Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                                  ---                                                                                                  ---                                                                                                 ----                                                                                                <----                                                                                               ------                                                                                            ---------                                 ------->TEIL                 <----------DOF2               <--------                            <-----------GT1                  --------->TOE2(3)              <--------                        <---------DAG2                <---------ARR11(3)        -------->P  --------- --------->ANAC58       <----------DOF2               --------->ARR11(3)      --------->MYB46(3)===== --------->ANAC46   ------>ZmHOX2a(1)             ---------->DOF2    ------->TEIL ------->GAMYB------ --------->ANAC58   ==================================HOX2a_HOX2a    --------->ARR14(2)  <---------At4g35610 -------ATHB12     <---------MYB59             <------ZmHOX2a(2)     --------->ARR11(3)  --------->At4g35610 ---->WOX13(1)  --------->ARR14(2)            <---------ARR11(3)    <---------CCA1(2) <---------ATHB12 ->TOE2(3)      <---------ARR14(2)      ---------->DOF2    -------->P<---------ARR14(2)--------->YAB1   atcaaggaactaattccaaatcctaactttttacgaatttcataaagagatcaaaagaacttacctttgtgtatcttgaaacaacccaatgagcagctgc  14232100     ----------->RAV1(1)  --------->ANAC58  --------->ANAC58  --------->ANAC46 ------>ANAC46 ------>ANAC58 ------>ANAC58                                               --------->ANAC58 ----->ATERF1(2)                                             --------->ANAC58 -------RAV1(2)                                         <---------YAB1 --->At4g35610                                        <---------ICU4 >At4g35610                                           --------->YAB1 -ZAT2                                               --------->ICU4 -At4g35610                                    --------->ANAC58 >ZAT2          --------->ANAC58   --------->YAB1    <---------ATHB12                      --------->CCA1(2) ================RAV         --------->YAB1    --------->ANAC46         --------->TOE2(2) <----------ID1 --->ZAT2       --------->ANAC58---------->DOF2--------->ANAC58---------->DOF2  ---------->DOF2   aggcaagccacagaaaccaagtaagagacaatgacaaagatgacttaacaagccaatgatgaaacgaaagaaaacctatgtaaaaagagagagagacgaa  14232200                                                                 <---------TOE2(2)                                                                 <---------TOE1(2)                                                          --------->ARR14(2)                                                          <---------ARR14(2)                                                        <---------TOE1(2)                --------->ANAC58                        <---------TOE2(2)                --------->ANAC58                    --------->HSFB2a(2)           <------ZmHOX2a(1)              --------->CCA1(2)--------->GLK1(1)         <---------TOE2(3)<------ZmHOX2a(1)         <---------HSFB2a(2)            <------ZmHOX2a(1)   gaacacttactaaggaacaagacaagaaggacacttgtatttggatacaaccttctcgcagatttcgcatgtttgagtagctcgaggacacatctctcac  14232300                                                   <------NtERF2                                                   ------------>CBF                                                  --------->ANAC58                                           <---------ATHB12                              ----------->GT1     --------->ANAC58                       --------->LBD16 ------------>CBF                                     ---------                      <---------LBD16 --------->TOE1(3)                                ---------->DOF2           *TSS    --------->GLK1(2)  --------->TOE2(3)   <---------ANAC46         ---------->DOF2        ------->GAMYB<-----------RAV1(2) --------->WOX13(1)     --------->ZAT6 ---------->DOF2   tctctcacaacgagcacagcgattcaggggaagagaaaaacctcaatcaaggaggcaatggggtttacacttgcctcttcagaaagaaagaaagcccaat  14232400                                                                                                 ----                                                                                      <------NtERF2                                                                                     --------->LBD16                                                                                    <---------ANAC46                                                                                    --------->DEAR3(1)                                                                                   <---------LBD16              <---------AHL20(2)                                                   <------NtERF2-----             <---------AHL20(2)    <---------LBD16      <----------DOF2          --------->DEAR3(1)    ---------->DOF2             <-----------HVH21   *TSS<---------DAG2          <---------ABI4(2)<---  ----------->HVH21        --------->ATHB12<---------DAG2            <---------At5g28300     <------- --->CBF <----------DOF2<------------CBF   <----------DOF2          <-----------GT1--------->ATERF1(1)   gggcctgaaagcttttttatttatgtcattgatttgtcacggaggctttttgactctgctttttgtgaattcactgttgagaagcgccggagaagatgaa  14232500                            ===========================HOX2a_HOX2a                            ------>ZmHOX2a(2)                          --------->ARR11(3)                      <---------ANAC58                      <------MYB46(1)                      <------MYB83               <---------ANAC58     --------->WOX13(1)   <---------ARR11(3)                       --------->YAB1  --------->ANAC58    <---------ANAC46                            <---------YAB1  --------->ANAC58   --------->MYB55(2)                        <---------AHL20(1)              <----- ----->At4g35610     <---------MYB46(3)                ----------->GT1   <----------DOF2  --------->ATHB12 -->TEIL--------->YAB1<---------ANAC58           ---------->DOF2 --------->AHL20(1)     <---------WOX13(1) ------At4g35610 <---------MYB46(3)             ------>ZmHOX2a(1)--------->AHL20(2)   --------->ATHB12 --REM1(1)     <---------ANAC58               --------->YAB1   --------->AHL20(1)  ---------->DOF2   