Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                ------>ZmHOX2a(2)                                                                                             --------                                                                                             <-------                                                                                            ---------                                <-----------HVH21                                           <--------                        <---------YAB1                                                      ---------                     <---------YAB1                                                 <---------YAB1                   ----------->GT1      <---------GLK1(2)                         --------->ATHB12               ------>MYB46(1) --------->bZIP60(2)                               <---------YAB1 --->ANAC58    ------>MYB83<---------YAB1                            <---------At4g35610    <-------- --->ANAC58    -------->P <-----------GT1                  ------->TEIL     --------->REM1(1)<------ZmHOX2a(2)   ctattgatgtcaataccaacatggttattatccatgtcatcaaattcttgattttgaaatgtatcaaactcaactgctacaatatgattagagggatctc  14316500  <---------ANAC58  <---------ANAC58                                                   ----------->HVH21 ->GLK1(1)               --------->ARR11(3)                        --------->CCA1(2) --GLK1(1)               <---------ARR11(3)                  <---------MYB46(3) >ARR11(3)        --------->ZAT18                        <---------AtMYB61 -ARR14(2)   ---------->DOF2                       --------->ANAC58<---------At4g35610            <-- >ARR14(2)  <---------AHL20(2)                     --------->ANAC58--------->At4g35610            --- -ARR11(3)  --------->AHL20(2)     <------ZmHOX2a(1)   <----------DOF2             <-------TEIL   <--   cattgtttgtcaaattaaagagccctagatattgtgaggatgaactatagggcaagcctttggtgggagagatgacaaatgcaagtccatggccatcaag  14316600                                                            <---------AtMYB61                                                            <---------MYB46(3)                                                            --------->MYB46(2)      --------->TOE2(3)                                     --------->MYB55(2)                      -     --------->ZAT6                          --------->ANAC58<---------ANAC46                     ---    <---------YAB1                           --------->ANAC58<------MYB46(1)               --------->HSFB2a(2)    <---------TOE2(3)                   ---------->DOF2    <---------MYB55(1)              <---------HSFB2a(2) -----TEIL                   <---------TOE2(3)            <---------MYB52(1)  --------->MYB52(1)  <-- ------>ZAT18              ---------->DOF2   --------->ANAC46<------MYB83 ------->TEIL   <---------REM1(1) -------ZAT18   <---------ZAT14 --------->ALFIN1--------->MYB52(1) --------->ARR11(3)    ----------->GT1   tgcattaacattagagactatagcgaaaacaaaggtagtggagaaagacgaaacggtaccgtttggtgagttcttgaatctaactggagagttgtagaaa  14316700                                                                                       --------->MYB46(3)                                                                                       --------->ICU4                                                                                     <-----------GT1                                                                                  --------->ANAC58                                                                                  --------->ANAC58                                                                                  --------->ANAC46                                                                                  --------->ANAC55(1)                                        --------->ANAC58                     <---------SPL7                                        --------->ANAC58                    <---------ANAC58                                  <-------TEIL                              <---------ANAC58                               --------->At4g35610                          <---------ANAC46       -- ---------->HVH21              <---------At4g35610                         --------------->AtSPL8  -- ------>ANAC55(2)            <---------ZAT18<----------DOF2         --------->LBD16<---------MYB52(2) -------ANAC55(2)      ------->TEIL--------->REM1(1)    <---------ICU4     --------------->AtSPL3<---   acgtgaccatatgagaattcagacgaatttgtgagcttcatcaagcctttggagttagtaattgcaattccagagttgtcgtacaagtaaccattaaaac  14316800                                                    <-----------RAV1(2)                                   <---------HSFB2a(2)       ------>ZmHOX2a(1)      <-----------RAV1(1) ----------->RAV1(1)                   ------------>CBF ---->MYB46(1)        --------->DAG2            --------->At4g35610      --------->AHL20(2) ---->MYB83--------->ZAT14  <----------DOF2     <---------At4g35610      <---------AHL20(2)        <- ------MYB59         ---------->DOF2   ----------->ARR10                 <---------AHL20(1)    <-----   caaactctccttcttcactctgagaaagtgctttgttggagaagaattgcagcaccagaagaagcactagtacaaaaaatttcatcgttttgcaattctt  14316900                                                                         --------->CCA1(2)                                                                        <---------ARR11(3)                                 <---------------AGL15                  --------->ARR11(3)                                 <----------DOF2                        <---------AGP1                ------>ZmHOX2a(2)--------------->AGL15          <---------YAB1              <---------ARR11(3)<-----------------AGL3      --------->YAB1------>ZmHOX2a(2)        <---------YAB1          <-----------------AGL2     <---------YAB1<------ZmHOX2a(2)      --------->YAB1           ---------->ID1             --------->AHL20(2)                     <---   ------>ZmHOX2a(1) --------->YAB1                       <---------AHL20(2)                     <---   ====================HOX2a_HOX2a                       --------->YAB1 --------->AGP1           <--- ----------GT1--------->ARR11(3)<-----------------AGL1  <---------YAB1 --------->RVE1(1)         <--- -----DOF2   --------->YAB1   <-----------GT1        <---------YAB1 ---------->DOF2 <----------DOF2   ttttcctctcatgaatgatcttaccataagtttttctttttttggtcaaaaccatatgattataatatgaaaaagatctaaataggctttatctgtatga  14317000                                                                              --------->AHL20(2)                                                                             <---------------AGL15                                                                             <---------WOX13(1)                                                                           --------->ATHB12                                                                        <------------CBF                                                                      <---------YAB1    ----------->GT1                    <---------AHL20(2)        ------>NtERF2<---------AHL20(2) ------bZIP60(2)                       --------->AHL20(2)       --------->ANAC58 ------ANAC46                          --------->AHL20(1)       --------->ANAC58 ------ANAC58        <----------DOF2   <---------AHL20(1)       --------->ANAC46      --------->ARR11(3) ------ANAC58  ---------->DOF2      --------->YAB1              --------->DEAR3(1)  <---------TOE2(3)   cttggagggtcaaaaactaaagtcttttagactcttagtaataaaatgttgaataagtcttgttcgacgcctcttattgatttattaagaaattgaccag  14317100                                                                                              <------                                                                                       --------->ANAC58                                                                                       --------->ANAC58                                                                                      --------->SPL7                                                                                     <---------MYB52(1)                                 <---------ANAC46                                  --------->ANAC58         <------NtERF2         <---------LBD16                                     <---------ANAC55(2)  ---------->DOF2             <-----------RAV1(1)             --------->ATHB12     --------->ANAC58   catgaaaaggaggcattgctactatgtaatgtctgggggggagtttcacatcgatataggctattgatgggccttagtatgaagcccgtaagcccatatt  14317200                          ----------->GT1                     <------ZmHOX2a(1)     --------->At4g35610                  <------NtERF2     ------------>CBF                                             ----                  --------->ATERF1(1)      ----------->RAV1(2)                 --------->MYB46(3)----                  <-----------RAV1(2) --------->WOX13(1)      *TSS        ------>ZmHOX2a(1)      ---- ------CBF      <---------ANAC46---------->DOF2      --------->ICU4<---------CCA1(2)      -----------   gaagctcgagtcttgatggcgcaggagagagagaaaaagacaatcacctgtagtaatctttgaagactcttatctcctctatccaccaagagagggaaaa  14317300                                                                                      <-----------HVH21    --------->AHL20(2)                 --------->ARR14(2)                      <---------ANAC58   --------->YAB1                      <---------ARR14(2)                      <---------ANAC58 ----->ANAC58                         <------ZmHOX2a(1)                    <---------ANAC46 ----->ANAC58                       <---------TOE1(3)          ------>ZmHOX2a(1)<----------DOF2 ------->GT1         <----------ID1 <---------TOE2(3)  <---------ALFIN1    <---------ANAC58 >GT1        <-----------RAV1(2)  --------->CCA1(2)   --------->MYB46(3)   <---------ANAC58       ---   cgaaataaaaatagcacaggggagagacaaaatgagataaggatttgaagcctctcaccactctcctcgttttcgcttcgtgcttatttgtcaaacgcga  14317400  Previous    Next  AGI:  At4g29050.1    Description:  lectin protein kinase family protein. similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G70110.1); similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT2G43700.1); similar to lectin protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G70130.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15684.1); similar to lectin-like receptor kinase 7;2 [Medicago truncatula] (GB:AAR11299.1); contains InterPro domain Legume lectin, alpha; (InterPro:IPR000985); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); contains InterPro domain Prote Range:  from: 14314824    to: 14316885    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g29060.1    Description:  EMB2726 (EMBRYO DEFECTIVE 2726); translation elongation factor. similar to translation elongation factor Ts (EF-Ts), putative [Arabidopsis thaliana] (TAIR:AT4G11120.1); similar to Os12g0541500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066956.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ69965.1); contains InterPro domain Translation elongation factor EFTs/EF1B; (InterPro:IPR001816); contains InterPro domain UBA-like (InterPro:IPR009060); contains InterPro domain Translation elongation factor EFTs/EF1B, dimerisation; (InterPro:IPR014039); contains InterPro domain Ubiquitin-associated/translation elongat Range:  from: 14317262    to: 14321573    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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