AHL20(1)     <---------TOE1(2)  <---------ARR14(2)               <---------ANAC55(2)  <---------AHL20(2)    <--------P          --------->ARR14(2)               <---------ANAC55(1) ---->TOE2(3)<---------WRKY18(1)        <---------LBD16--------->ARR14(2)    --------->ANAC55(2)   ttaatttttttcccttgacctagctagtaggttttctaaaatttcggatttgatacgtatattcttatagtttgctaatacgtatcggatacagcatctt  14368700                                                                  <-----------HVH21         ----------->RAV1(1)    --------->ICU4                   <---------bZIP60(1)       --------->DAG2 -----DOF2         <-----------GT1   <---------AHL20(2)          --------->bZIP60(1)------->TEIL   <- -ARR11(3)  ----------->GT1  <--------P                <-----------GT1    <---------ATHB12---------->DOF2   tgtgtatggtccaccagtaaattacatttgggtaagtatttgattttagttgatttttttccaacttatgtcacaaatcattcatgtatcaaaaaagttg  14368800                                                ---------->DOF2                                              <---------HSFB2a(2)                                              --------->HSFB2a(2)                                           --------------->AGL15                              <---------------AGL15                       ------->TEIL---------->DOF2                                   --------->GLK1(2)                   <---------TOE2(3)--------->DAG2       --------->AHL20(2)         <---------GLK1(2)                <---------YAB1--------------->AGL15      <---------AHL20(2)       ----------->ARR10             <---------YAB1  ==============================MADS_MADS     --------->DAG2      <-------          --------->AHL20(2) ----------------->AGL3     <---------AHL20(2)     <---------ANAC46------ ------TEIL<-----------GT1 <-----------GT1<---------ANAC46              ---------->DOF2 <----------DOF2   atacattgtcaatttactattaatgtatttatccatataaagtgacttctaaaagtattttaaatatacaaaaaaaaagtagcttagattctttttcatg  14368900                                                <----------DOF2                                                <---------------AGL15                         *TSS  --------->AHL20(2)                                                  --                       ----------->GT1------>ZmHOX2a(1)               --------->ZAT18       --------- --AtLEC2     <---------AHL20(2)  --------->ARR11(3)   <---------TOE2(3)                  --------->At4g35610 --->AtLEC2   --------->AHL20(2) --------->RVE1(1)     <---------YAB1 <---------ZAT14  --------->At4g35610   aaaaaatttcgaaaaattaaaaatgaagaaaaaaaaaatcctgccaactcctttattaagatggtaagagagagctctgagaagagagaagcagcaccaa  14369000        --------->ARR11(3)                                                                       ----        <---------ARR11(3)                                                                   <-------       <---------CCA1(2)                         --------->YAB1  <---------ARR11(3)          --------    <-------TEIL                          <-----------GT1        --------->ARR11(3)<----------DOF2--- ------->AHL20(2)   <----------DOF2 <---------MYB46(3) <---------ICU4<---------REM1(2)      --------- -->RAV1(1)    <----------DOF2      ----------->GT1    --------->ATHB12 --------->ANAC46 <----------DOF2   aaaaaattcatatctctctttcctttcaattttctcagttgttaaaacctctcatactcattagagagctcttcacgagagaactctttctctttcccat  14369100                                                                                      <-------TEIL                                               <-----------HVH21                --------->MYB52(1)                                               <-----------TGA1                --------->AtMYB61       --------->ARR11(3)                     --------->DEAR3(1)               ------->GAMYB       <---------ARR11(1)               <---------ICU4                         <---------ALFIN1      <---------CCA1(2)                 --------->YAB1                        <---------MYB55(2)   <------ZmHOX2a(2)                   <---------YAB1                         <---------MYB52(2)  <---------ARR11(3)                 --------->YAB1                          -------->P  --------->ARR11(3)                 <---------ICU4                         ------->GAMYB ----->AHL20(2)                     <---------YAB1      <-----------GT1    <---------MYB55(2) --------AGL15                    XXXXXXXXXXXXXXXXXXXX>MIR414              <---------MYB111(2) ------->AGL15                    --------->YAB1   <---------ANAC46        --------->MYB46(3)       - ------->DOF2     <<<<<<<<<TBF1   <---------ICU4<---------MYB52(1)--------->MYB46(3) <-----------HVH21 -------->AGL3 <<<<<<<<<TBF1--------->ANAC46  --------->ANAC46<---------ATHB12--------->MYB46(3)   <-   taaagatcaaatctttcttcttcttcatcaacaccatcatcatcatcaccgtcatgtgtaacccatcaacaacaacaacaaccaccggttcagagaacca  14369200                                                                                             ------>ZmHOX2a(1)                                                                                            <--------                                                                                            ---------                                                                                           <---------                                                                                           <---------                                                                                         ------>ZmHOX2a(2)                                                                                        --------->GLK1(1)                                                                    ------>NtERF2       <---------GLK1(1)                                                                    --------->LBD16     <------ZmHOX2a(2)                                                                   --------->ANAC46    --------->ARR14(3)                               <---------HSFB2a(2) ----------->RAV1(1)                 <---------ARR14(3)              --------->HSFB2a(1)                  <---------------AGL15               --------->ARR11(3)              <---------HSFB2a(1)                  --------------->AGL15               <---------ARR11(3)              --------->HSFC1(2)                   ==================================================              <---------HSFC1(2)   <------ZmHOX2a(2)              <---------LBD16      <-----------ARR10          --------->LBD16      --------->HSFB2a(2)----------------->AGL2               --------->ARR14(2)   <---------HSFB2a(2)   ------>ZmHOX2a(2)      ------->TEIL <---------GLK1(1)         <---------ARR14(2) -------->GLK1(2)   ======================HOX2a_HOX2a ---------->DOF2                 <------ZmHOX2a(1) --------GLK1(2)    ------>ZmHOX2a(1)      <----------DOF2   --------->GLK1(1)  <---------ZAT14   agaatctcgaaccggactcttcctcgatctcttctcgatcaatagctttgaacccacaaagagaaatctccggcattgtgagaacagaggatctcctctt  14369300                                                           <<<<<<<<<AtERF-3                                                           <<<<<<<<<AtERF-4                                                           <---------RAP2.3(1)                                                           ------>NtERF2                                                          <---------RAP2.3(2)                                                          <---------DEAR3(1)                                                          <---------RAP2.3(3)                                                          <---------RAP2.6(2)                                                         --------->RAP2.6(3)          --------->RAP2.6(2)          ----------->HVH21                      <------ZmHOX2a(2)                  <---------At4g35610         --------->At5g28300                     ============================HOX2a_HOX2a      --------->At4g35610                <---------DAG2 --------->MYB52(1)          --------->At4g35610     --------->GLK1(2)              <---------MYB52(1) ----------->TGA1      ------>MYB83   <---------At4g35610              --------->DOF5.7(2)----------->HVH21     ------>MYB46(1) -------AGL15                     --------->ANAC46    <-----------HVH21    --------->TOE2(2) ------>AGL15                     --------->ANAC58===========================HOX2a_HOX2a --------AGL1                     --------->ANAC58------>ZmHOX2a(2)   ------>ZmHOX2a(1)  <---------ARR11(1) --------AG                    <---------REM1(2)--------->ARR14(2) ---------->ID1 ---------->CDC5 =======MADS_MADS      <---------ARR11(3)<----------DOF2--------->REM1(2)  --------->AtMYB61   atggcagaagctgtaacagaggcgaaatctctcttcacgttagcttttccgatcgccgtgacggctcttgtcctctacctacgctcagccgtatcaatgt  14369400  Previous    Next  AGI:  At4g29140.1    Description:  MATE efflux protein-related. similar to MATE efflux protein-related [Arabidopsis thaliana] (TAIR:AT5G19700.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65441.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528) Range:  from: 14368925    to: 14370898    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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