Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  ----------->HVH21 --->At4g35610                                                            --------->LBD16 ----At4g35610                                                           --------->ANAC46 -NtERF2                               <---------ANAC58                 <---------HSFB2a(2)        -- >At4g35610                            <---------ANAC46                 <---------LBD16         ----- -At4g35610                            <---------ANAC58                 --------->HSFB2a(2)     ----- >ATERF1(1)                        ------->TEIL                        <---------ANAC46    <---------   ggcagaatgggaaactcttactgatgcaaaaactgtgtatgtcttgggattttggtttagacagttcaaattttcgcggaatgtgaccttgtattacacc  14293100                                                                                       ---------->DOF2                                                                                      <---------AHL20(2)                                                                                      --------->AHL20(2)                                                                                <---------ANAC58                                                                           <----------DOF2  --------->GLK1(2)                           ------------------------>ANAC81   --------->YAB1 <---------GLK1(2)                      --------->ZAT18                  <---------ZAT18 --------->ARR10                        <---------ZAT18      --------->ANAC58   <---------ANAC58 ---->TOE2(3)                       <---------ICU4------>MYB46(1)    <-----------RAV1(1)<---------TOE2(3) ---->TOE1(3)                      <---------MYB52(1)        --------->ANAC58<----------DOF2 --GT1                             --------->ICU4 ------>MYB83    --------->ICU4--------->ANAC55(2)   ttagattctttgttcttgttagcaaaactcttgtgccattagtgcaaaaaccaaacaaatgagaagcaattttggtgctctttcgtaattaaagaaacat  14293200                                                                     --------->ZAT18                                               <---------RAP2.6(2)   <---------ZAT18                                              --------->RAP2.6(3)   <---------ANAC58                                             --------->ARR14(2)     <---------ANAC58                                             <---------ARR14(2)    <-------TEIL <---------ZAT14   <--                                            <---------MYB52(1)  <---------HSFB2a(1)               <--                                          <---------ANAC58     --------->DAG2   --------->ZAT18   ---              --------->AHL20(2)          <---------ANAC58     <---------------AtSPL8             ---     <------NtERF2<-----------GT1 <-----------GT1  <---------SPL7 --------->ALFIN1      --------->ZAT18    --------->RAP2.6(2)         --------->KAN4(2)<---------At4g35610<---------ANAC46   <---------AtMYB61   ttagggccgaaacaaaaaatatacttcttcttaatattccccttccgtttcggcttccgcttgagaaggtgcgtactatgagttcacgagtggtctatct  14293300                                                                                      ---------->DOF2                                                                                 ----------->GT1                <---------ANAC46                                             <---------SPL7                <---------ANAC58                                          <---------AGP1  <----------ID1           --------->ATHB12                                               --------->ARR14(2)          <---------AHL20(2)                              --------->ARR14(2) ----------->HVH21 <-----------HVH21     --------->At4g35610---------->DOF2 <---------ARR14(2)------>ZmHOX2a(2) -------ANAC58  <---------ANAC58 --------->ANAC58        <---------GLK1(1)<---------ARR14(2) -------ANAC58 <---------MYB46(3)--------->ANAC46<----------DOF2<----------DOF2 <---------DEAR3(1) ------>ANAC55(2) ----------->HVH21      <---------AHL20(2)    <---------ANAC58<---------ORA47(1) ------>O2<---------YAB1         --------->ANAC58<---------DAG2<---------ANAC58--------->SPL7      --   acgtgtcagttttttattgggtgatagctaaatacacgcatattaaaagggctttttggatatttgcttcaccgtagatcggacggtggaaagagacaaa  14293400                                                                                <-----------HVH21                                                                              --------->MYB46(3)                                                                              <------------AtMYB77                                                     <---------TOE2(1)  --------->GLK1(2)                                                     <---------TOE1(1)  <-----------ARR10                                                    --------->SPL7      <---------ARR14(2)                                                  --------->TOE1(2)    --------->GLK1(1)                                                  <---------SPL7   --------->AtLEC2                                                --------------->AtSPL3 <---------CCA1(2)     --------                                              <---------ARR14(2)   --------->ANAC58    <---------AHL20(1)                                              <XXXXXXXXXXXXXXXXXXXXXMIR831    --------->DEAR3(2)   <-           <---------YAB1    <------ZmHOX2a(2)--------->ARR14(2)   --------->ANAC46    --------->AHL20(2)        --------->ICU4    <---------MYB46(3)--------->ANAC58       --------->ANAC58    --------->AHL20(1) ---------->DOF2         <---------TOE1(2)  --------->ANAC58 <---------WOX13(1)------->GAMYB <------- ------->TOE2(3)----------->HVH21       <-----------GT1     <------------CBF--------->MYB52(1)-------   acctaaagcatttatgaattgacatcgttggatcatcgtatttaacaagaaccgtacgatgagattgccacgcaaatctaaccgtcgaatataatccaga  14293500                                            <---------ANAC58                                            <---------ANAC46                                            <---------ANAC58      --------->MYB52(1)       --------->AHL20(2) ->HSFB2a(2)                             <---------AtMYB61  <----------ID1                 <---------AHL20(2) -----------CBF                    <------ZmHOX2a(1)      >>>>>>>>>TBF1        <---------AHL20(2) --HSFB2a(2)                    <------ZmHOX2a(1)      >>>>>>>>>TBF1   ---------->DOF2  <----------DOF2 -->LBD16          *TSS       --------->ALFIN1       ------------------------>ANAC81 ---------->ID1   aaattgaaatttcaaaacatgttagagagagggaggaggagagatggtgtgagagaagaagaagaacaaaaccgaaagtatttttttgtgcttttaattt  14293600                     ------>ZmHOX2a(1)                     <---------At4g35610                     ----------->RAV1(2)               ------>MYB46(1)               ------>MYB83                                        <<<<<<<<<TBF1             <---------MYB59                                    <<<<<<<<<TBF1          <-----------GT1               <<<<<<<<<TBF1        <<<<<<<<<TBF1    <---------AHL20(2)               <<<<<<<<<TBF1        <<<<<<<<<TBF1    --------->AHL20(2)            <<<<<<<<<TBF1        <<<<<<<<<TBF1                             ----   ttgtttttaattttaccaaattcctctgagggcttcttcttcttcttctccgtcttcttcttcttcttcttcttcgtttagagctaaaacccaatagaac  14293700                                                                                                <----                                                                                                -----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                              <------                                                                                             --------                                                       <------ZmHOX2a(2)                     --------                                                    --------->LBD16                          --------                                                   --------->ANAC46                          --------                                                  <---------LBD16                           <--------                                                 --------->ANAC46                           ---------                                              --------->ARR14(2)                           ------->GAMYB             --------->TOE2(3)                <---------ARR14(2)                          --------->MYB46(3)        --------->At4g35610 <----------DOF2<---------AHL20(2)                        --------->TOE2(3)        <---------At4g35610 <---------DAG2 --------->AHL20(2)  ---------->DOF2    <----------DOF2---- ----->TOE2(3)  ---------->DOF2 <-----------GT1--------->CCA1(2)                <---------At4g35610   cctaattctcatctcccttaaagcttatcccttttctctctctatatatatacgcggatcaaattcaaagtctcagtttttgagctttcttaacagccgc  14293800 --NtERF2                             ------>ZmHOX2a(2) ---->RAP2.3(1)                       ================================HOX2a_HOX2a ----ATERF1(1)                       =================================HOX2a_HOX2a >NtERF2                            --------->ARR14(2) --->LBD16                          --------->ARR11(3) --->At4g35610                      <---------AGP1 -->RAP2.3(2)                       <---------ARR14(2) -->ATERF1(2)                   <-------TEIL -->RAP2.3(3)                  --------->GLK1(2) -->DEAR3(1)                ----------->ARR10 -->RAP2.6(2)           --------->LBD16 >GAMYB                <---------ANAC46       <-----------GT1 ---ATERF1(2)         <---------LBD16<------ZmHOX2a(2) ->ATERF1(1)      --------->ANAC46 <---------CCA1(2) ->MYB46(3)     <<<<<<<<<<E2Fe --------->CCA1(2) ->ERF1         <<<<<<<<<<E2Fa --------->ARR14(1)              <------ZmHOX2a(1) ->RAP2.3(1)    <<<<<<<<<<E2Fd--------->ARR11(1)   <---------At4g35610                   --------->AHL20(2) -At4g35610     <<<<<<<<<<E2Fc<---------GLK1(2)    --------->ZAT2                  --------->At5g28300 >At4g35610   <-----------GT1 --------->ARR14(2)   <---------ZAT2               <---------LBD16 ----->DEAR3(1)<-----------GT1<---------ARR14(2)   --------->At4g35610---------->ID1     --------->YAB1   cgaatcgatttgtgattttcccgctccggagagattcggatctggatttttcgagctgatttgtaggaatttctcgttttctcgcggtgaattatatcaa  14293900                                                                                     <---------GLK1(1)                                                                                     <---------ARR14(2)                                                                                     --------->GLK1(1)                                                                                 <------NtERF2                                                                              <------ZmHOX2a(1)                                                                            --------->ALFIN1                                                                           <------NtERF2    >>>>>>>>>E2Fd                                                                         <---------DEAR3(1) >>>>>>>>>E2Fc                                                                         <---------ANAC46   ---------                                                                        --------->ATERF1(1)------>NtERF2                                                                        <---------LBD16    --------->LBD16                                                                        <------NtERF2--------->ARR14(2)                                                                       <---------ORA47(2) --------->ANAC58                                                                       <---------RAP2.3(1)<<<<<<<<<<E2Fa                                                              <---------ANAC46--------->ATERF1(1)                                                --------->GLK1(2)     <---------RAP2.3(2) --------->ANAC58         ----------->GT1                        <---------ARR11(3)    <---------RAP2.3(3) --------->ANAC46        ----------->GT1                         --------->ARR11(3)    <---------DEAR3(1) <---------LBD16      ---------->DOF2                      ----------->GT1   <---------MYB46(3)<---------DEAR3(1) ----------->GT1  <---------LBD16         ----------->GT1 --------->CCA1(2)--------->ATERF1(1)   ----   ctgtggaaaaaaggaaaatttctgggtttttttggttttggagattggaaaatctttgagagatgggtgaagacggcggaggaggcgaattcccgccaaa  14294000  Previous    Next  AGI:  At4g28990.1    Description:  RNA-binding protein-related. similar to unnamed protein product [Vitis vinifera] (GB:CAO65501.1); contains InterPro domain Zinc finger, RanBP2-type; (InterPro:IPR001876) Range:  from: 14291157    to: 14293180    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g29000.1    Description:  tesmin/TSO1-like CXC domain-containing protein. similar to tesmin/TSO1-like CXC domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G20110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65502.1); contains InterPro domain Tesmin/TSO1-like, CXC (InterPro:IPR005172) Range:  from: 14293519    to: 14297072    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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