Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          <---------ARR11(3)                                      <-----------GT1        --------->ARR11(3)                             --------->ANAC46       --------->CCA1(1)                               <---------ANAC55(2)       --------->RVE1(1)                               --------->ANAC55(2)               <------ZmHOX2a(2) ----------->RAV1(1)                                  <-------TEIL               --------->ARR14(2) -->HSFB2a(2)  <<<<<<<<<<<<<<<<<LFY                 <---------ARR14(2)           <---------ARR14(2) ---HSFB2a(2) --------->ANAC58                      --------->ARR14(2)          ------>MYB46(1) -HSFB2a(2)   --------->ANAC58                  ------>ZmHOX2a(2)               ------>MYB83   aacccacaaatatctcaagacaatggagacagagagaacaactacgatgatccatatacgtgatataatccattcccaaaccaaatactggatcaaatcc  14350500                                           <------ZmHOX2a(2)                                       <---------HSFB2a(2)                                       --------->HSFB2a(2)                   <------ZmHOX2a(2)  <---------LBD16           <---------ARR14(2)       --------->GLK1(2)           --------->ARR14(2)      <---------GLK1(2)          ------>MYB83            ------>MYB46(1)                       <----------DOF2          ------>MYB46(1)         ------>MYB83                      <----------DOF2                 -   caaacccaaaccaaatactggatcaaatcccaaaccaaattctggatcaaatcccaaacccaaaccatgtctttctttttcttctaaattttctcaaaac  14350600                                         <---------ANAC58                                  <---------YAB1                        <---------AHL20(2)                                           --------->ANAC58                        --------->AHL20(2) ----------->GT1                           --------->ANAC58                       --------->AHL20(2)<---------ANAC58                           <---------ZAT18   ----------->GT1 <---------ATHB12 <---------ANAC58          <-----------GT1       --------->ZAT18 --------->DOF2  --------->WOX13(1) <---------ANAC58      --------->YAB1     --------->ZAT6     <XXXX   atgaaaggttataaaacatctatcatttattttctcatgcttgccttgttaaatgcccattgattatctatcttcttcaccactagcacgcttgagccta  14350700                                                             <---------------AtSPL8                                                             --------------->AtSPL3                                                            <---------DOF5.7(2)                                                            ---------->DOF2                                                     ==================bZIP_DOF                                                     <---------O2                      <---------ATHB12               ==================bZIP_DOF                    ------>MYB83                     <---------bZIP60(1)                    ------>MYB46(1)                  --------->O2               ------>MYB46(1)                       --------->TGA1a               ------>MYB83                          --------->bZIP60(1)             ------->GAMYB                           <---------TGA1a             ==================================================MYC_MYB             <---------MYB59                      --------->ANAC46     <---------TOE2(3)          <--          <-----------GT1                         ----------->HVH21<----------DOF2    --------->LBD16 XXXXXXXXXXXXXXXXMIR867                <------ZmHOX2a(1)  --------->DOF5.7(2)     --------->DEAR3(1)   ataaaccaagtttaaccgaaccaaatcaattttctaaaccaggattacaaacccgacgtcgttaaagtactttgacgaaaaacacctccgaagaaactca  14350800                                                         <------ZmHOX2a(1)                                                    <---------ALFIN1                                                 --------->YAB1                                                --------->MYB46(3)                                                <---------ATHB12                                              --------->WOX13(1)                      <-----------GT1                                            ------------>CBF                    <---------MYB52(1)                                            <---------ATHB12    *TSS --------->O2   <---------GLK1(1)                --------->ANAC58          --------->WOX13(1)------------>CBF   --------->LBD16      <                --------->ANAC46   --------->HSFB2a(2)  --------->ANAC58     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   <---------YAB1     <----------DOF2  --------->GLK1(2)--------->ANAC46    ------>ZmHOX2a(1)      <- -------ICU4    --------->ANAC58   <---------HSFB2a(2)  --------->ANAC58  XXXXXXXXXXXXXXXXXXXXX>MIR4221   aaattacgatggtataccactcaactttcgataactactagaatccatcaatcaccacaggaaacaatgccacttctcctccgtcgatttccctctccct  14350900                                                               --------->ANAC58                                                               --------->ANAC58                                                               --------->ANAC46                                                             <-----------GT1                                                          --------->YAB1                                                      --------->ARR14(2)                        <----                                                  ------>ZmHOX2a(1)                           -------           ------>ZmHOX2a(1)     <---------ANAC58 --------->LBD16                             <------        ------>ZmHOX2a(1)        <---------ANAC58 <---------LBD16                        --------->ARR14(2)  <---------ATERF1(1)<-----------HVH21    --------->MYB46(3) <---------ICU4              <---------ARR14(2) ---------MYB52(1)  --------->ANAC46  ------>ZmHOX2a(1)  <---------AHL20(2)----------------->AGL2 --- ----------HVH21  ------>ZmHOX2a(1)  --------->TOE2(3)<---------ARR14(2)--------->MYB46(3) ------>ZmHOX2a(2)   ccgtcgtctcctccttcttcctccgtcgctcaatggcttcctcaacaatctcctcggatataatcactccatcaaacaccaaaatcggatggatcggaac  14351000                                          --------->ARR14(2)                                          <---------ARR14(2)                           --------->ANAC55(1)                           <---------ANAC55(2)                           --------->ANAC55(2)      <---------At5g28300                      --------->ZAT18    <-----------HVH21          <---------HSFC1(2) <-----------HVH21    <---------ZAT18    <-------GAMYB--------->DEAR3(1)    ---------->DOF2 -----LBD16        <---------ANAC46     ----------->GT1             --------->HSFC1(2)              < -->ARR14(2)       --------->ALFIN1  ------------>AtMYB77           --------->MYB46(3)              < ---ARR14(2) <---------ATHB12     ---------->DOF2  <---------WRKY38(1)      ========================= ------>LBD16<------ZmHOX2a(2)   --------->YAB1  <-----------HVH21  --------->HSFB2a(1)            <-   cggagtcatgggccgatcaatgtgtggacacttaatcaaagccggttacacagtcaccgtcttcaatcgaaccatctccaaagctcaaactctcatcgac  14351100               ------>NtERF2               <---------ATERF1(1)              --------->DEAR3(1)             --------->ATERF1(1)             <------NtERF2             --------->ORA47(2)                                                                  <---             --------->RAP2.3(1)                                                                 ----            <---------RAP2.3(1)                                                               =======            <---------ATERF1(1)                                                          --------->ANAC58            ------>NtERF2                                                                --------->bZIP60(2)           --------->DEAR3(1)                                                            <---------TGA1a           <---------DEAR3(1)                                                            --------->bZIP60(1)         <-----------HVH21                                                               <---------bZIP60(1)         <-----------TGA1                                                 ===========================        <---------TGA1a                                                   ------>ZmHOX2a(1)   ------>ZmHOX2a(1)        <---------O2                                               ================================MYC_MYB        --------->O2                                               <-------GAMYB         --------->TGA1a        --------->TGA1a                                           --------->MYB52(2)     --------->O2      <---------DOF5.7(2)                      <---------TGA1a    <---------MYB46(3)     --------->ANAC58      --------->MYB52(1)------>MYB83           <---------O2      <---------TOE1(2)       <---------ANAC55(2)   <---------At4g35610  ------>MYB46(1)        --------->O2      <---------TOE2(2)       --------->ANAC55(2)   --------->At4g35610<---------MYB111(2)      --------->TGA1a  <---------MYB52(1)       <---------O2   ----------->bZIP910(2)                      --------->bZIP60(1)<------MYB83           ============ ---------ANAC58      <---------MYB46(2)       ============================MYC_MYB       ============ ---------ANAC58     --------->ANAC46          <---------bZIP60(1)<------MYB46(1)     <---------MYB52(1) =================bZIP_DOF                  ----------->HVH21 --------->ATHB12      --------->ANAC46 ----------------------TaNAC69(2)--------->At4g35610    <-----------GT1<---------YAB1<-----------HVH21   atgggtgctaacgtcgccgactcaccaaactcagtcgctgaacaatccgacgtcgttttcaccatcgttggttatccttccgatgtccgtcacgtccttc  14351200           --------->LBD16         <---------LBD16    ---------->DOF2 <------ZmHOX2a(2) ------HSFB2a(2)<---------DAG2          --------->ALFIN1                                       <----- ----->HSFB2a(2)<----------DOF2 <---------WRKY12                                            --------- =======HOX2a_HOX2a            <---------MYB52(1)                            <---------At4g35610 =======HOX2a_HOX2a            --------->WRKY18(1)                           --------->At4g35610  --- ==============bZIP_DOF       <-----------HVH21                          <----------DOF2 --------->At4g35610 ==============bZIP_DOF      --------->ANAC46                 ----------->RAV1(2)  <------ZmHOX2a(1)   tcgatccaaagtccggagctttatctggtctccgtcaaggaggtgttctcgttgatatgactacttctgagccttctttagcagaggagatagctaaagc  14351300                                                --------->CCA1(2)                                          --------->ALFIN1                             <---------DEAR3(1)                                        --------->ZAT2                                <------NtERF2                                        --------->At4g35610          <---------At4g35610           --                                        <---------ZAT2               --------->At4g35610  --------->ALFIN1    <----------DOF2                   <-----------RAV1(2)           --------->ANAC58 --------->LBD16   --------->TOE2(3)              <-----------HVH21        <---------TOE2(3)       <---------LBD16<-- ----At4g35610                   ------>ZmHOX2a(1)     --------->At4g35610    <---------ARR14(2)  <-- ->DOF2 <---------TOE2(3)      ----------->RAV1(2)   <------ZmHOX2a(1)        --------->ARR14(2)  --- ------>At4g35610          --------->ANAC46    --------->ARR11(3)   --------->ANAC58--------->DEAR3(1)   tgcttcctttaagaattgtttctcaatagacgctcctgtctcaggtggagatttaggagctaagaatgggaagctatctatattcgccggaggtgatgaa  14351400  Previous    Next  AGI:  At4g29120.1    Description:  6-phosphogluconate dehydrogenase NAD-binding domain-containing protein. similar to 6-phosphogluconate dehydrogenase NAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G71180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65444.1); contains InterPro domain 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Dehydrogenase, multihelical; (InterPro:IPR013328); contains InterPro domain 6-phosphogluconate dehydrogenase, C-terminal-like; (InterPro:IPR008927); contains InterPro domain 6-phosphogluconate dehydrogenase, NAD Range:  from: 14350864    to: 14352065    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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