Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 --------->AtLEC2                                                                             <---------ANAC58                                         <----------DOF2                     <---------ANAC58                                      <---------ARR11(3)                   --------->ARR14(2) ----------HVH21                      --------->ARR11(3)                   ------->TEIL ------------- ---->O2                           <---------ICU4                          --------->ARR11(3) -----TGA1a             --------->AHL20(2)                                 <---------ARR14(2)   <---- ---->TGA1a             <---------AHL20(2)                                 <---------ARR11(3) ------- -----O2     ------>ZmHOX2a(1)  --------->YAB1                            <---------CCA1(2)  <------ZmHOX2a(2)   gtgtcaccttgtttcctcgtttttttttaatttttcataagttcttttgttttatcttcaatacaaatttttggctgtatcttgcaaactcttcgatcat  14087200                       <---------ARR11(3)         --------->ANAC46         --------->ANAC55(2)                                                                  -------         <---------ANAC55(2)                                                                 <-------      --------->ARR14(2)            ----------->GT1                                        --------->YAB1      <---------ARR14(2) ------>ZmHOX2a(2)     <---------AHL20(2)  --------->LBD16--------->AHL20(2) -------->WRI1 --------->ZAT6       <---------ZAT6      --------->GLK1(2)         --------->YAB1 -----CCA1(2) <---------ZAT14       <---------ANAC46   <---------GLK1(2) ---------->DOF2 ------->TEIL -->YAB1<-------TEIL   --------->ARR11(3)  ----------->GT1       <---------LBD16  <---------AHL20(2)   atcgccaatatacgtgaacactggtgatctaatttgttgtgttaattgttaaatttagattctattctccggtttaaaagtgaattatatgtatcatggt  14087300                            ----------->GT1                            --------->YAB1                           <---------YAB1                           ----------->GT1                       <---------AHL20(1)                       --------->AHL20(1)              ----------->GT1                       --------->AHL20(2)              --------->ANAC58                       <---------AHL20(2)              --------->ANAC58                    --------->YAB1                   ---------->DOF2                   <---------YAB1                 <---------ANAC46                      <---------ANAC58                 --------->YAB1                   <---------ANAC58                      <---------ANAC46                <---------YAB1 --------->AHL20(2) <---------ANAC58                      <---------ANAC58 ---->GT1       ----------->GT1<---------AHL20(2) <---------ANAC55(2)     <-------TEIL ---------->ID1 --YAB1       <---------At4g35610          <---------WOX13(1)            --------->CCA1(2)   taaaacattgtaagtaagatgataataaaatgataaatttagttgatggataacgtgaagcaaaaaatgagatagatacatttgattttgtcgtattttg  14087400                                                              <---------ANAC58                                                              <---------ANAC55(1)                                                              <---------TGA1a                                                              <---------ANAC46                                                              <---------ANAC55(2)                                                              ==================bZIP_DOF                                                              <---------bZIP60(2)                                                              <---------ANAC58                                                              --------->TGA1a                                                              --------->O2                                                              <---------O2                                                           ----------->TGA1                                                           ----------->HVH21                --------->CCA1(2)                  ----------->HVH21                                -              <---------At4g35610                  --------->ZAT18                         --------->ANAC58              <---------ZAT2                     --------->ZAT2                            --------->AtLEC2              --------->At4g35610           <---------ANAC58 ----------->STF1    --------->ZAT14    -            <---------ZAT18   <------ZmHOX2a(2)  <---------ZAT2 ----------->GT1  <---------ZAT14  ---            --------->ZAT18  --------->ARR11(3)  --------->At4g35610 ---------->DOF2       --------->ANAC58     --------->LBD16         <---------ARR11(3)  <---------At4g35610 ================================   <---------LBD16  --------->ANAC46        <---------ANAC58 <-----------------------TaNAC69(2)   <--   acatatgcggagagtgagctacgcgcatgaagatcaagagacacttgctcgagctcacagagtgacgtgtaaaaagcttagactgaagtccccatgcaaa  14087500                                       ----------->TBP       --------->TGA1a           ------------>CBF       --------->O2            ----------->HVH21       <---------O2          <---------O2       <---------ANAC58      --------->TGA1a       <---------TGA1a       --------->ANAC55(2)       <---------ANAC58      <---------TGA1a     ------>ZmHOX2a(1)       --------->O2    --------->TOE1(2)     --------->ZAT18           ------>ZmHOX2a(1)    --------->TOE2(2)   --------->At4g35610      ------>ZmHOX2a(1) ----->MYB46(1)         <---------At4g35610<-----------GT1 ----->MYB83            --------->ZAT2<---------AHL20(1)                             ------->GAMYB  - ------>TOE2(3)       <-------PIF5    <---------ARR11(3)                            <---------MYB52(2) ================bZIP_DOF <---------ZAT18<---------AHL20(2)   *TSS        <---------CCA1(2)---------- -------MYB59         ------->PIF5    --------->AHL20(1)     <---------MYB52(1)     --------->MYB46(3)   cctaatcctacgtggctcaaaccacgagctcacttgacaatatataaactcctcctaagtcccgttctcttcatccatctctcacaacaaacaaaaagaa  14087600                                                           ------>NtERF2                                             --------->TOE2(1)   <---------ANAC58                                             --------->TOE1(1)   <---------ANAC58                                            ------>ZmHOX2a(1)<---------ANAC58                                      <---------ARR14(2)<---------At4g35610            ------>ZmHOX2a(1)                             <---------HSFC1(2)      --------->RAP2.6(3)           <---------ARR14(2)                             --------->HSFB2a(1)    <---------DOF5.7(2)     <---------TGA1a  --------           --------->At4g35610   <---------LBD16    --------->MYB52(1)      --------->O2     <-------           <---------At4g35610  <---------LBD16   ------>ZmHOX2a(1)         --------->TGA1a  --------      <---------At4g35610    <---------HSFB2a(1) --------->TOE2(3)      <-----------HVH21    <------- ---------->GT1     ------>ZmHOX2a(1) --------->ARR14(2)--------->At4g35610 <---------O2  ------>ZmHOX2a(1) >DOF2--------->At4g35610    --------->HSFC1(2)---------->ID1<---------ANAC58      --------->ARR14(2)   aatggttaagctcagcaatctcctcgttgcaaccttcggggttctcctcgtccttaacggctgccttgcgaggcagtcacttggggttcctcctcagcta  14087700                                                                                                  ---                                                                                                  ---                                                                                            ------>MYB83                                                                                            ------>MYB46(1)                                                                                          --------->AtMYB61                                                                                      --------->MYB46(3)                                        <------NtERF2                             --------->TCP16(2)                                       --------->MYB52(1)                        --------->PCF2   <--                                     --------->MYB46(3)                          <---------TCP16(1)                                   --------->ANAC46                   <------ZmHOX2a(2)   ------->GAMYB      <---------ZAT6     <---------ARR11(3)                          --------->AGP1 --------->AtMYB61 ->At4g35610         --------->TOE2(3) ------>NtERF2                 --------->ARR14(2)   <---------ALFIN1 --ZAT2  --------->ARR14(2)        --------->ANAC58                  <---------ARR14(2)  --------->MYB46(3) ->ZAT2  <---------ARR14(2)        --------->ANAC58                 --------->At4g35610  <---------MYB55(2) --At4g35610--------->TOE2(3)  <---------HSFB2a(2)--------->YAB1<-----------HVH21<---------PCF5   <--   cagaacgagtgtaacctcgacaacctagatgttctccaagccaccgaaactatcaagagtgaagccggtcagatcgagtactgggaccacaaccaccctc  14087800                     <---------MYB52(1)           <------MYB46(1)     <---------ANAC55(2)           <------MYB83 <---------ANAC58          <---------AtMYB61    --------->ANAC55(2)       <-----------RAV1(1)  <---------MYB52(1)       --------->ALFIN1 <---------ANAC46                     <---------ALFIN1                       <    <---------MYB52(1)  <---------ANAC58               <---------ANAC58                    --------->ANAC46 ------>At4g35610   <-------GAMYB<---------AHL20(2)    <---------ANAC58                   --------->SPL7 ------>ZAT2       <---------ANAC58                  <-----------GT1                     ------>ZmHOX2a(1) -------ZAT2    <---------ARR14(2)                 <----------DOF2                      --------->TOE2(2) -------At4g35610  <---------ANAC58           <---------RAP2.6(2)            --------->LBD16        <   agctccgatgtgttggtgtttccgttgctcgttatgtaattgaacaaggcggtctttacttgcccaccttcttcacttccccaaaaatttcctacgtcgt  14087900                                         ------->TEIL                                     <---------TOE2(3)                               <---------AHL20(2)                               --------->AHL20(2)                   <---------AHL20(2)                              <---------AHL20(1)                    <---------YAB1               <---------ICU4 --------->AHL20(2)                  --------->CCA1(2)              --------->ICU4  <---------AHL20(2)                 <---------ARR11(3)              <---------YAB1  --------->YAB1                 --------->YAB1            --------->YAB1   <---------ATHB12--------->ARR11(3)  --------->ARR11(3)    <-------TEIL          --------------->AGL15            <---------TOE2(3)         --------->YAB1 < ---------TOE1(3)  <-----------GT1 <---------AHL20(2)    <---------AHL20(2)         <---------YAB1 <- ---------TOE2(3) <-----------GT1 --------->AHL20(2)     --------->AHL20(2)  <-----------GT1 <-------   tcaaggttcatacatgataattacccttccaataaaattaatgtatatatcatgtctaattaatgaagatataatcgattcaccatatgataactctttt  14088000                                  <---------GLK1(1)                            --------->ARR14(2)                  --------->AHL20(2)                                                 <---------At4g35610                  <---------AHL20(2)                                                 --------->At4g35610                 <---------AHL20(1)                                                  ------>NtERF2                 --------->AHL20(2)                <---------PCF2   <---------ARR11(3)                 --------->AHL20(1)    <---------LBD16<---------LBD16                <---------ZAT2          <---------MYB59   <---------ARR14(2)     --------->PCF5   --------->ARR11(3)          <----   ------>ZmHOX2a(1)  <-----------GT1  <---------At4g35610          --------->ARR14(3)  --------->At4g35610 -----------GT1  <---------AHL20(2)    --------->At4g35610   --------->ALFIN1       --------->DEAR3(1) ----------GT1  --------->AHL20(2)--------->GLK1(1)--------->TCP16(1)            --------->ANAC58 ---DOF2  --------->TOE2(3)<------ZmHOX2a(1)    --------->ALFIN1 ------>NtERF2   --------->ANAC58   ttttcctctctacctaaaattaatttacaggaacgggtatcagcggaagagtggtccctggatgtgccgagaccttcatggactcgcagccgatgcaagg  14088100  Previous    Next  AGI:  At4g28520.1    Description:  CRU3 (CRUCIFERIN 3); nutrient reservoir. similar to CRA1 (CRUCIFERINA), nutrient reservoir [Arabidopsis thaliana] (TAIR:AT5G44120.2); similar to CRA1 (CRUCIFERINA), nutrient reservoir [Arabidopsis thaliana] (TAIR:AT5G44120.3); similar to 11S globulin precursor [Sinapis alba] (GB:AAX77384.1); contains InterPro domain RmlC-like jelly roll fold (InterPro:IPR014710); contains InterPro domain Cupin 1; (InterPro:IPR006045); contains InterPro domain Cupin, RmlC-type (InterPro:IPR011051); contains InterPro domain 11-S plant seed storage protein; (InterPro:IPR006044) Range:  from: 14087562    to: 14089802    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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