gctgaagcaattagaaggcttgttgggtgatcttgaacagttctccaatcctaaagtatgtgaaaaatattataactttgaatactaaagattgatttcg  14232600                                    <-------PIF5                                    ------->PIF5                                   <------MYB83                                   <------MYB46(1)                                   --------->ZAT2                                   <---------ZAT2                                   --------->At4g35610                                   <---------At4g35610           ------>ZmHOX2a(1)                                  --------->MYB55(2)     <---------ZAT2                                  <---------MYB46(3)     ----------->RAV1(2)                                  --------->MYB111(1)    --------->ZAT2                                 <-----------RAV1(2)    ------>MYB46(1)                           <--                              ----------->HVH21         ------>MYB83                         --------                            <---------ANAC58            --------->MYB52(1)                  XXXXXXXXX                  <---------YAB1 <---------ANAC46     <---------MYB59                <----------DOF2         <----------DOF2    <---------ANAC58         --------->ANAC58        --------->HSFB2a(2)  ---  --------->MYB46(3)        =================RAV     --------->ANAC46    <---------ANAC58   --------- ----ANAC46 <---------YAB1  <-----------RAV1(1)      --------->ANAC58    <---------ANAC58<-----------GT1   tcgaacaaactcttttgattttgattttttgtgtggcaggtggaattcgagcaatacccaactggtcctcacattgcttctcgtatgcttttcactgtaa  14232700                                                                <---------ZAT14                                                                --------->ZAT14                                                       <---------O2                                                       <---------bZIP60(2)                                                       <---------ANAC46                                                       <---------TGA1a                                                     <---------ZAT14                                                     --------->ZAT14            --------->ZAT14            <---------ARR11(3)  <------MYB83         ------>ZmHOX2a(1)             --------->ARR11(3)  <------MYB46(1)                     ------ -------ARR14(2)                ----------->GT1     ----------->HVH21                      --------->ANAC58 ->At5g28300<---------ZAT14  ====================================bZIP_DOF                  --------->ANAC58 XXXXXXXXXXX>MIR842          <----------DOF2  <----------DOF2   <---------REM1(2)      <-----------GT1 ------>ARR14(2)          <-----------GT1     ===================bZIP_DOF          <---------ARR11(3) -->GT1  <---------At4g35610<---------YAB1 <---------YAB1--------->ALFIN1          --------->AHL20(1)   aatccgtcttcctctgctctgaagtttattacttttgttaatatcatgctttctgtgaagtgggtcttcactgtctaatctagaatatataacaggctag  14232800                                                                                                   <-                                                                   --------->At4g35610             --                                                                   <---------ZAT2                 ---                                                       <------MYB83--------->ZAT2              ------                                                       <------MYB46(1)                         ------                                                    <---------ANAC58                           <-----                                                    <---------ANAC58                --------->TOE1(3)           --------->ALFIN1                        --------->ATHB12<---------At4g35610        <------ ----->GT1 <---------ANAC46<---------TOE2(3)      <---------YAB1  ------>ZmHOX2a(1) --------->TOE2(3)   tgattttctcagtgtgtggatgttagatttatgtagtctgagttgttttgtgatgcttggttttgttcctgctgtcttagaagaagccttaagtgtgtat  14232900                                                           <---------MYB46(3)                                                         <---------ANAC58                                                         <---------ANAC58                                                        <---------MYB46(3)                                                       <---------TOE2(3)                                                   <---------GLK1(2)                            -----                                                   <---------ARR14(2)                           <----                                                   --------->ARR14(2)                           -----                                                 --------->LBD16                      <---------At4g35610                                                <---------ANAC46                      <---------ZAT2                                                <---------ANAC58                      --------->At4g35610                                            <-------GAMYB<-------GAMYB               <-----------RAV1(1) ---------DOF2                             <---------MYB46(3)                      --------->At4g35610 ---->ZmHOX2a(1)                           <---------DEAR3(1)                      <---------At4g35610 ------>TOE2(3)                            --------->MYB52(2)<---------RAP2.6(2)  <-----------RAV1(1) ->TEIL                                --------->DAG2  <---------YAB1          --------->ALFIN1 <---- --->ARR14(2)               --------->CCA1(2)   --------->ANAC55(2)            <-----------RAV1(1) ----ARR14(2)              <---------ARR11(3)   <---------ANAC58         <----------DOF2 <---------At4g35610 ---CCA1(2)<------NtERF2   --------->ARR11(3)  <---------LBD16     --------->ALFIN1<---------ZAT2   cctttgtttaggcagagaattcatatggagatataactgataaggtcgttgcggattttggttgtggctgtggtactttaagtgctgctgctgctcttct  14233000  Previous    Next  AGI:  At4g28820.1    Description:  zinc finger (HIT type) family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO63788.1); contains InterPro domain Zinc finger, HIT-type (InterPro:IPR007529) Range:  from: 14230701    to: 14232311    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g28830.1    Description:  methyltransferase. similar to unnamed protein product [Vitis vinifera] (GB:CAO65488.1); contains InterPro domain Methyltransferase type 11; (InterPro:IPR013216) Range:  from: 14232452    to: 14234048    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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