Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               --------                                                                                       --------->MYB52(1)            <---------ARR14(2)                                                        <---------ALFIN1            --------->ARR14(2)                                                       --------->SPL7            ------->TEIL                                                            ------>MYB46(1)            --------->GLK1(2)                         <---------GLK1(2)             ------>MYB83           <---------ARR14(1)                <-----------RAV1(2)                  --------->DEAR3(1)         ------>ZmHOX2a(2)                 <-----------HVH21                      <---------MYB52(2) ------->At4g35610                 <-------TEIL<---------ZAT2                     <---------MYB46(2) --------ZAT2            <---------ANAC46  ------>NtERF2                          --------->MYB46(3) --------At4g35610       <---------ANAC58 --------->ANAC58                       --------->ANAC46 ------->ZAT2            <---------ANAC58 --------->ANAC46                       --------->ANAC58 --------->RAV1(2) --------->ARR11(3)     --------->ANAC58                       --------->ANAC58  <- --------RAV1(2)   <---------ARR11(3)    <---------LBD16      <---------ICU4  <---------ABI4(2)   ---   cagctggctgatcgaatctgagattttgcctgtgagattcatccccgccaggtcgagcttctcaacattgccatttgagttgcaccgaacaccggtccaa  14147100                                                                            --------->At4g35610                                                    ------>ZmHOX2a(2)   ----------->RAV1(1)                      <---------HSFB2a(1)          <------ZmHOX2a(2)   --------->At1g77200                      --------->HSFC1(2)          <---------ARR11(3)   --------->DEAR4(1)                      --------->HSFB2a(1)         --------->ARR11(3)   --------->DEAR3(1)       ------>ZmHOX2a(2)        <----------DOF2   --------->ARR14(2)   ----------->HVH21      ------- --------->AGL3       <---------HSFC1(2)          <---------ARR14(2)   --------->DREB2C(2)    ------- --------At5g28300 ---------->DOF2               <------ZmHOX2a(1)    --------->DEAR3(2)    <-------GAMYB ------>YAB1     ----------->HVH21    ---------->DOF2               <-----------GT1     <---------ZAT2   ttacagtgatcgctggtgtctgaaagcttccagtctttgagaaagttgagaggatccacaagagttgatttcaccgacagcaaaacagagagctcgttga  14147200                                                                 --------->ARR11(3)           --------->At4g35610                                   <-----------GT1   --------->ETT(2)    <------ZmHOX2a(1)        ---------->DOF2  <---------ARR11(3) -->WRKY12 <---------At4g35610           --------->ZAT6         --------->YAB1 ---->HVH21----------->GT1      --------->MYB46(3)<---------TOE2(3)                          ------>ZmHOX2a(1)   cattgtcgatggaagctaaaacagaggaagtagaaccaatgtaacagtagtaaaggaagagaactattatcttcatcttcatcttcaacttcttcctctg  14147300                                                                         <---------ANAC46                                                                         --------->ALFIN1                                                                       <---------MYB46(3)                                                                      <---------AtMYB61                                                                      --------->ALFIN1             ------->GAMYB                                         --------->ALFIN1           --------->At4g35610                              --------->ANAC58           <---------At4g35610                              --------->AtLEC2        ----------->GT1         --------->REM1(1) ------>ZmHOX2a(1)                --------->ANAC58  <------ZmHOX2a(1)     --------->At4g35610  --------->TOE2(3)            <---------ZAT18<---------DEAR3(1)    ---------   tctcaacagcttcaactgaaacttgactccttagttcattaccaagaacgagactagtgaacatgcaaggaggtggtggaggaagagagtagaataagaa  14147400                       <---------ANAC46                                        ------->TEIL                <---------ANAC58                                        <---------AHL20(2)                <---------ANAC58               ----------->HVH21      <---------AHL20(2)              <---------YAB1             <---------AHL20(2)       --------->CCA1(2)           <---------ARR14(2)     <---------YAB1                 --------->ARR11(3)              <--- >YAB1     --------->ARR14(2)     ----------->GT1                <---------ARR11(3)             -----   gaaactctgtaagtatatgcttgttctgtgtttattatgttatatatatgtgacatataaacacagagatatataaaaatgaatcttggttttatatgga  14147500                                                        <------ZmHOX2a(2)                                                       --------->AGP1                                                       <---------AGP1                                                       --------->ARR14(2)                                           *TSS        <---------ARR14(2)              <------------CBF       ---------->DOF2   --------->ANAC55(2)           --------->ARR14(3)            --------->ARR11(3)  <---------ZAT6         <---------ANAC55(1)           <---------ARR14(3)  <---------HSFC1(2)  --------->ICU4         <---------ANAC55(2)           <---------ARR11(3)  --------->HSFC1(2) ------REM1(1)      <---------ZAT6        ----------->GT1------>ZmHOX2a(2) --------->HSFB2a(1) -->TEIL            ----------->GT1     ---------->DOF2--------->ARR11(3)  <---------HSFB2a(1)-------   tgtagtgatcaaagagtatgtagggttacatgttctaagaaaaaaagaaataaacaagatcttggaagtatttgagaaatttcttaagacattgaacatg  14147600                                                              <---------AHL20(2)                                                              --------->AHL20(1)                                                              --------->AHL20(2)                                                 <------MYB83--------->AHL20(2)                                                 <---------ANAC58                                                 <---------ANAC55(1)                          -------                              <---------MYB52(2) <---------ANAC58                          ----------                      <---------ICU4             <---------ANAC46                        <---------ZAT14       --------->GLK1(2) --------->YAB1          <------MYB46(1)               --------->ATHB12 -->TOE1(2)         ------------>CBF            <---------DEAR3(1)     <---------WRKY12  --------->ZAT14   tgaagagagaatgtgttttcttcacaattacaactaatccaaaaatgtgttcggtgttttaaaattaattaagtcaactattgatttgctgtatagtgat  14147700                                              <-----------GT1                                             --------->ICU4                                           <---------ICU4                                          <---------AHL20(2)                          <--------P                                          <---------YAB1                           <---------TOE2(3)                                          --------->AHL20(2)             <---------ANAC58                                         --------->AHL20(2)              <-----------RAV1(1)                                         <---------AHL20(2)              <---------ANAC58    <-------                                   --------->YAB1                        --------->ALFIN1<---------ANAC58                                  --------->ZAT6<---------YAB1         <---------ANAC46  <---------ANAC58                        --------->TOE2(3)<---------AHL20(1)            <---------ANAC58  <---------ANAC46 -->ATHB12              --------->TOE1(3)--------->AHL20(1)            <---------ANAC58 <---------At4g35610 ->GT1                <---------TOE1(3) --------->YAB1         <-------TEIL   <---------ANAC46   ttgtgaatgtgccatagatagcttaagcttaaactaatactaatataattactattttttatacatacacttggtgtgtggcatagaggtagcttatgct  14147800                                                                              --------------->AGL15                                                                              <---------------AGL15                                             <---------ALFIN1                ----------------->AGL1                                          <-----------GT1                    <-----------------AGL1                               <----------DOF2   <---------DAG2          <---------ANAC58                            --------->ARR11(3)   <----------DOF2      <---------TOE2(3) ----------->GT1                 <----------DOF2         <-----------GT1<----------DOF2  <---------ANAC58           -               <---------At4g35610 <<<<<<<<<GATA-1   ---------->ID1  <-----------GT1  <------ZmHOX2a(1) --YAB1 <---------YAB1      <---------ARR11(3)  <---------DAG2   <----------DOF2    <---------TOE2(3)   taacttcattctaattcagcttttgtagaatgtctttatctattttcccacctttttccttttgtgtcttttaacgcttgccttctaaggaagaaaaaca  14147900                                                    ------->TEIL                                                 <---------YAB1                                               -------->HAHB4                                               <---------ICU4                                  ------                                               --------->YAB1                                 <------NtERF2                                              --------->ICU4           --------->ARR11(3)    ------>NtERF2                                              <---------ATHB12    ----------->GT1           ---------                                             <---------TOE2(3)<---------AHL20(1)           --------->MYB46(3)                                            --------->YAB1    <---------AHL20(2)      --------->CCA1(2)         <---------MYB52(1)           <---------ANAC55(2)     --------->AHL20(1)     --------->ARR11(3)    <-----------GT1                   --------->ANAC55(2)    --------->AHL20(2)     <------ZmHOX2a(1) -------->AHL20(2)     --------->KAN4(1)  <---------AHL20(2)<---------YAB1        <---------TOE2(3) -   aaaaatataccattagctcttagcaatattcgattacattacatattaatgatgaatcagtgattatattgtaaatctcgtatttaggatatagccaccg  14148000  Previous    Next  AGI:  At4g28650.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to CLAVATA1 receptor kinase (CLV1) [Arabidopsis thaliana] (TAIR:AT1G08590.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G61480.1); similar to hypothetical protein OsI_009750 [Oryza sativa (indica cultivar-group)] (GB:EAY88517.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40554.1); similar to Hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAO17351.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009 Range:  from: 14143990    to: 14147543    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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