Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 <---------ARR14(2)                                            --------->MYB46(3)                                            --------->AtMYB61                                           ----------->RAV1(2)                                          ----------->RAV1(1)                                         <---------ALFIN1              --------->MYB52(1)         --------->AtMYB61          ---------->DOF2               --------->MYB46(3)        ------>ZmHOX2a(2)             <---------ALFIN1       <------ZmHOX2a(2)              --------->ANAC46                           --------->ARR14(2)       --------->CCA1(2)          --------->GLK1(1)                              <---------GLK1(2)      <---------ARR14(2)         <---------ARR11(1)                 --------->ANAC58      --------->ARR11(3)         ------->TEIL  --------->ARR14(2)   --------->ANAC55(2)      <---------ARR11(3)         --------->GLK1(2)                  <---------ANAC55(2)      --------->ARR14(2)         <-----------ARR10                  --------->ANAC58      <-----------ARR10          --------->ARR14(2)              <---------ARR14(2)      --------->AGP1             <---------ARR14(2)              --------->ARR14(2)          --------      <---------AGP1            <---------CCA1(2)              --------->ANAC46  <---------ARR14(2)  <------ZmHOX2a(1)             <---------ARR14(1)         <---------GLK1(1)  ------>ZmHOX2a(2)------  =============HOX2a_HOX2a      <---------GLK1(2)  --------->LBD16  --------->ANAC46    ---------->DOF2   agcaggaagatctaaagaacggagattgaaacccgaatctccaccaccagacccgagaacgatacccgatacgaaatcgatcggattcttcaaagaatca  14213300                                                                   --------->At4g35610                                                                   <---------At4g35610                                                                <------NtERF2                     <---------AHL20(2)                     ------>NtERF2                 -------->ATHB1                             --------->MYB52(1)                 <---------ICU4                          --------->At4g35610                 --------->ATHB12                        <---------ZAT2                       -------                 <--------ATHB1                          <---------At4g35610          --------->MYB52(1)                 --------->ATHB51                        --------->ZAT2              <---------WRKY45                <---------ATHB51                        ------->TEIL                 <---------WRKY12                <---------ATHB12                --------->LBD16 --------->ATERF1(1)  <---------WRKY38(1)                <---------YAB1                <---------LBD16  <---------SPL7       --------->WRKY18(1)                --------->ICU4              --------->GLK1(2)<---------LBD16       <-----------HVH21-         <---------ARR11(3)                 <---------ARR14(2) --------->LBD16  --------->ALFIN1   -- ->GLK1(2) ------>ZmHOX2a(2)                --------->ARR14(2)<---------ANAC46 <------ZmHOX2a(1)   <- --->YAB1--------->ARR11(3)          --------->YAB1  <---------REM1(1) ----------->HVH21 ------->GAMYB   gaaacactgttgatctcaattattgaattagagaaggaataagaagaatccggtgatgaagctgccggaggctgagacggaggagggtcaacgggaacgt  14213400                                                                                   --------->GLK1(2)                                                                                   <-----------ARR10                                                                            ------>ZmHOX2a(2)                                                                           <------ZmHOX2a(2)                                                                          <---------ARR14(2)                                                                          --------->ARR14(3)                                                                          <---------ARR11(3)                                                                          --------->ARR11(3)                                                                          --------->ARR14(2)            ------>ZmHOX2a(2)                                             --------->GLK1(2) -->ANAC55(2)                          <---------WOX13(1)                 <---------ARR14(3) -------->ATHB12                     --------->ATHB12                    <------ZmHOX2a(1) ------->ICU4                       <---------YAB1                     <---------TOE2(3)           <- --------YAB1                       --------->ICU4   ---------->DOF2   <---------TOE1(3)  <---------MYB52(2)   gatgattgtattgatcgagcatccaaatcgagtagattatgattgatataccgatgaaagcttggagaaaattaaggatcttgagaatcgaagcgaacga  14213500                                                                         --------->DEAR3(1)                                                                      ------>ZmHOX2a(2)                                                                     <------ZmHOX2a(2)                <---------ANAC46   --------->GLK1(2)             --------->At4g35610        <--------               ---------->ID1     <---------GLK1(2)           --------->ZAT2                ---------       --------->MYB46(3)     --------->YAB1                  --------->At4g35610          <---------YAB1     ----------->RAV1(1)<-----------GT1                       <---------ZAT2             --------->YAB1 --------O2  <-----------RAV1(1)<---------YAB1                <---------At4g35610     <----------DOF2   gacatggcaacaattgtgtcgcattttttctatcacgattcttgatatcgaaatcaaacttctgagcagcgatcgccgaaggaagagtctttgatgattt  14213600                                                             --------->DOF5.7(2)                                                            --------->TOE2(3)                                                           --------->YAB1                                                           --------->ATHB12                                                           <---------ICU4                                                           <--------HAHB4                                                          --------->ICU4<---------AHL20(1)                                             --------->At4g35610        --------->AHL20(2)                                             <---------At4g35610<---------TOE2(3)                   -                                             <---------HSFC1(2)--------->MYB52(1)                 <--                                   --------->ARR11(3)     <---------ATHB12                   --------                                   <---------ARR11(3)   --------->WOX13(1)   *TSS--------->MYB52(1)--                                <------ZmHOX2a(1)      --------->AHL20(2)   --------->AHL20(2)  <----                            --------->ARR14(2)         <---------AHL20(2)   <---------AHL20(2) ------    --------->MYB52(1)      <---------ARR14(2)      <---------ICU4      --------->AHL20(1)  <-------- -ICU4 ----------->GT1 >>>>>>>>>WRKY18       --------->HSFC1(2)<---------DOF5.7(2)<---------TOE2(3)<- >ATHB12              ----------->HVH21   --------->LBD16 <---------YAB1<---------AHL20(2) <---------   cggacaaaacagaaaaatgttgttttgacagataggatatattccgaagcttactaattaatcattaacgaaaatttattaattaacgaaaattttcatt  14213700    <---------TOE2(3) <---------YAB1 -------->TOE2(3) -------YAB1 ->YAB1 ------->YAB1 -----ICU4                                                                                   <------- --->ICU4                                                                             <-----------RAV1(2) -YAB1                                                                              <-----------HVH21 -------HAHB4                          ------>NtERF2                   <---------AHL20(2) ---------->DOF2 --GT1                 <---------YAB1 <----------ID1                  --------->AHL20(2) <------ZmHOX2a(1)   atcattaatgtaatagttcaaaattttgatatagttgatgaggccaaacaaactaaatgggctagaattcgaataaatgggcttagggtcaggaaagctc  14213800                                                                                                   <-                                                                                                  <--                                                                                             --------                                                   <---------TOE2(3)                      <-------TEIL                                                   <---------TOE2(2)                  --------->DAG2                                                  <-----------RAV1(2)        --------->ALFIN1<-------                                          --------->ALFIN1   <---------RVE1(1)        <--------------                                        <---------ANAC46     <---------CCA1(1)        <--------------                                     ----------->HVH21      <---------ARR11(3)      ---------->DOF2-- --At4g35610  --------->ANAC46     --------->ANAC55(2)      --------->ARR11(3)  --------->AtLEC2  ---   attgtgaagagacttcccgcttcagaagttcaagttcaagtgatggggggactcaggttagagatatttgagacttgaagtgatgcaaaaggtacagctc  14213900  --------->ATHB12 <---------YAB1 --------->ICU4 --------ICU4         <---------ICU4 -------YAB1         <---------YAB1      <---------YAB1 ->At4g35610       --------->YAB1     <---------YAB1 --At4g35610      <---------YAB1      --------->ICU4       <-------MYC3 -AtSPL3        --------->YAB1      --------->YAB1         ------->MYC3             --------->CCA1(2) -AtSPL8       --------->ICU4      <---------YAB1        ------->TEIL          ---------->DOF2 ------->YAB1  <---------YAB1   ------->TEIL      <---------ANAC55(2)--------->At4g35610 ------>ICU4<---------YAB1   <---------YAB1       <---------TOE2(3)  <---------At4g35610   --------->MYB46(3)   atgatgattgtattgtgatgatgataatggtatgaatatgatgatgagaattaagtatgcatgtgaatgttagatgactgaaaaagatagacaaccactt  14214000                                                                               <---------AHL20(2)                                                                               --------->AHL20(2)                                                                    <-------TEIL            ----------->RAV1(1)                                     <---------ZAT14           --------->MYB46(3)                                       --------->ZAT18          ------>MYB83                                              <---------ZAT18          ------>MYB46(1)                                        <---------ANAC58        ------->GAMYB                                            <---------ANAC58                   -       <---------MYB55(2)                                       <---------------AtSPL8              <       --------->MYB46(3)                                       --------------->AtSPL8              -      -------->P                                     --------->ATHB12--------->ZAT6          <-------     --------->MYB52(1)        <----------DOF2       <---------AHL20(2)    --------->ICU4    --------   <---------MYB52(2)        ------>ZmHOX2a(1)      <---------AHL20(2)    <---------TOE2(3)<--------- <-----------GT1        <----------DOF2          <---------AHL20(2) --------->ZAT14       <----------   atataactaaccaacaacattttaggctttcctctttctctctctctgtttttatttattgatttttgggtacactaatgtttaaatctgtctctttaat  14214100                   <<<<<<<<<GATA-1                   <<<<<<<<<GATA-3                   <<<<<<<<<GATA-4                   <---------GLK1(1) <---------RAP2.6(2)------>ZmHOX2a(2) -------->RAP2.6(3)<------ZmHOX2a(2) ---------ORA47(1) <<<<<<<<<GATA-2 -------->SPL7    <---------AGP1 --AHL20(2)       <---------ARR11(3)        <-----------GT1                       ---------->ID1  --- ->AHL20(2)       --------->ARR11(3)      --------->AHL20(2)                    <-----------RAV1(1) -DOF2           <---------CCA1(2)       <---------ATHB12               <---------ANAC46 ---------->ID1 -------AGL3 --------->TOE2(3)     <-----------GT1                  <-----------HVH21   <-----------GT1   tggacggcctagcattcttagatctctcgatactgttttaccaataaaaccatattcagaggtgtcattttgtcatgtgtatttgttgtttttccccatg  14214200  Previous    Next  AGI:  At4g28770.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G20230.1); similar to unknown [Populus trichocarpa] (GB:ABK93408.1); similar to unknown [Populus trichocarpa] (GB:ABK93560.1); contains InterPro domain CD9/CD37/CD63 antigen; (InterPro:IPR000301) Range:  from: 14211930    to: 14213677    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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