Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           <---------ARR11(3)                                                        --------->RVE1(1)                       <----                                                  --------->AtLEC2                              -----                                         ------->GAMYB  --------->CCA1(1)            <---------ARR14(2)                                        <---------MYB52(2)                           --------->ARR14(2)                           ------>MYB46(1)--------->MYB52(1)                     ----------------->AGL1                           ------>MYB83 <---------MYB55(2)                       ----------------->AGL3 ---->ANAC46         --------->WRKY12 ----------->RAV1(1)--------->ARR11(3)      <-----------------AGL2 ----->WRI1          --------->WRKY38(1)--------->MYB46(3)                       <-----------------AGL3   gccatacatgagactccatcacgatgaccatccattgctccaacaaacggccttgcaaatatctacagaaaaacaaaaacagagccaaatttggggactg  14064300                                                   <-----------------AGL1                                                <----------DOF2                         <---------YAB1        <---------DAG2                       --------->YAB1       <---------ALFIN1   <---------ZAT2                      <---------ATHB12     --------->ZAT18     --------->ZAT2           --------->ANAC58           ----------->RAV1(1)           <---------ZAT18       <------NtERF2            --------->ANAC58 -----At4g35610       <<<<<<<<<ARR2      --------->ZAT14       <---------At4g35610      --------->ANAC46 ---->At4g35610     --------->WOX13(1)   --------->ZAT18       --------->At4g35610     <---------LBD16   ctccataactaaacaacacagacaatcaaaattgaaactcaagagcacaccttttctaatttggcagctgtaagagctctctggtattccacggccttct  14064400                                                       <---------TOE2(3)                                       <---------HSFB2a(2)     --------->YAB1                                       --------->HSFB2a(2)<---------YAB1                            ---------->DOF2        --------->YAB1      ---------->DOF2  --------->CCA1(2)   ccataggtcgaagacttgggtcgaagttgtgaaagacccctctggaaacgaattgataatgttattgatagtctaaagctaaattttgtgatatgggaaa  14064500                              ------>ZmHOX2a(1)                          <---------ARR14(3)                   <---------ANAC55(2)                   ----------->RAV1(2)                 <-----------GT1     <----------DOF2             <---------YAB1              <---------ICU4------>ZmHOX2a(2)                  ------>ZmHOX2a(2)             --------->ICU4<------ZmHOX2a(2)                  <------ZmHOX2a(2)              --------        --------->AtLEC2  --------->ARR11(3)                 <---------ARR14(2)         <---------ANAC58      <---------GLK1(1)   --------->ARR14(3)              --------->MYB46(3)       --------->ATHB12      --------->GLK1(1)   <---------ARR14(2)           --------->MYB46(3)          <---------ICU4      --------->CCA1(2)   --------->ARR14(2)        --------->YAB1   <---------DOF5.7(2)<---------ANAC58     --------->ARR14(2)   <---------ARR11(3)<---------ANAC46 --------->ARR14(2)   <---------YAB1     <---------ARR14(2) ----------->ARR10--------->HSFB2a(2) --------->ARR11(3) --------->YAB1 <-----   cgaattggatatgcaaaaattacctgaagatcctgacttctttctcgagtgtattcatcaaccgatcttgataacgtcttaatcttcattgcttaatact  14064600                                                                    --------->ARR11(3)     <-----------HVH21                                              <---------ARR11(3)   --------->DAG2                                             --------->At4g35610  --------->DAG2                                            --------->ZAT18 ---------->DOF2       <---------LBD16                 ---------->DOF2 ->ZAT6               <---------ANAC46        <-------TEIL  <---------ZAT18   ----------->GT1 -----ID1           --------->MYB52(1)       --------->CCA1(2)<---------At4g35610                  <-   acaaaaaggtcacgacgaagactaacggggaagagagacacagagagatacagagtcaaaagtgagctaagttctccagacagaaaaaccctagatgaga  14064700                                                                              --------->ATHB51                                                                             <---------YAB1                                                                            <---------AHL20(2)                                                                            --------->AHL20(2)                                                                           --------->YAB1                                                                          <---------YAB1                 --------->ARR14(2)                                    --------->AHL20(1)                 <---------ARR14(2)       --------->AHL20(2)           --------->AHL20(2)                 --------->GLK1(2)       --------->ARR11(3)        <---------AHL20(2)               *TSS      --------->ALFIN1<---------AHL20(1)        <---------YAB1       ---------->DOF2           ----------->HVH21             --------->AHL20(1)      --------->YAB1<------------CBF           ----------->TGA1              <---------ARR11(3)    <-----------TBP--------->ATHB12         <---------At4g35610      --------->TOE2(3)          <----------DOF2<---------AHL20(1)   <---         --------->At4g35610     >>>>>>>>>MYB98     ------>ZmHOX2a(1)  <---------AHL20(1)      <----- --------ARR14(2)------->TEIL <---------MYB59      --------->TOE2(3)   <---------AHL20(2)    <-------   ggttttgggagaggtgacgaatctgagatgggcctaacttaaaaatatttagtccttaatgggctttttataatttattataattggcccaaaagttact  14064800                                                                       --------->AHL20(2)                                                                       <---------AHL20(2)                                                                    <--------ATHB1                                                                    --------->ATHB51                                                                    <---------ICU4                  <                                          ----------->HVH21         --------->AHL20(2)            <--                                         --------->LBD16            <---------AHL20(2)            ---                                        <---------ANAC58         --------->YAB1                 ----- ---------CBF       <---------TOE2(3)   <---------ANAC58        <---------AHL20(2)        <----------DOF2 ----YAB1 <---------ANAC58             <---------LBD16      <---------ZAT6             <---------ARR11(3) ----GT1  <---------ANAC58          ---------->DOF2     <--------P --------->ICU4      --------->ARR11(3)   attgcaaaacttgctcgagtttaagtttttctgttacaaaatgcgggacatttacaaggttagtgtttaataatttatcaaggagttgagttctttaaaa  14064900                           --------->ATHB51                           <---------ICU4                           --------->ATHB12                           <--------ATHB1                           -------->HAHB4                          <---------ATHB51           --------->SPL7 --------->ICU4           --------->RAP2.6(3)                                        --------->ARR11(3)       <---------------AtSPL3<---------WOX13(1)                       <---------ARR11(3) ---------YAB1            <---------AHL20(2)                      --------->LBD16 -------ICU4              --------->AHL20(2)               ------>ZmHOX2a(2) ------>YAB1<---------RAP2.6(2)             <---------AHL20(2)<---------ARR14(2)                 <--- ---->ARR11(3)            <---------ATHB12  --------->AHL20(2)--------->ARR14(2)                XXXXX   tcatgaattcgagtacggccgataacaaataattgattcaaactatttaaatctgttttgatccaatccgaagatgttattgtaaacaaaactctgaaga  14065000                                              <---------MYB52(1)       >>>>>>>>>GT-1                                             <-------GAMYB           <-------GAMYB                  <---------AtLEC2         <---------TOE2(3)        <------MYB83          --------->TOE2(3)           <---------ICU4                <------MYB46(1)          <---------MYB59             --------->YAB1<----------DOF2 ----------->GT1          --------->TOE1(3)          <---------YAB1 <---------------AGL15         <---------ANAC55(2)        <---------ARR11(3)              <---------MYB46(3) ------GLK1(1)   <-------TEIL       --------->ARR11(3)         --------->DAG2 XXXXXXXXXXXXXXX>MIR781 <----------DOF2   <---------At5g28300 ---------->DOF2   attctctggttacctaaaatgcatgactttgaatacaatatcattaccgttggacttttactagtaaagttggttaatacaagactattcttcaaatttg  14065100             <---------ANAC46         --------->GLK1(2)                 --------->AHL20(2)        --------->ARR14(2)                 <---------AHL20(2)        <---------ARR14(2)              --------->YAB1        <---------GLK1(2)              <---------YAB1        <---------ARR11(3)           --------->YAB1                                      <---------ANAC58      ----------->ARR10            <---------ANAC46     --------->AHL20(2)             <---------YAB1      --------->ICU4         <---------TOE2(3)       <----------DOF2               --------->YAB1 --------->ANAC58            <---------TOE1(3)       ------>ZmHOX2a(1)        --------->ZAT14 --------->ANAC58         <---------AHL20(2) <-----------GT1             ---------->DOF2 <---------ANAC58   gacaagtcaagattctcgtgttttgaattttaaggtttcttataattaaacagtcctttaaaatatagttgaattcaaagaacactcatatgcttgtata  14065200  Previous    Next  AGI:  At4g28450.1    Description:  transducin family protein / WD-40 repeat family protein. similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT4G02730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69791.1); similar to hypothetical protein OsJ_001021 [Oryza sativa (japonica cultivar-group)] (GB:EAZ11196.1); similar to hypothetical protein OsI_001062 [Oryza sativa (indica cultivar-group)] (GB:EAY73215.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain Sof1-like protein (InterPro:IPR007287); contains InterPr Range:  from: 14061465    to: 14064715    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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