Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 ------->TEIL  ----------->GT1         <---------ANAC46      <---------ARR14(2)                         <-----------GT1    --------->O2               --------->ARR14(2)                  ------>MYB46(1) --------GT1                   <-----------ARR10                   ------>MYB83 ----AHL20(2)                 <---------CCA1(2) --------->YAB1   ------->GAMYB >AHL20(2)      --------->TOE1(3)     <---------HSFB2a(2)       --------->MYB46(3) -AHL20(2)      --------->TOE2(3)     --------->HSFB2a(2)     <-----------GT1     <----------DOF2  --   aactccatgtgacttaaaccctaacaagaattgtatcttcccagaacgagttataatgtggatttaaccaacttcttaacctcgctttctaaatagcaat  14072100                                                                              <---------GLK1(2)                                                                              --------->ARR14(2)                                                                           --------->LBD16                            --------->REM1(1)                             --------->LBD16                           --------->SPL7            --------->YAB1       <---------LBD16                           <-------TEIL<---------ARR11(3)             ------>ZmHOX2a(2)                 --------->At4g35610   <---------ARR14(2)            <---------GLK1(1)                 <---------At4g35610   --------->GLK1(2)             <------ZmHOX2a(2)           ----           <---------ARR11(3)          --------->ARR11(3)            --------->GLK1(1)       <-------           <---------AHL20(1)          --------->ARR14(2)       <-----------GT1              --------           --------->AHL20(1)   <---------LBD16 <----------DOF2<-----------GT1<---------ARR14(2) ----     --------->YAB1    --------------->AtSPL3 --------->At4g35610   --------->ARR14(2)       -------- --------->RAV1(1)   ------------------>SPL14 <---------At4g35610   <---------ARR14(2)       <-------   gcgacattcacaatatatcagctaaaccgtacatctcggaaaatctacagcttaatcgtgagttttttccgatctccctggattctttctaactcagcta  14072200                                                        <----------DOF2                                                  ------>ZmHOX2a(1)                                                ------>ZmHOX2a(2)                            <-------                                               <------ZmHOX2a(2)                             --------                                              --------->ARR11(3)                             <------- --------->ANAC58                             <---------ARR14(3)                             -------- --------->ANAC58                             --------->AGP1<-----------GT1                 --------- ----->ANAC58                                 --------->ARR14(3)                            <-------- --At4g35610      --------->YAB1              <---------GLK1(2)--------->YAB1               --------- ->At4g35610   -------->HAHB4                 <---------ARR11(3)                           <---------GLK1(2) ----->ANAC58  <---------ICU4                 <---------ARR14(2)                   ------>ZmHOX2a(1) ->ZAT2       --------->ICU4                ----------->ARR10<-----------GT1      --------->TOE1(3) --ZAT2     --------->YAB1    ---------->DOF2 --------->ARR14(2)   <----------DOF2--------->TOE2(3)   agcacgattccaactaataatcgaaatcgatataaagaaaactcaccagatcctcttcctttttatcatctttcttcttggaatccttagaaggaatctt  14072300                                <---------ALFIN1                              ------>NtERF2                              ----------->RAV1(1)                             --------->DEAR3(1)       <-------TEIL        ------>NtERF2        <---------ARR14(2)    <---------HSFC1(2)    --------->DEAR3(1)    --------->ARR14(2)    <---------ZAT2        --------->ANAC46    --------->LBD16                                 -------    --------->ZAT2        ------->GAMYB      --------->ANAC55(2)                              <------    --------->HSFC1(2)    --------->RAP2.6(2)--------->HSFB2a(2)                              -------   <---------TOE1(2)      --------->DREB2C(2)--------->ANAC46                                 ------- --HSFC1(2)             --------->ABI4(1)    <---------HSFB2a(2)                         --------->MYB52(1) ->HSFC1(2)            --------->DEAR3(1)    <---------ANAC55(2)                       <---------ATHB12 --HSFB2a(1)           --------->AtMYB61    <---------LBD16                  ----------->RAV1(2) ->HSFB2a(1)          --------->MYB46(3)    ------>ZmHOX2a(2)                --------->ANAC55(2) >ARR14(2)          --------->ANAC46      <---------ARR14(2)                 <---------At4g35610 -KAN4(2)  --------->SPL7--------->MYB46(3)<------ZmHOX2a(2)                 --------->At4g35610    < >GLK1(2)<---------SPL7<---------ALFIN1   --------->ARR14(2)                 <---------ANAC55(2)   --   cgtcgtagcttcgtcccgcttcgcaccaccgccaacactgttcggatccggaactggagccattgtaagtcagactatcacctgatcaaatcaacgaatc  14072400                                               <---------CCA1(2)     --------->YAB1                       <---------At4g35610    --------->ICU4                        --------->HSFC1(2) -->GLK1(2)                               --------->At4g35610      --------->ARR14(2)      <---------ANAC58 ---ARR14(2)                           <---------At4g35610         <---------ARR14(2)      <---------ANAC46 -->ARR14(2)                    <---------HSFC1(2)              <---------ANAC55(2)        <---------ANAC58 >TEIL                    <---------LBD16 <---------HSFC1(2)    <---------ANAC46   <---------HSFB2a(2) ---------ATHB12  ----------->GT1 --------->GLK1(2)      <---------At4g35610       --------->HSFB2a(2) ------->ANAC46  <-------TEIL   <---------HSFB2a(1)      --------->At4g35610      <---------LBD16 <--   caaacaatgagtatcgaaattcgtaaaactcggaagaatcgagcagcttctatcttatgagctctcgcgtaaaccctaagtctctctggaatggctcgtt  14072500                                                                                      --------->ANAC58                                                                                      --------->ANAC58                                                                                      --------->ANAC46                                                                                      --------->ANAC55(1)                                                                                      --------->ANAC55(2)                                     ----------->GT1                       <---------------AtSPL8                       <---------ARR14(2)     --------->At5g28300          --------------->AtSPL8                       --------->ARR14(2)    ----------->GT1               --------->DAG2            <----------DOF2         --------->DAG2                --------->At4g35610<---------LBD16    <---------ARR11(3)<------ZmHOX2a(1) <-------TEIL  <---------AHL20(2)   <---------------AtSPL3 -------HSFB2a(2)  <---------LBD16---------->DOF2*TSS --------->AHL20(2)  ---------->DOF2        <---   agagaagaactatgcttttcttcaggaactgtagcaaaaaggttcaactgtaaaaaataaatactatcagataaaaaaaagtacttatacggaagaagat  14072600                                         <------------CBF                            ---------->CDC5                       --------->ZAT18 <---------AHL20(2)                       <---------RAP2.3(3)                       <---------ZAT18 <---------AHL20(1)                  <------------CBF     --------->AHL20(2)                  --------------------->WRI1             --------->GLK1(1)      --------->YAB1       <------ZmHOX2a(2) <---------PCF2--------->AHL20(1) --------GT1 <---------GLK1(1)<---------At4g35610   --------->ATHB12                                <   tacccctcgatcaagaattccattgtgggctcagcccataataaattgggctattcattgggccatagtattctactatggtctctatataaaacacctt  14072700                                            --------->AHL20(2)                                            <---------AHL20(1)                                        <---------AHL20(2)                                        --------->AHL20(2)                                       --------->AHL20(2)                     <------ZmHOX2a(1)                         --------->YAB1<---------AHL20(1)                 ---------->DOF2                         <---------ICU4--------->AHL20(1)         --------->YAB1          --------->ARR11(3)   <----------DOF2                   <---------ATHB12          <---------ARR11(3)<---------ALFIN1<---------AHL20(2) --------->WOX13(1) ----------DOF2      <---------AHL20(2)<---------AHL20(2)---------->DOF2  --------->MYB52(1)     <---   gtctttggcaaacatctctatatataatcaacactttaaaatttattttatttgggcgatatagccaatcacaaaataaaggactccaaaaacatctatt  14072800                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                             --------                                                                                             --------                                                                                             --------                                                                                --------->TOE2(3) <--                                                                             ----------->RAV1(1)  <--                               --------->ANAC58                        <---------ICU4        <-------       <-----------GT1         --------->ANAC46                        --------->YAB1       <-------TEIL     --------->GLK1(1)         --------->ANAC58                     --------->YAB1 <---------AHL20(2)    --------->ARR14(2)--------->AHL20(2)            <---------AHL20(2) -------->HAHB4  <---------AHL20(2)    <---------ARR14(2)<---------AHL20(2)            --------->AHL20(2)<---------YAB1   --------->AHL20(2) ------AHL20(2)      --------->AHL20(2)       ------>ZmHOX2a(2)----------->RAV1(1) --------->AHL20(2)   ttatcggatttacatttgatcaatttaaattcgaagcaactaattcgatcggatttaaattcgaacaacataataatagcaacatttatataaatacgtt  14072900          <---------DDF1         <---------ETT(2) -------ANAC55(2) ------>ANAC55(2) -------ANAC58               --------->DAG2 ->ANAC55(1)            <---------TOE1(3)                                  ---------->DOF2    <------ ->ANAC55(2)            <---------TOE2(3)                                <---------YAB1     <-------- ->ANAC46--------->ETT(2)   ---------->DOF2                         --------->ANAC55(2)     --------- -------ANAC58          <---------YAB1                              --------->ANAC46       --------->AHL20(2) -------ANAC55(1)  <----------DOF2                             --------->TOE2(3) <------ZmHOX2a(1) --ANAC55(2)     <-----------------AGL1 --------->YAB1         --------->TOE1(3)----------->GT1     <   acatgtcttagtcgacatgttcttttatggtaaagttagcaatattagtcgaactcaaacatataccttcacataatgaaagaggaaataacatttaatt  14073000  Previous    Next  AGI:  At4g28470.1    Description:  AtRPN1b/RPN1B (26S proteasome regulatory subunit S2 1B); binding. similar to AtRPN1a/RPN1A (26S proteasome regulatory subunit S2 1A), binding [Arabidopsis thaliana] (TAIR:AT2G20580.1); similar to hypothetical protein OsI_023481 [Oryza sativa (indica cultivar-group)] (GB:EAZ02249.1); similar to hypothetical protein OsJ_005215 [Oryza sativa (japonica cultivar-group)] (GB:EAZ21732.1); similar to hypothetical protein OsI_005698 [Oryza sativa (indica cultivar-group)] (GB:EAY84465.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn1 subunit (I Range:  from: 14066882    to: 14072549    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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