Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         --------->ATHB12       --------->AHL20(2)      <-----------GT1                  --------->ARR11(3)       <---------ANAC55(2)   <---------MYB46(3)            ----------->GT1               <-------TEIL   <-----------------AGL1        --------->TOE2(3)                --------->CCA1(2) ------>ZmHOX2a(1)  --------->TOE2(3)   <---------YAB1    --------->ARR14(2)<---------------AGL15    --------->YAB1---- --------->RAV1(1)<---------ARR11(3)    <---------ARR14(2)--------------->AGL15    --------->AHL20(2) --ALFIN1 ---------->DOF2          --------->MYB52(1)    <-----------------AG     <---------ATHB12   tcaacataaacctaaagtaaaatcttcattgaaaacaaaacagatacataaaatactcttcctctattggttatacaatctgcaatgaaattagcaattc  14231900                                         --------->MYB52(1)               <---------At4g35610    --------->ANAC58                                            <--     <---------O2        --------->AHL20(2)                                                     -----     --------->O2        <---------AHL20(2)          --------->YAB1     <---------TOE1(3)    -------- <-----------HVH21 ----------->GT1    --------->ANAC58              <----------DOF2     <---------MYB52(2) ------>DOF2  <---------TOE1(3)       --------->ANAC46  ---------->DOF2 <---------TOE2(3) --------->MYB52(1)   aaaggtcacgaggtttaagctaagtaataaaactagagacactcaacgaattcaattacaaagtccaaaactttaaggtctaactcagaaactaacatca  14232000                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                 ----                                                                                                =====                                                                                               ------                                                                                            ---------                                 ------->TEIL                 <----------DOF2               <--------                            <-----------GT1                  --------->TOE2(3)              <--------                        <---------DAG2                --------->ARR11(3)        -------->P  --------- --------->ANAC46       <----------DOF2               <---------ARR11(3)      --------->MYB46(3)<---- --------->ANAC58   ==================================HOX2a_HOX2a    --------->ARR14(2)  <---------At4g35610 --------->ANAC58   ------>ZmHOX2a(1)             ---------->DOF2    --------->ARR11(3)  --------->At4g35610 -------ATHB12     <---------MYB59             <------ZmHOX2a(2)     <---------ARR14(2)--------->YAB1 ---->WOX13(1)  --------->ARR14(2)            <---------ARR11(3)    <---------CCA1(2) <---------ATHB12 ->TOE2(3)      <---------ARR14(2)      ---------->DOF2    -------->P------->TEIL ------->GAMYB------   atcaaggaactaattccaaatcctaactttttacgaatttcataaagagatcaaaagaacttacctttgtgtatcttgaaacaacccaatgagcagctgc  14232100     ----------->RAV1(1)  --------->ANAC58  --------->ANAC46  --------->ANAC58 ------>ANAC46 ------>ANAC58 ------>ANAC58                                               --------->ANAC58 ----->ATERF1(2)                                             --------->ANAC58 ================RAV                                    <---------YAB1 --->At4g35610                                        --------->YAB1 >ZAT2                                                <---------ICU4 -At4g35610                                          --------->ICU4 -ZAT2                                         --------->ANAC58 >At4g35610                  --------->YAB1    --------->ANAC58                            --------->CCA1(2) -------RAV1(2) --------->ANAC58   --------->YAB1    <---------ATHB12   --------->TOE2(2) <----------ID1 --->ZAT2       --------->ANAC58---------->DOF2--------->ANAC46---------->DOF2  ---------->DOF2   aggcaagccacagaaaccaagtaagagacaatgacaaagatgacttaacaagccaatgatgaaacgaaagaaaacctatgtaaaaagagagagagacgaa  14232200                                                                 <---------TOE2(2)                                                                 <---------TOE1(2)                                                          --------->ARR14(2)                                                          <---------ARR14(2)                                                        <---------TOE2(2)                --------->ANAC58                        <---------TOE1(2)                --------->ANAC58                    <---------HSFB2a(2)           <------ZmHOX2a(1)              --------->CCA1(2)--------->GLK1(1)         <---------TOE2(3)<------ZmHOX2a(1)         --------->HSFB2a(2)            <------ZmHOX2a(1)   gaacacttactaaggaacaagacaagaaggacacttgtatttggatacaaccttctcgcagatttcgcatgtttgagtagctcgaggacacatctctcac  14232300                                                   <------NtERF2                                                   ------------>CBF                                                  --------->ANAC58                                           <---------ATHB12                              ----------->GT1     --------->ANAC58                       --------->LBD16 ------------>CBF                                     ---------                      <---------LBD16 --------->TOE1(3)                                ---------->DOF2           *TSS    --------->GLK1(2)  --------->TOE2(3)   <---------ANAC46         ---------->DOF2        ------->GAMYB<-----------RAV1(2) --------->WOX13(1)     --------->ZAT6 ---------->DOF2   tctctcacaacgagcacagcgattcaggggaagagaaaaacctcaatcaaggaggcaatggggtttacacttgcctcttcagaaagaaagaaagcccaat  14232400                                                                                                 <---                                                                                      <------NtERF2                                                                                     --------->LBD16                                                                                    <---------ANAC46                                                                                    --------->DEAR3(1)                                                                                   --------->ATERF1(1)              <---------AHL20(2)                                                   <---------LBD16             <---------AHL20(2)    <---------LBD16      <---------DAG2           --------->DEAR3(1)    ---------->DOF2             <-----------HVH21   *TSS<----------DOF2         <---------ABI4(2)----  ----------->HVH21        --------->ATHB12<---------DAG2            <---------At5g28300     <------- --->CBF <----------DOF2<------------CBF   <----------DOF2          <-----------GT1<------NtERF2-----   gggcctgaaagcttttttatttatgtcattgatttgtcacggaggctttttgactctgctttttgtgaattcactgttgagaagcgccggagaagatgaa  14232500                            ------>ZmHOX2a(2)                            ===========================HOX2a_HOX2a                          --------->ARR11(3)                      <---------ANAC58                      <------MYB83                      <---------ANAC46               <---------ANAC58     --------->WOX13(1)   <---------ARR11(3)                       --------->YAB1  --------->ANAC58    <------MYB46(1)                             <---------YAB1  --------->ANAC58   <---------MYB46(3)                        --------->AHL20(1)              <----- ------At4g35610     --------->MYB55(2)                ----------->GT1   <----------DOF2  --------->ATHB12 ----->At4g35610 <---------MYB46(3)              ---------->DOF2 --------->AHL20(1)     <---------WOX13(1) --REM1(1)     <---------ANAC58                 ------>ZmHOX2a(1)--------->AHL20(2)   --------->ATHB12 -->TEIL--------->YAB1<---------ANAC58        --------->YAB1   <---------AHL20(1)  ---------->DOF2   gctgaagcaattagaaggcttgttgggtgatcttgaacagttctccaatcctaaagtatgtgaaaaatattataactttgaatactaaagattgatttcg  14232600                                    ------->PIF5                                    <-------PIF5                                   <------MYB46(1)                                   --------->ZAT2                                   <------MYB83                                   --------->At4g35610                                   <---------ZAT2                                   <---------At4g35610           ------>ZmHOX2a(1)                                  --------->MYB55(2)     <---------ZAT2                                  --------->MYB111(1)    ----------->RAV1(2)                                  <---------MYB46(3)     --------->ZAT2                                 <---------ANAC46       ------>MYB46(1)                           <--                              ----------->HVH21         ------>MYB83                         --------                            <-----------RAV1(1)         --------->MYB52(1)                  ---------                  <---------YAB1 <-----------RAV1(2)  <---------MYB59                <----------DOF2         <----------DOF2    =================RAV     --------->ANAC58        --------->HSFB2a(2)  ---  --------->MYB46(3)        <---------ANAC58         --------->ANAC46    <---------ANAC58   XXXXXXXXX ----ANAC46 <---------YAB1  <---------ANAC58         --------->ANAC58    <---------ANAC58<-----------GT1   tcgaacaaactcttttgattttgattttttgtgtggcaggtggaattcgagcaatacccaactggtcctcacattgcttctcgtatgcttttcactgtaa  14232700                                                                <---------ZAT14                                                                --------->ZAT14                                                       <---------O2                                                       <---------TGA1a                                                       <---------bZIP60(2)                                                       <---------ANAC46                                                     <---------ZAT14                                                     --------->ZAT14            <---------ZAT14            --------->ARR11(3)  <------MYB83         <---------At4g35610           <---------ARR11(3)  <------MYB46(1)                     ------ -------ARR14(2)                ----------->GT1     ----------->HVH21                      --------->ANAC58 ->At5g28300--------->ZAT14  <----------DOF2  ===================bZIP_DOF                  --------->ANAC58 -->GT1  ------>ZmHOX2a(1)   ====================================bZIP_DOF              <-----------GT1 ------>ARR14(2)            <---------YAB1    <----------DOF2   <---------REM1(2)  --------->AHL20(1) XXXXXXXXXXX>MIR842       <-----------GT1  <---------YAB1--------->ALFIN1          <---------ARR11(3)   aatccgtcttcctctgctctgaagtttattacttttgttaatatcatgctttctgtgaagtgggtcttcactgtctaatctagaatatataacaggctag  14232800  Previous    Next  AGI:  At4g28820.1    Description:  zinc finger (HIT type) family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO63788.1); contains InterPro domain Zinc finger, HIT-type (InterPro:IPR007529) Range:  from: 14230701    to: 14232311    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g28830.1    Description:  methyltransferase. similar to unnamed protein product [Vitis vinifera] (GB:CAO65488.1); contains InterPro domain Methyltransferase type 11; (InterPro:IPR013216) Range:  from: 14232452    to: 14234048    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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