Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       --------->DOF5.7(2)                                    <-------GAMYB                                   <---------ZAT6                       <---------ARR14(2)                       --------->ARR14(2)                     <---------DEAR3(2)        --------->HSFC1(1)    --------->LBD16          <-------MYC3        <---------HSFB2a(2)  <---------HSFB2a(2)       ------->MYC3        --------->HSFB2a(2)  --------->HSFB2a(2)       <-------PIF5        <---------HSFC1(1)  <---------LBD16            <-------MYC2 -------->P <---------ZAT14------>ZmHOX2a(1)           ------->PIF5        --------->HSFB2a(2) ------>MYB46(1)      --------->GLK1(1)   ------->GAMYB------->MYC2        <---------HSFB2a(2) ------>MYB83         <---------GLK1(1) --------->RAP2.6(3)  <---------At1g77200 ------->MYB46(3)   <---------RAP2.6(3)<---------DOF5.7(2)   <---------DEAR3(1)                 ----- ------->AtMYB61   --------->RAP2.6(2) --------->MYB52(1)  <-----------HVH21      ---------->DOF2   accaactcttcgagaacagagccgaaatcctccgggactgttaacggcaacgaggcacgagcgtcggtgaagcatttgtagaagaaaagcttacgaaggt  14117000                                                                                                =====                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                -----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                            ---------                                                                                            <--------                                                                                           <---------ANAC58                       <------ZmHOX2a(2)                                                   <---------ANAC58                ==============HOX2a_HOX2a                                                  --------->ANAC55(2)          <---------ZAT14                                                                  <---------ANAC55(2)          --------->ZAT14   <---------ANAC58                                           <---------GLK1(1)          ---------->DOF2   <---------ANAC58              <---------ANAC58    --------->TOE2(3) <----       ----------->GT1--------->ARR11(3)                  <---------ANAC58<--------P   --------->GLK1(1)  ---------->DOF2    <------ZmHOX2a(1)                    <---------ANAC46=========================== ---->ALFIN1    <------ZmHOX2a(1)                       <---------YAB1    ===========================   gtttgaaagcagtaaagaggagaggatcaagcgtggcattagaagagcaaggagggttttgagtgtaatccgagaggtagcctaaatggaactccgtgac  14117100      <---------O2                                           <---------MYB46(3)      <---------TGA1a                                       --------->ALFIN1  --------->MYB46(3)                                      <---------At4g35610  --------->DEAR3(2)                                      <---------ZAT2 ===============bZIP_bZIP                                 <---------O2 ---->O2                                                 --------->MYB55(2) -----ANAC55(2)                                         <-----------RAV1(2) -----ANAC46                                            <---------MYB55(1)                --------->HSFC1(2) -----O2                                               <------NtERF2                      <---------MYB46(3) -----ANAC58                                           <---------MYB52(1)                 <---------HSFB2a(1) ---->bZIP60(1)                                       <-----------HVH21           <------NtERF2 ---->ANAC55(2)                                       <---------SPL7            <---------DEAR3(1) ---->TGA1a                                           ------>NtERF2             <---------ANAC46 -----ANAC58                                          <---------RAP2.6(3)      --------->ATERF1(1) -----ANAC55(1)                                       <-----------TGA1        <-----------HVH21 -----bZIP60(2)                                      --------->RAP2.3(3)      <---------SPL7 -----TGA1a        <---------MYB52(1)                --------->DEAR3(1)      --------->ETT(2) --->HVH21      <------NtERF2                       <------NtERF2            <---------ANAC58 --->TGA1     --------->DEAR3(1)                    --------->RAP2.3(1)      <---------ANAC58 --MYB52(1)   <---------DEAR3(1)                   ------>NtERF2---------->DOF2<------NtERF2 >LBD16     <---------ATERF1(1)                   --------->ANAC46           <---------ANAC46 ---HVH21  ----------->HVH21                      --------->DEAR3(1)    <---------At4g35610   ------- -----bZIP60(1)------>NtERF2                      <---------DEAR3(1)    --------->At4g35610   ------- ===============MYC_MYB      <---------ANAC46  --------->ANAC46<---------REM1(1)<---------LBD16 =====MYC_MYB--------->ATERF1(1)  <---------TOE2(3)<---------ATERF1(1)<-----------RAV1(2) <---------HSFC1(2)   gtgaacagacgttgcgacgccgttttgagaagcgtagaggttatcgcaaacgacgccgtcaggtggtgaagcgcagatgtcgtcggggaagatggttcgc  14117200                                                           <---------HSFB2a(2)                       --------->HSFB2a(2)                 --------->HSFB2a(2)                       <---------HSFB2a(2)           <---------TGA1a         <---------ANAC46             --------->WRKY38(1)                     --------->TGA1a         --------->ANAC58      <-             <---------ZAT14                         <---------O2            --------->ANAC55(2) <---             --------->WRKY12                        --------->O2            --------->ANAC58<------NtERF2             --------->ZAT18                       ------>NtERF2          ----------->TGA1<------NtERF2 -->ANAC58 <---------At4g35610    --------->ETT(2)--------->DEAR3(1)      ----------->HVH21<---------DEAR3(1) -->ANAC58 --------->At4g35610    <---------ETT(2)----------->HVH21    <---------AtMYB61<---------DEAR3(1)   catgagatggctgagttgactgagtcgagaactcggtagaccgcttcttgctccgacgggtctagagcgagttgtggtgacgcattttcgtcgtcgtcgc  14117300                 --------->ZAT14                 <---------ZAT14                --------->ALFIN1              <---------ANAC46            <---------YAB1       <------MYB83       <------MYB46(1)       <---------At4g35610      <---------MYB46(3)                                         ------>NtERF2     <---------ANAC58                                           --------->RAP2.6(2)     <---------ANAC46                                           --------->ANAC58     <---------ANAC58                   <------ZmHOX2a(1)  ---------->DOF2                     <-----   <---------MYB46(3)          ---------->DOF2       <--------P --------->ANAC46               <-----   --------->MYB55(2)  --------->At5g28300         ----------->GT1   --------->AtLEC2       --------- ----------RAV1(1)   <---------ANAC46<------ZmHOX2a(1) ----------->GT1 ---------->DOF2     ---------- -------DOF2--------->ICU4   ------------------------>ANAC81    --------->ANAC58      ----------->GT1   tttgttggctggtgatgagtgtagcggtgaagagaaagaggaggagaagagagaggttagtaaaagacgccatgaaagcagagagagagagcaaaaagct  14117400                                                             <----------DOF2                                                            <---------DAG2                                                            <-----------------AGL3                                                       --------->ANAC58                                                       --------->ANAC55(2)                                                       <---------ANAC55(2)                                                       <---------ANAC58   <----------DOF2                                    <-------TEIL <---------At4g35610                           --------->TOE1(2)                                ----- <---------ZAT2                      --------->MYB52(2)<---------ANAC58                     <-------- --------->At4g35610                 <---------MYB46(3)--------->ANAC58                   ------>ZmHOX2a(1) ----ANAC58               <------MYB46(1)   --------->MYB52(1) <-----------TBP          ------------- ----ANAC58               <------MYB83 ---------->ID1 --------------->AtSPL8     <-----------HVH21 >DAG2                --------->ATHB12<-------GAMYB   --------------->AtSPL3     <-----------TGA1 >DOF2             <------------CBF  <-----------RAV1(1)  ------->TEIL  <-------TEIL    <------------   tgcagctttgttttttgtttggattgtttggttttgggtttgttgctaacgagcgatacgtacctttttatgggttcatgcttcgtcatgtcctctttag  14117500      <---------ANAC55(2)      --------->ANAC55(2)                         <----------DOF2     ---------->DOF2        <-------     <-------TEIL                              ------->TEIL       <------------CBF           <------- ------>GT1                                <---------TOE2(3)    <---------AHL20(2)           <------- --DOF2                                  <---------AHL20(2)    --------->AHL20(2)       <XXXXXXXXXXXX ---->AGL1        <---------ALFIN1      --------->AHL20(2)    ----------->TBP          <-----------RAV1(1) -----AGL1  <-----------GT1          --------->ICU4         ------>ZmHOX2a(1)  ------------>CBF   gtgaaaatacatattaacccctacttgataaaccgagtgatatttaatgaagcttttcattcctataaaattgaaagaaaacacaatttttgttgttgtt  14117600                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                             <-------   ----------->GT1                                                     --------->ICU4    ---------->DOF2  ----------->GT1                                                 ------>ZmHOX2a(1)--------->YAB1 ----RAV1(1)                           <-----------GT1            ----------->GT1  --------->AHL20(2) --MYB46(3)                          <---------AHL20(2)    <---------At5g28300  --------->YAB1 --REM1(1) --------->RVE1(1)      ------->TEIL            <-----------GT1      <---------ATHB51    -- XXXXXXXXMIR3932A/B     <---------------AGL15          --------->ARR14(2)      <---------ATHB12<-----   gcaagggttaaaaatatcagcatttactaattcatgtattttttcttcactattcagtattcacagtcctgtaatttttcaataataaaaaaaaagattc  14117700        --------->ANAC58                                         ----------->GT1      --------->MYB52(1)                                        <---------MYB46(3) --ARR14(2)                                                  <---------ANAC58                -------- ->ARR11(1)                                                  <---------ANAC55(1)            --------- ->ARR14(2)            ----------->GT1         ---------->DOF2<---------LBD16              ---------- --GLK1(2)       <--------P              ----------->GT1     <---------ANAC58         ----------->GT1 --------->GT1 ----------->GT1          <---------------AtSPL8--------->LBD16      --------->ALFIN1 --TEIL --------->ANAC58       --------->MYB52(1)            <---------ANAC46 ---------->DOF2--------   gtagttaaaaacggaaggggtaagatagtaaaaaaacagaaaatggtacaaaagcttcacgttccgtgggtaaaaaacttcaaaggtgaaggaaaaagca  14117800                                                                                           <---------ARR11(3)                                                                                           --------->ARR14(2)                                                                                           --------->ARR11(3)                                                                                           <---------ARR11(1)                    --------->ARR14(2)                                                     <---------                    <---------ARR14(2)                                               <-----------GT1               --------->ANAC58                                                  <----------DOF2               --------->ANAC58                                               ------>MYB46(1)              --------->SPL7             ------>NtERF2                        ------>MYB83 <---------ARR14(2) ->ANAC58   --------->LBD16          --------->ANAC46                       <---------ALFIN1 >DAG2      <---------SPL7           --------->ANAC58        ------->TEIL   --------->AtMYB61 >DOF2--------->AtMYB61              --------->ANAC58      <---------ZAT18 --------->MYB46(3)       < ->ANAC58--------->MYB52(1)     ---------->DOF2       <---------YAB1     <-----------GT1  <---------CCA1(2)   agttgggaccataccggacgaaaatttgcagagagaaagacgacaccatttcgatttttaatgcacattgactaaaaaccacccttttaaacatatcttc  14117900  Previous    Next  AGI:  At4g28560.1    Description:  RIC7 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 7); protein binding. similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT1G13230.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83874.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 14116021    to: 14117373    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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