Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              --------->YAB1                                    <------                                           <---------ATHB12                                  <-------                                          ------>MYB83                                       <-------            --------->GLK1(2)             ------>MYB46(1)                                    --------        --------->YAB1                   --------->WOX13(1)                   <----------DOF2-------- ---------AHL20(2)                    -------->P                             --------->TOE2(3)<------ ------->AHL20(2)                    <-----------GT1                         <---------DAG2 --------- ---->YAB1--------->ICU4            <---------MYB111(1)           ----------->GT1       <---------WRKY45 ---->AHL20(2)                <-----------GT1     <---------AHL20(2)      <-----------GT1---------->DOF2   ataaaatttgtcataatctaatccagtggtatttactacttaccaatcagaatttatcaattgaaagaatgtaaattaacctttttgtagtcaaagatat  14161300                                  <---------ALFIN1        --------->YAB1                                  --------->ANAC46       <---------ATHB51 ---RVE1(1)                    --------->ZAT14           <---------YAB1 --ARR11(3)                    <---------ZAT18      <------ZmHOX2a(1) --AHL20(1)                    --------->ZAT18    --------->MYB59  <---------ALFIN1 ->AHL20(1)             <---------ICU4       <---------TOE2(3)     --------->ANAC46    <---------LBD16 ->ARR11(3)            --------->ICU4        <---------TOE1(3)  <---------ZAT18   ------->TEIL ---CCA1(1)          --------->YAB1        <---------AHL20(2)   --------->ZAT18<---------ANAC55(2) >YAB1               --------->AHL20(2)   <---------AHL20(2)    --------->ZAT14--------->ANAC55(2) <-   ttgttcccaaaaacaaaaactaataaaaattagtccacacattttttaatgttaggacaattatagtccacacattacaaaacgtatttttcggaaaata  14161400            <----------DOF2         <---------AHL20(2)                                                                   -------     --------->AHL20(2)                                          ------>MYB83                 -------     <---------AHL20(2)                                          ------------>CBF             -------    --------->AHL20(2)                 <---------TOE2(3)         ------>MYB46(1)            ---------    <---------AHL20(2)          <-------TEIL                    ----------->RAV1(1)         <--------    <---------AHL20(1)      <---------------AtSPL3  ---------->DOF2--------->YAB1          <---------GLK1(2)    --------->AHL20(1)   ----------->GT1 <------ZmHOX2a(1)  --------->ZAT6          <-----------HVH21 --------AHL20(2)      --------->At4g35610  <------ZmHOX2a(1)  --------->AtMYB61------------>MYB.PH3(1)   taaaaatttaattactttggaaatgagcagtaagtacgtttaaggaggagaagtcaaagttaacaccaacaatagtggaataaaactgttacagaatctt  14161500                                 ----------->GT1                               <---------ZAT14                               --------->ZAT14                                   -------->HAHB4                             <---------YAB1                                      --------->ATHB12                          <---------YAB1                                         <--------ATHB1                        <---------ICU4                                          --------->ICU4                        --------->ATHB51                                      --------->YAB1                        <--------HAHB4                                        <---------ICU4        <     <---------TOE2(3)  --------->YAB1                              <---------GLK1(2) ----------->RAV1(1)     <---------TOE1(3)  -------->ATHB1                          <-------TEIL  -------->HAHB4    <---- -->TOE1(3)            <---------YAB1                          --------->CCA1(2)<---------YAB1  <---- -->YAB1               <---------ATHB51              <---------ARR14(2)      <---------ATHB51   <---- -->TOE2(3)            --------->ICU4                --------->GLK1(2)       <---------ATHB12   ----- >GLK1(2)          ------------>CBF<---------ZAT6    --------->ARR14(2)      --------->ICU4<---------GLK1(2) -ARR11(3)  ----------->GT1<-----------GT1          <---------GLK1(2)      --------->YAB1------->GAMYB   aaaatttagggttatagtaaatacaattattactatagtgaaaatgagagaatagaatctgaaagattcaaattctctaataatgattcaacagaatgtc  14161600                                                                                            ---------                                                                                            <------NtERF2                                                                                            <--------                                                                                           <---------DEAR3(2)                                                                                           <---------RAP2.3(1)                                                                                           ------>NtERF2                                                                                          <---------DEAR3(1)                                                                                         --------->ATERF1(1)                                                                                         <------NtERF2                                                                                        <-----------HVH21                                                                                        <---------ATERF1(1)                                                                                        <---------SPL7                                                                                        <---------RAP2.3(1)                                                              --------->RVE1(1)        <---------ANAC46 ------->TEIL                                                --------->GLK1(2)         <---------bZIP60(1) ---------CCA1(2)          --------->ZAT6                    <---------ARR11(3)        <---------ANAC58 -----ANAC58       ------>ZmHOX2a(1)                         --------->ARR11(3)        <---------ANAC58 -----ANAC46    ------>ZmHOX2a(1)    ----------->HVH21      <---------GLK1(2)   ------------>CBF -----ANAC58 ------>MYB83<-----------GT1          <---------At4g35610          ----------->RAV1(1) ------>GT1  ------>MYB46(1)   --------->ZAT14    <---------CCA1(2)      <---------ICU4<---------DEAR3(1)   gtgaatctctctaccttcctcctctataaactctactctctgactcttcttcatctctcacaaaatctctcttaatctttgcaacaatggcgtcggctct  14161700                                                                   ------>NtERF2                                                                   --------->At4g35610                                                                  --------->DEAR3(1)                                                                 --------->ATERF1(1)                                                                 --------->DEAR4(2)                                                                 --------->RAP2.3(1)                                                                 <------NtERF2                                                                <---------RAP2.3(1)                                                                <---------ATERF1(1)                                                                <---------DEAR4(2)                                                               <---------ATERF1(2)                                                               --------->DEAR3(1)                                                               --------->ATERF1(2)                                                               --------->RAP2.6(2)                                                               --------->RAP2.3(2)                                                               --------->RAP2.3(3)                                                               --------->ANAC46                                                              --------->ATERF1(1)                                                              --------->DEAR3(2)                                                              --------->RAP2.6(1)                                                          <---------ZAT2                                                          --------->At4g35610                                                          --------->ZAT2                                                          <---------At4g35610                                                         ================================RAV                                                         ----------->RAV1(1)                                                       <---------At4g35610                                                       <---------ZAT2                                                       --------->At4g35610                                                       --------->ZAT2                                                  <------NtERF2------->GAMYB                                                 <---------ATERF1(1)                        <--------                                                 ------>NtERF2--------->MYB46(3)         <-------TEIL                                                --------->DEAR3(1)--------->RAP2.3(2)   --------->CCA1(2)                                              ------->GAMYB   --------->RAP2.3(1)      --------->ARR11(1)                                             --------->ANAC58 --------->RRTF1(1)       --------->ARR14(2)                                             --------->ANAC46--------->At4g35610       <---------ARR14(2)                                             --------->ANAC58<---------At4g35610      <---------HSFB2a(1)                                           --------->MYB52(1)--------->ZAT2           --------->HSFB2a(1)                                           <---------ATERF1(1)--------->ERF1         ----------->ARR10                                         --------->MYB46(3)--------->ATERF1(1)    --------->LBD16                                         --------->ATERF1(1) <---------ATERF1(1) <---------ANAC46                                         --------->DEAR3(2)--------->MYB46(3)   <---------LBD16                                <-----------RAV1(2)--------->DEAR3(1)        <---------At4g35610          <---------At4g35610 <-----------HVH21 <---------ALFIN1------>NtERF2----------->RAV1(2)    <       ------>NtERF2        <---------YAB1--------->DEAR3(1)--------->DEAR3(1) <-----------RAV1(1) <- >At4g35610     ------>ZmHOX2a(2)   --------->ALFIN1--------->LBD16<---------At4g35610<---------HSFC1(2) -At4g35610    <---------At4g35610--------->At4g35610 ----------->RAV1(1)    --------->At4g35610 <---   ctcttgctctgcctctgatctgattccattactatcaggtggagccaacgccaccgcagcagcagccgccgctgaatacatctgcgggagattcgacaca  14161800       --------->GLK1(1)    <------NtERF2   ------>NtERF2   --------->LBD16        --------->ANAC46  --------->LBD16         <---------ANAC55(2)                                         <---------ARR14(2)  <---------LBD16         --------->ANAC58                                            --------->ARR14(2) --------->ATERF1(1)      --------->ANAC58                                      <---------ZAT2 <------NtERF2            --------->ANAC55(2)                                   --------->At4g35610 <---------LBD16       <---------SPL7                                           --------->ZAT2 -REM1(2)            <---------At4g35610                                <---------HSFB2a(2) ---------RAP2.3(1)<---------RAP2.6(2)                       -------->P --------->HSFB2a(2) --------DEAR3(1) <---------LBD16          -------->P    <---------At4g35610    <---------At4g35610 --------HVH21----------->HVH21     ----------->RAV1(1)  --------->At4g35610   ------->TEIL   gtcgccgggaaattcactgatgcggcttacgcaatcgacaacacttaccttctcttctctgcttacctcgttttcgcgatgcagctcggtttcgccatgc  14161900                --------->AtLEC2              <---------ANAC46              <---------ANAC58              <---------ANAC58                                        <---------AtMYB61             ------->TEIL                                         <---------LBD16             <-------TEIL                                        --------->At4g35610             --------->SPL7                                   --------->ZAT14           <---------SPL7                                  --------->At4g35610          <---------ANAC58                                --------->ANAC46          <---------ANAC58                         --------->TGA2(2) <------NtERF2         <---------------AtSPL3                   <-----------HVH21 --------->LBD16         --------------->AtSPL3                   <-----------TGA1--------->ATERF1(1)         ------>ZmHOX2a(2)                       --------->ANAC58<---------At4g35610        <------ZmHOX2a(2)                        --------->ANAC58------>NtERF2       --------->ARR14(2)                       ------->TEIL  --------->ZAT2       <---------ARR14(2)                    <---------MYB52(2)<-----------RAV1(2)                  <     --------->LBD16                         --------->ANAC58 --------->At4g35610             -------    <---------ANAC46                   <---------YAB1     <---------DEAR3(1)                  <------   <---------LBD16               ------->TEIL--------->ANAC58 <---------At4g35610   <-----------GT1 <   tctgtgccggatccgtacgtgcaaaaaacacgatgaacattatgctcacgaacgtcatcgacgctgcagccggaggtctcttctattatctcttcggttt  14162000             <---------GLK1(1)             --------->GLK1(1)            <---------ARR14(2)            <---------AGP1                                                             ------>ZmHOX2a(1)            --------->ARR14(2)                                           <---------TOE2(2)           <---------CCA1(2)                                             <---------TOE1(2)      <----------DOF2                                                    ------>MYB46(1)     <---------ANAC58                                                    ------>MYB83 --------->TOE2(3)     <---------ANAC58        <-------TEIL                              --------->TOE2(2) ---------DAG2------>ZmHOX2a(2)                                       --------->MYB46(3) -->ARR14(2)--------->ARR11(3)  --------->At4g35610               ------>ZmHOX2a(1) <---------YAB1 ---ARR14(2)<---------ARR11(3)  <---------At4g35610      <---------YAB1--------->TOE1(2)    <-------- ----------DOF2   ------>ZmHOX2a(1)           <----------DOF2    --------->TOE2(3) <-----------GT1   cgcttttgcttttggatctccttctaatggattcatcggaaaacatttctttggaatgtatgattttcctcaacctacgtttgattatccttattttcta  14162100                        --------->At4g35610                        <---------At4g35610                        ------>NtERF2                      --------->ATERF1(1)                      <------NtERF2                      --------->RAP2.3(1)                      --------->DEAR4(2)                     <---------ATERF1(1)                     <---------RAP2.3(1)                     --------->ABI4(1)                     ------>NtERF2                    --------->ATERF1(2)                                  --------->ARR14(2)                    --------->RAP2.3(2)                               <---------ANAC58                    --------->RAP2.3(3)                               <---------ANAC46                    --------->ANAC46                                  <---------ANAC58                    <---------ATERF1(2)                               <---------ANAC55(1)                    <---------DEAR3(1)                                --------->ANAC55(2)                    --------->DEAR3(1)                            <-------GAMYB ------>ZmHOX2a(2)<---                   --------->ERF1                                --------->MYB52(2)              <---                   --------->ORA47(2)                   ===============================HOX2a_HOX2a                   --------->RAP2.3(1)           <---------ANAC46<---------MYB46(3)              <---                   --------->ATERF1(1)          <---------At4g35610   <---------ANAC55(2)     -------                   --------->DEAR4(2)  <---------MYB46(3)      <---------MYB52(1)           <--------      ------->TEIL<---------RAP2.3(1) --------->ALFIN1  <------ZmHOX2a(1)<---------ARR14(2) <-------- ---GT1 <----------DOF2--------->DEAR3(1)       --------->At4g35610<---------MYB52(1)    <----------DOF2   tatcaatggactttcgctatcgccgccgctggaatcacgagtggttcgatagcggagaggactcagttcgttgcgtatttgatctattcttctttcttga  14162200  Previous    Next  AGI:  At4g28700.1    Description:  ammonium transporter, putative. Identical to Ammonium transporter 1 member 4 (AMT1.4) [Arabidopsis Thaliana] (GB:Q9SVT8;GB:Q4PSH7); similar to AMT1,1 (AMMONIUM TRANSPORT 1), ammonium transmembrane transporter [Arabidopsis thaliana] (TAIR:AT4G13510.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76352.1); similar to high affinity ammonium transporter [Lotus japonicus] (GB:CAE01484.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71508.1); contains InterPro domain Ammonium transporter; (InterPro:IPR001905); contains InterPro domain Rh-like protein/ammonium transporter (InterPro:IPR010256) Range:  from: 14161687    to: 14163201    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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