Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          --------->MYB46(3)                                <---------TOE1(1)            <---------At4g35610        ---------->DOF2                                    <---------ANAC46        <---------REM1(1)          --------->ANAC46                                     --------->ALFIN1      <---------At4g35610     ------>ZmHOX2a(1) <---------ZAT14              <---------DOF5.7(2)    <      --------->At4g35610    --------->TOE1(3)  --------->ZAT14            --------->DOF5.7(2)------>NtERF2 -------->ZAT2    --------->ARR11(3)  --------->ARR14(2)      --------->ETT(2)          --------->CCA1(2) ---------ZAT2    <---------ARR11(3)--------->LBD16   ---------->DOF2     --------->TOE2(3)   <------ -------->At4g35610          --------->TOE2(3) <----------DOF2<---------ETT(2)         <---------SPL7 ---------At4g35610         ----------------->AGL1  <---------ZAT6        <----------DOF2<-------TEIL ----DOF2   --------->At4g35610   <---------LBD16 <---------ANAC46<----------DOF2<---------LBD16    -   gaagctggagctgtagcagagctcttcttctccttaaccggaacagccggtttagtgaaagttgtcgactttccatctttaacgacggaggtacggggac  14324900            <---------bZIP60(1)            --------->bZIP60(1)          <---------DDF1          ------>NtERF2          <---------RAP2.6(3)         --------->RAP2.6(2)                                                                       <<         ----------->HVH21                                                                        <--         --------->DEAR3(1)            <------ZmHOX2a(1)                     <------NtERF2       ----         <---------ETT(1)            --------->LBD16                       <---------ANAC46    <-----         --------->RAP2.3(2)        <-----------RAV1(2)                    <---------DEAR3(1)  ------         --------->RAP2.3(3)        --------->HSFB2a(2)                  <-----------HVH21     <-----         --------->DREB2C(2)        <---------HSFB2a(2)                 <---------ANAC46       ------        --------->RAP2.3(1)         <---------LBD16                     <---------ANAC58       ------       --------->ZAT2              ------>ZmHOX2a(2)             <---------MYB52(1)    <----------DOF2 ---------ARR14(2)                <------ZmHOX2a(2)            ----------->GT1         ============== ---PCF5--------->DEAR3(2)       --------->ARR14(2)            <---------MYB46(3)     <---------DAG2 -------->ARR14(2)               <---------ARR14(2)   <---------MYB46(3)<---------ANAC58      ------>NtERF2   cagaacccgagccgacatcaccagtagcagtagtggatccaggagagaagacccatttgttagagtcgttaatagcgtcggagaacacccttttggcacc  14325000         <---------At4g35610    ----------->HVH21  <---------TGA1a  --------->ANAC58  <---------O2  --------->TGA1a  --------->O2  --------->ANAC58  --------->ANAC55(2)  <---------ANAC55(2)  --------->ANAC46                                              <---------LBD16 <---------LBD16                                       ------>NtERF2 <<<<<GRF7                                             <---------ATERF1(1) ---------HVH21                                       --------->DEAR3(1) ------->HVH21                                      <---------ATERF1(1) ----At4g35610                                      ------>NtERF2 --->ZAT2--------->At4g35610             --------->ZAT18      <---------ARR14(2) ----ZAT2<---------ZAT2                  <---------ZAT18      --------->ARR14(2) --->At4g35610                  --------->ARR11(3)  --------->LBD16 ----->RAV1(2)                  --------->GLK1(2)  <---------DEAR3(1)         <---------ZAT6 ===========bZIP_DOF           <---------GLK1(2)  <---------LBD16 --------->LBD16   tgacacgggacagctactcttgttgagagccaagaatcttgagtcgactcgctccggcgactcagaaccgggtaaaccgagtcttaactcggtagccttg  14325100                                                               <------MYB83                        --                                                               <------MYB46(1)                     <-                                                             <--------P                         -----                                                           --------->ATHB12                     -----                                                           <---------MYB46(3)                   <----                                                    <---------ANAC58                           <-----                                                    <---------ANAC58                    --------->YAB1                                               <---------REM1(1)                       --------->ICU4            <---------YAB1                     <-----------RAV1(1)                     <---------ATHB12         <---------MYB52(1)        <-----------HVH21<---------ANAC46           --------->TOE2(2)<----        <-------GAMYB       <---------AtMYB61  <---------MYB46(3)      ----------->HVH21<---------ICU4   aaattgagaccgttgttattgtctctggttttggttttgtcagacattgttgttgcttccatggttggaaactctgacaaacctatgtaatcatgctctg  14325200        <-------TEIL       --------->CCA1(2)      <---------ARR14(2)      --------->ARR14(2)           <---------ZAT18 ------->At4g35610          <---------YAB1 --------At4g35610          <---------AHL20(2)                                          <----------DOF2 ---->At4g35610            --------->AHL20(1)                                           <---------DAG2 ---->ZAT2                 <---------AHL20(1)                       ----------->GT1 <---------ZAT14 -----At4g35610            --------->AHL20(2)                     ---------->DOF2   --------->ZAT14 ------RAV1(1)            --------->YAB1                   --------->ATHB12<---------------AtSPL8 -----ZAT2       <---------AHL20(2)--------->ZAT18         <---------ICU4 ---------->DOF2          --   ctgctacagatacagacatttttttcaaatataattgtggacaaacttttgaagcatttagtgattacaaaagaaaaaaagaacagaacactttctgaga  14325300                                                                   --------->ALFIN1                             <------ZmHOX2a(2)                   --------->ALFIN1                    <---------TOE2(3)                            <---------ANAC46                   ---------->DOF2                            --------->DAG2                      <--                  --------->AHL20(2)                        ---------->DOF2                   -------             --------->AHL20(2)                        ----------->GT1                    <---------AHL20(2)             <---------AHL20(2)                        --------->YAB1                    <---------AHL20(2)            --------->AHL20(2)    *TSS                ----------->GT1               <---------AHL20(2) ------->CCA1(2)  <---------AHL20(2) <---------YAB1   --------->ICU4          <----------DOF2 <------   gaaatgggaaacaaaaaaatttaaagatgagatcaaattgtgagtgaaaatgagaaatgataaaaaggtgtgtgagagagctttatttttttttattttt  14325400                                                --------->ANAC58                                                --------->ANAC58                                             --------->ZAT18                                            --------->ALFIN1                                      --------->HSFB2a(2)                 <-------TEIL                                      <---------HSFB2a(2)           <---------AHL20(2)                                      --------------->AGL15        <---------AHL20(2)                                      <---------------AGL15        --------->AHL20(2)                                     ----------------->AGL1  --------->ANAC58                                     ----------------->AG    --------->ANAC58                                     <-----------------AGL2  --------->ANAC46                    ----                          ----------->GT1--------->DAG2      --------->ANAC55(1)                 <---  <----------DOF2         --------->YAB1---------->DOF2   <---------ARR14(2)              --------->YAB1 --------->TOE2(3)<---------ANAC58   ================================================================ ---------GT1     <---------ANAC58   <-----------------AGL1  --------->ANAC55(2)     --------->At5g28300 -->AHL20(2)      <---------ANAC46   ----------------->AGL2  <---------ANAC55(2)    --------->TOE2(3) ---AHL20(2)<----------DOF2     <---------AHL20(2)        --------->ARR14(2)        ----------->GT1   ttacctttaatcttcttttttcttggaatcgtattattttccaaaagtggacggaagtagtatacgtaattttatattcatataaaccgtaattagaagt  14325500                  <------NtERF2                 --------->LBD16                <---------ANAC46                <---------ANAC58                <---------ANAC58               <---------LBD16                                                              ---------               <<<<<<<<<E2Fd                                                              --------->REM1(2)               <<<<<<<<<E2Fc                                                           <---------ANAC46          <----------DOF2                                                         <---------ANAC55(1)        ------>ZmHOX2a(1)                                                         --------->ANAC55(2)       --------------->AGL15                                                      <---------ANAC55(2)       <---------------AGL15                                                      <---------ANAC58      <-----------------AGL2                                                      <---------ANAC46      ----------------->AGL1                                                   <---------MYB52(1)      ----------------->AG                                                   --------->ANAC46      <-----------------AGL3                                                 --------->ANAC55(2)      <-----------------AGL1                                                 --------->ANAC58   <----------DOF2----------->GT1                                  ----------->GT1<---------ANAC58 ----------->AtSPL8                                  <---------ZAT18         --------->ANAC58 ------------AtSPL8                              <---------------AtSPL8      --------->ANAC55(1) =======================MADS_MADS          <---------TOE2(3) ------->TEIL<-----------GT1 <---------ANAC46   aagtactttcctcttttggcgggtttaaacacaaaatgttgatttaagaaaatggtacacatgaatgtattgtatatacacgttacgttttgtgtagaca  14325600                   ---------->DOF2             ----------->HVH21            <-----------HVH21           --------->ANAC58           --------->bZIP60(2)           --------->ANAC58           <---------At4g35610       ------>NtERF2       <-----------HVH21       ----------->RAV1(1)      --------->ANAC46                                                                      <--------      <---------ETT(1)                     --------->YAB1                                <-----------GT1      ----------->HVH21     ------>ZmHOX2a(1)                                     <-----------GT1     --------->LBD16    --------->ZAT18 ------>ZmHOX2a(1)                ------->MYC3<----------DOF2 >ETT(2)   --------->At4g35610    <---------DAG2                         <-------MYC3<---------DAG2   tctactccccgacaggtcacagaaagcgtcctgaaacctttcctattatgcccttgtctcgactctcgtattccacgttttgttttactttttacttttg  14325700                                                  --------->AtLEC2                                                  --------->ANAC58                                                  --------->ANAC58                                                --------->YAB1                                          <---------YAB1                       <----------DOF2                                   <---------AtLEC2                      --------->ARR14(2)    <----- --DOF2                        --------->ALFIN1<---------ATHB12          <---------ARR14(2)    <-----   tatttgaaaaaaacaatttgctatctcatgaaggtgtgcatgttatgctatcatgcaaaacgatttagtatctaaaatacgcttttgtatgcaattcctt  14325800  Previous    Next  AGI:  At4g29080.1    Description:  PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2); transcription factor. Identical to Auxin-responsive protein IAA27 (IAA27) [Arabidopsis Thaliana] (GB:Q9ZSY8); similar to IAA9 (indoleacetic acid-induced protein 9), transcription factor [Arabidopsis thaliana] (TAIR:AT5G65670.2); similar to IAA8 (indoleacetic acid-induced protein 8) [Arabidopsis thaliana] (TAIR:AT2G22670.3); similar to IAA8 (indoleacetic acid-induced protein 8), transcription factor [Arabidopsis thaliana] (TAIR:AT2G22670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65490.1); contains InterPro domain AUX/IAA protein; (InterPro:IPR003311); contains InterPro domain Aux/I Range:  from: 14323367    to: 14325334    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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