Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100    <---------YAB1 ---------ICU4 -------->YAB1 ------->ICU4                     --------->At4g35610  --------->AHL20(2)     <---------AHL20(2) -----AHL20(2)               --------->YAB1            <---------AHL20(2)    <---------AHL20(2) -->ANAC55(2)             ----------->GT1<------ZmHOX2a(2)                   --------->AHL20(2)  <---   aattatcaaggtcaatacgagaacaatatagtaataagctccgatctataggtatattaaaattttcaaacttgagtaattaaatcgaatagtattgtag  14240400                                                                             <---------ICU4                                                         --------->ANAC58    --------->YAB1                                                         --------->ANAC46    --------->ATHB12                                                   --------->YAB1            -------->ATHB1                                                  <---------YAB1 --------->ARR11(3)                                                 --------->AHL20(1)          <--------ATHB1                                                 --------->AHL20(2)         <---------YAB1                                                 <---------AHL20(2)         --------->ICU4                                                 <---------AHL20(1)   <---------ZAT18     <---------AHL20(2)                                                --------->YAB1   --------->AHL20(1)   <---------AHL20(2)                                               <---------YAB1    <---------AHL20(1)   --------->AHL20(2)                                              --------->AHL20(2)--------->YAB1    <---------YAB1                                       <---------YAB1    <----------ID1     <---------ATHB12                                 --------->AHL20(2)--------->AHL20(2) --------->ZAT18--------->ICU4 ------ZAT6                 ----------->GT1--------->YAB1--------->ANAC58------------>ATHB5      <---   tcttggaagtcatacaagaccgaagaaaaaatgaaaaaaatacgataatattataatatacgacaaaaatattgcacaatcattgtaattaataaatgtt  14240500                            --------->MYB52(1)       ------->TEIL           --------->AHL20(2)          <---------ARR11(3)             --------->GLK1(2)           <---------AHL20(2)          --------->ARR11(3)           <---------HSFC1(2)             --       --------->ICU4  --------->AHL20(2)      ------->TEIL         --------->HSFC1(2)     --------->GLK1(2) ------AHL20(2)----------->GT1      --------->AHL20(2)      --------->ALFIN1   <---------GLK1(1)  ---   ttatttgtcagaattaattgtgaaatcaaataagggcataaaatctatgtatgtgtatgtgtgtgtgggaagtatctaatgaaatctggacacaatctga  14240600                           <-----------GT1                 --------->ARR11(3)                           --------->YAB1                  <---------ARR11(3)        ---------->DOF2                     --------->YAB1                       --------->RVE1(1)  --------->AHL20(2)                     ------>ZmHOX2a(2)       <---------RVE1(1)           ----------->GT1              <-----------GT1               <---------ARR11(3)         ---------->DOF2           <---------MYB46(3)               <---------GLK1(2)  <----------DOF2    --------->AHL20(2) ------->TOE1(2)   <---------ARR11(3)       --------->ARR11(3) ------>ZmHOX2a(1) --------->AHL20(2) --->ZmHOX2a(2)    --------->ARR11(3)   ---------->DOF2 --------->AHL20(2)----------->GT1     -------   tccagcgaggcagtagttactgatcttaataacaaaacataaaaaagatttttaaaaaaaaaatccttttttaaaaagataaaataaaaaagcttataaa  14240700                                 <---------At4g35610                                 --------->ZAT2                  ------>ZmHOX2a(2)                  ===================HOX2a_HOX2a                 ====================HOX2a_HOX2a               --------->ANAC58                 --------->GLK1(1)                       ----------->RAV1(1)                 <---------GLK1(1)                       <---------ALFIN1                 <------ZmHOX2a(2)         --------->ANAC58    --------->ANAC58                --------->ARR11(3)         --------->ANAC58<---------ALFIN1                       <--                <---------ARR11(3)   ---------->DOF2   ------->GAMYB                      <------MYB83       <---------YAB1            --------->At4g35610  --------->ANAC46                    <---------ANAC46    <------ZmHOX2a(2)         ------>ZmHOX2a(1)      ------>MYB83--------->ANAC46  <------------CBF    =================================HOX2a_HOX2a     ------>MYB46(1)  ----------->GT1<-----------RAV1(1)   <---------ARR11(3)        --------->TOE2(3)       -------->P--------->ANAC46 ------------>CBF<----   --------->ARR11(3)     --------->ARR14(2)       --------->AtMYB61  <----------ID1 <---------MYB46(3) --->DOF2      <---------GLK1(1) <---------ZAT2   --------->MYB46(3)--------->MYB52(1)    <------MYB46(1)   gaagagatcaccattagagatctcttcgattcctcagctcaaagctagccaaaccaaccccacacacacaaaacgaaaaaaaaacaattgttgggttttt  14240800                 <-----------GT1            <---------ARR11(3)                                                               --------            <---------GLK1(2)         <---------YAB1                                         <-------            --------->ARR14(3)      --------->ATHB12                                         --------            <---------ARR14(3)      <---------ICU4                                      --------->LBD16            --------->ARR14(2)     <---------YAB1     <---------ANAC46                 <---------HSFB2a(2)   *TSS   ----------->ARR10<---------ARR11(3)       --------->LBD16 --------->CCA1(2)  --------->HSFB2a(2) ---------GT1  <-----------GT1     --------->ICU4 <---------LBD16--------->ANAC58     <---------LBD16 -------GT1 --------->ARR11(3)<----------DOF2   <-----------GT1  --------->ANAC58    <---------LBD16   tctctctctagcaagattttctctctctagttctttgattattagtattttttccggtgtataaaccaagaaatgggtagtagttttttcgggagaccaa  14240900             <-----------TGA1         ------>ZmHOX2a(2)        <---------GLK1(1)       --------->ARR14(2)       <---------ARR11(3)       <-----------ARR10       --------->ARR11(3)       <---------ARR14(2)       <---------AGP1       <---------ARR11(3)      <---------CCA1(2)     --------->ARR11(3)     <---------MYB46(3)   ------>MYB83        ------>NtERF2     ----------->ARR10    ------>MYB46(1)     --------->LBD16                           --------->At4g35610    --------->ALFIN1     ----------->RAV1(1) --------->ANAC46                           <---------At4g35610  <---------ANAC46--------->YAB1             <---------ETT(1)                          --------->ANAC46 --------->AGL3   <---------ICU4            <---------LBD16                      --------->ANAC58 ----------AGL3  --------->ICU4       <<<<<<<<<TBF1                              --------->ANAC58 --------->AGL2  <---------YAB1    <<<<<<<<<TBF1 ---------->DOF2            ----------->HVH21   aaatgggtggatcttcgtcatcatcaccaacatcttcttcttcttctccggcaaagagagggaagaacaagaatggttctgacaagcctaagcagcctca  14241000                   <<<<<<<<<MYB1                   <<<<<<<<<MYB2               --------->LBD16            --------->DEAR3(1)                                         -------->P            <---------ANAC46                                           ------>MYB46(1)           --------->ATERF1(1)                                         ------>MYB83           <------NtERF2                                              --------->MYB55(1)          <-----------HVH21                                          <---------MYB46(2)          <---------ATERF1(1)                                        <---------MYB111(1)          ------>NtERF2                                              --------->AtMYB61         --------->DEAR3(1)                 ----------->GT1          <---------MYB111(2)         <---------DEAR3(1)            --------->ANAC46              <---------MYB59        <------NtERF2                 <---------LBD16    --------->MYB46(3)      <---------DEAR3(1)            <---------REM1(2)  ----------->RAV1(1)        --------->YAB1   --  --------->ARR11(3)  <---------HSFB2a(2) <---------ANAC46 --------->At4g35610   <---------YAB1   <--   gagaggtctcggcgtcgcgcagttagagaagattagattacacggcgagtataactgcaacagcttcaatacctacccttcttatcatccctcaacttat  14241100                                        --------->AtLEC2                                     <-------TEIL                                    <------ZmHOX2a(2)                                   --------->AGP1                                   --------->ARR11(3)                         <---------ARR11(3)  <-------TEIL           --------->ARR11(3)                                       <---------GLK1(2) --------->GT1          <---------CCA1(2)                                --------->AHL20(2) -------------AtSPL8 <-------TEIL  <---------ARR11(3)      --------->ICU4<---------AHL20(2)   caggtacaaatttcactcacatatacatatctctatagatccatgtaaaaatagtctagtagtaattgttttttataaattttagaatttcatcaaaaaa  14241200                                   --------->ATHB12                                  <---------YAB1                                --------->YAB1                                <------ZmHOX2a(1)                        --------->ZAT6                                ====================================HOX2a_HOX2a                      ----------->HVH21                                --------->MYB52(1)                    <---------ANAC58                                 <---------MYB59                    <---------ANAC58                           <---------YAB1                  <---------At5g28300                        ------>ZmHOX2a(2)  <---------AHL20(2)          --------->GLK1(2)   <---------TOE2(3)      <----------DOF2--------->At4g35610         <---------GLK1(2)    <---------TOE1(3)   <-----------GT1   <---------At4g35610   actctggtttagaatctttctaccgtgacattaaggatgatttggatgcaattttctttttgatcgtgatagctaactgtatttttttttgtctgtgttt  14241300  Previous    Next  AGI:  At4g28840.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G20080.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65485.1) Range:  from: 14240803    to: 14242617    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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