Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <---------ANAC58                          ------->MYC2                          <-------MYC3                          ------->MYC3                          <-------MYC2       --------->TGA2(2)  ------->PIF5      <-----------HVH21   <-------PIF5      <-----------TGA1    ------->MYC4     ==================bZIP_DOF    ------>ZmHOX2a(1)     --------->TGA1a     <---------TGA1a    --------->PCF2     --------->bZIP60(2) --------->PIF3(3)  <---------TCP20     --------->ANAC58    <---------O2       --------->PCF5     --------->O2        --------->TGA1a  <------MYB83     <---------O2        --------->O2     <---------DEAR3(2)     --------->ANAC58    <---------PIF3(3)<---------MYB46(3)     --------->ANAC46    ====================================bZIP_DOF    <-----------STF1     --------->ANAC46 <------MYB46(1)<-----------GT1 ---ANAC58             <---------ALFIN1  <---------TOE1(2)                --------->YAB1 ---ANAC58           <-----------------PIF3(1)    ---------->DOF2        --------->MYB46(3) ---ANAC46  <----------DOF2   <---------ANAC58 ----------->RAV1(1)     --------->WOX13(1) -------------->TaNAC69(2)<-------MYC4  <---------MYB52(1)             --------->YAB1 --PIF3(1)  =======================bZIP_DOF <---------TCP15(1)        --------->MYB46(3)           <-   ccattccacgtcatctttttcttccccacgtggcttcctctcgttggtcccacaaagaatcacccttcttcaacaatcaccatcgttgctccctaattcc  14192200                                                               <-------GAMYB                                                              <---------DEAR3(2)                                                              <------MYB83                                                              ----------->GT1                       <                                                              <------MYB46(1)                    <---                                          --------->YAB1     --------->MYB46(2)                  <---                                          ----------->GT1    <---------MYB46(3)           --------->ANAC46                                      <---------YAB1         <---------DEAR3(1)           <---------ANAC55(2)                                    <-----------GT1          --------->MYB111(1)          --------->ANAC58                         --------->AHL20(2)                 <---------ORA47(1)            --------->ANAC58                         <---------AHL20(2)      --------->ANAC46                         --------->ANAC55(2)          --------->HSFB2a(2) --------->TOE2(3)  --------->ANAC58                         --------->ANAC55(1) --------ALFIN1--------->MYB46(3)<---------ICU4  --------->ANAC58             <---------GLK1(1) <----   atcacttcccttctctaaccaaaacatttatttcttaattactatagtaacacacaaaaatggtcggtagaaaaatttgtatttcccaatacacgtaata  14192300                                               <-----------HVH21                                              ------->GAMYB          <-----------HVH21                   --------->ANAC46                <---------AHL20(2)        ---------->ID1<-----------GT1  --------->ZAT18                     --------->AHL20(2)       < <-----------GT1     <---------YAB1    <---------ZAT18                    --------->AHL20(2)   ------ ---------YAB1     <---------ICU4     <---------ZAT6                  --------->AHL20(2)       ------ ------YAB1   --------->ANAC58    <---------YAB1            <---------MYB52(1)--------->AHL20(2)  --- ------AHL20(2) --------->YAB1  <-----------GT1<-----------TGA1  <---------DAG2<---------ICU4  ------ -----AHL20(1)--------->ANAC58 <---------YAB1--------->MYB46(3)  <----------DOF2       --------->REM1(1)   ttattacttcgtcgtcaagcattatcactgtttattactagtgctcaaccgtcacaaaccccattagctttttaaaataaaaaattactacaactctaag  14192400                                                                    <---------AHL20(2)                                                                    --------->AHL20(1)                                                                   --------->AHL20(2)                                                                   <---------AHL20(2)                                                                   --------->YAB1                                                                  <---------YAB1                                                                --------->YAB1                                                               --------->ICU4                                                               <---------YAB1                                     --------->AHL20(2)       <---------AHL20(2)                                     <---------AHL20(2)       <---------AHL20(1)                                 --------->AHL20(2)           --------->AHL20(2)                                <---------AHL20(2)           --------->YAB1                            --------->AHL20(2)              <---------YAB1                 <---------ARR11(3)                           <---------YAB1                 <---------ICU4                  --------->RVE1(1) --------->YAB1          --------->YAB1                  <---------YAB1                   --------->CCA1(1) ---------ATHB12         <---------ICU4                  --------->ICU4               --------->AHL20(2) --->ANAC46             --------->ICU4                 <---------ICU4    <---------AHL20(2)--------->ARR11(3) --->ANAC58             <---------YAB1                <---------YAB1--------->AHL20(2)<---------AHL20(2) ------>WOX13(1)     <---------MYB52(1)        <---------GLK1(2)<---------ICU4----------->GT1     <-- --->ANAC58  --------->ARR14(2) --------->AHL20(2)    --------->ICU4<---------AHL20(1)--------->AHL20(1)   caatcatactcacaaaatactctgttattattatttaaaataaatatcagaagctcatgattattataattatattatatgagtaaaataaaatatcgtc  14192500                            ------>ZmHOX2a(2)                           --------->GLK1(1)                     <-------MYC3                     ------->MYC3                    --------->TGA1a                    --------->O2                    =================================bZIP_DOF                    <---------PIF3(3)                    <---------O2                    <---------TGA1a                  <---------ALFIN1                  ----------->RAV1(1)                ------->GAMYB               --------->ANAC46           ---------->DOF2               --------->ANAC58        ----------->TBP       <---------ARR11(3)  <---------GLK1(1)       <---------AHL20(1)  <------ZmHOX2a(2)          --------->MYB46(3)       --------->AHL20(1) <---------ARR11(3)        <-----------GT1       --------->ARR11(3) --------->ARR11(3)   <------------CBF ----------->GT1==============MYC_MYB<---------------AGL15            <---------ICU4 -------ANAC46 --------->ANAC58      --------------->AGL15           <-------TEIL        *TSS   gagtggaaaaatattcaacgccacatgggatctcttcttctatataaagcattgtaacctccaaacaaatattcattccaaattcaaaaccatttccaat  14192600                                                                     ---------->DOF2                                                                   <---------YAB1                                                                <---------------AGL15                                                                --------------->AGL15            ----                                                                --------->ICU4                   <---                                                               --------->ANAC55(2)               ----          <---------GLK1(2)                            <----------DOF2<---------TOE2(3)     ---------        <---------ATHB12                     <---------GLK1(2) <---------ANAC55(2)   ---------->DOF2   acaacttccattgattctctctctctctctctctactaaaactttcaaattctcttactttcaatacttattaaagaaacttataaaaaaagaatggaga  14192700                                                                                                    <                                                                                                    -                                                                                                    <                                                                   <---------WRKY12                 <                                                                   <---------WRKY38(1)              <                                                           ------->GAMYB                           --                                                           ----------->HVH21           <---------DEAR3(1)                                                          --------->MYB46(3)          <---------MYB52(1)                                                        --------->MYB52(1)   <---------At4g35610   <-                                                       <---------WRKY38(1)   --------->ZAT2        <-                          <------ZmHOX2a(1)            <---------WRKY12      <---------ZAT2        <-            <---------WOX13(1)                         <---------WRKY45    <------NtERF2    <--------P     <---------ANAC58 <------ZmHOX2a(2)      --------->ABI4(2)    --------->WRKY18(1)<-----------HVH21     <---------ANAC46<XXXXXXXXXXXXXXXXXXXXMIR869.1    --------->WRKY18(1)<---------DEAR3(1)<-------GAMYB     <---------ANAC58<---------ARR11(3)      <-------TEIL<---------At4g35610 --------->At4g35610  --- ----->ARR14(2)      --------->ARR11(3)--------->MYB52(1)--------->At4g35610<---------ARR14(2)  ----- ------ARR14(2) =================HOX2a_HOX2a <---------ZAT18 --------->MYB52(1)  <---------WRKY18(1)< ----->GLK1(2)  <------ZmHOX2a(2)     <-----------GT1<-----------HVH21 <-----------HVH21 <------NtERF2 -->GT1  <---------MYB46(3)    <-----------GT1 <----------DOF2   <-----------HVH21 --------->DEAR3(2)   atatgtttcgtttgatggatcaagatcaggatttaactaataaccggtgcatttgggtcaacggaccggtcatcgtcggagctggaccgtcggggttagc  14192800         ---------->ID1     <---------ANAC58     <---------ANAC46     <---------ANAC58    <------NtERF2   <---------DEAR3(2)   <---------RAP2.3(1)   ------>NtERF2  <---------RAP2.3(2)  <---------RAP2.3(3)  <---------RAP2.6(2)  <---------DEAR3(1) --------->ATERF1(1) <------NtERF2 ---------RRTF1(1) ----->NtERF2 ---------RAP2.3(1) ---------ATERF1(1)                      --------->HSFB2a(2) ---------DEAR4(2)                       <---------HSFB2a(2)                                      --- ------->O2                        <---------MYB52(1)                                      ========== --------DEAR3(1)             <----------DOF2                                              ------>ZmHOX2a(2) --------RAP2.3(2)           <---------ANAC58                                             =========== --------O2                  <---------ANAC58                                             <------ZmHOX2a(2) ------>ATERF1(1)       --------->HSFB2a(1)                   <---------ANAC58      --------->TOE1(2) ------>HVH21           <---------HSFB2a(1)                   <---------ANAC58    ------->TEIL    --- ---------ERF1 --------->AtLEC2   <-------GAMYB  <---------At4g35610   ----------->GT1 <---------YAB1   gacggcggcttgtctccatgaacaaaacgttcctttcgttgttctcgagagagcagattgtattgcttctctatggcaaaaacgtacttacgatcgtctc  14192900                                                                   --------->ANAC46           ------>ZmHOX2a(1)                                       ----------->HVH21        ------>MYB46(1)                                    --------->LBD16        ------>MYB83                                      --------->LBD16   <---------ALFIN1                                       --------->ANAC46   --------->REM1(1)                                     <---------HSFB2a(2) ------>ANAC58                                           <---------LBD16        <---------At4g35610 =================HOX2a_HOX2a      ---------->DOF2       --------->HSFB2a(2)<-----------HVH21 =================HOX2a_HOX2a--------->MYB52(1)    <------ZmHOX2a(1)        <-----------TGA1 ------>ANAC58           --------->WOX13(1)  ----------->RAV1(2)  --------->MYB46(3)   aagcttcaccttcctaagcagttttgtcaattaccgaaaatgcccttccctgaggacttcccggagtacccgacgaagcgtcagttcatcgactaccttg  14193000                                                     <---------ZAT14                                                     <---------ZAT2                                              <---------At4g35610                                              --------->At4g35610                                              --------->ZAT14                                              <---------ZAT18                      <---------ANAC46                                              --------->ZAT18                      <---------ANAC58                 --------->HSFB2a(2)          <---------ZAT14                      <---------ANAC58<-          <---------LBD16                   --------->ZAT18                   --------->ALFIN1   ----        -------->P        ------->GAMYB    <---------ANAC58                 <---------ANAC58     <---    --------->ANAC58    -------->P<---------WRKY12   --------->ZAT2         <---------ANAC46    -----    --------->ANAC46 <------ZmHOX2a(2)     <---------ANAC58                 <---------ANAC58  <------    --------->ANAC58<---------ARR11(3)     --------->ALFIN1         >>>>>>>>>>>>>>>>>LFY      <------ <---------SPL7  <---------HSFB2a(2)     --------->ALFIN1<---------DEAR3(2)<-----------------------TaNAC69(2)   agtcttacgctacccggttcgagatcaaccctaagttcaacgagtgtgtgcagactgctcggttcgatgagaccagtggcttgtggcgagtcaagaccgt  14193100  Previous    Next  AGI:  At4g28720.1    Description:  flavin-containing monooxygenase family protein / FMO family protein. similar to SUPER1/YUCCA5 (SUPPRESSOR OF ER1), monooxygenase [Arabidopsis thaliana] (TAIR:AT5G43890.1); similar to flavin-containing monooxygenase family protein / FMO family protein [Arabidopsis thaliana] (TAIR:AT1G04180.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83595.1); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027); contains InterPro domain Flavin-containing monooxygenase FMO; (InterPro:IPR000960); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; (InterP Range:  from: 14192589    to: 14194262    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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