Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              --------->HSFC1(2)                                                                            --------->HSFB2a(1)                                                            --------->At4g35610                                                       --------->ANAC58     <---------HSFB2a(1)                         <-------TEIL                  --------->ANAC58     <---------HSFC1(2)                      --------->At4g35610              ------->GAMYB       <-----------ARR10              --------->GLK1(2)                        --------->ANAC46    <---------ARR11(3)             <---------GLK1(2)                   --------->HSFB2a(2)       --------->ARR14(2)            --------->At4g35610                  <---------HSFB2a(2)       <---------ARR14(2)            <---------At4g35610                <---------At4g35610         --------->GLK1(2)          <-----------RAV1(2)                  --------->At4g35610        <---------GLK1(2) ---------ANAC46 <---------HSFB2a(2)         <---------ANAC58    --------->ANAC58 --YAB1--------->At4g35610 ------->TEIL      <---------ANAC58    --------->ANAC58<----------DOF2    -   tggagtagaagctcagatgctggaagatgcacttgagaggctcaatggcttctgcaaacgccatctcaagaaaacagaatcttcttttcaagctctgagc  14057400                                                     <---------ARR14(2)                                                     <---------ARR11(3)                                                     --------->ARR11(3)                                                     --------->GLK1(2)                                                    --------->RVE1(1)                                                --------->AHL20(2)                 --------->YAB1                                               --------->AHL20(2)     <---------ANAC46             --------->MYB46(3)              ------>MYB83             ----------->GT1   --------->bZIP60(1)           --------->ANAC46                  ------>MYB46(1)          <---------ZAT6    <---------bZIP60(1)      <-----------ARR10                    ------->GAMYB            <---------ANAC46  <---------ICU4      <---------ARR11(3)                 --------->ANAC58        <-----------RAV1(1)  --------->YAB1      --------->GLK1(2)                  --------->ANAC58    --------->ICU4        <---------ICU4 ---------->GT1  <---------ATHB12    --------->ANAC46--------->ARR14(2)           --------->ICU4   aatggcaaaatctaaaccactcatctatagagagactatacacaaccaaataaaaaatctgcaatttttgtggtgtaaaaaacaataatcatgtcatttt  14057500                                                                                             <-------                                                                                            <-------GAMYB                                                                                           <---------                                                                                           ----------                                                                                           ----------                                                                                         <---------At5g28300                                                                  --------->ICU4      <----------DOF2                                <----------DOF2                  <---------TOE2(3) <---------ARR11(3)                        --------->YAB1                          --------->YAB1  <---------DAG2                  --------->TOE2(3)                          --------->YAB1     <----------DOF2 -----   --------->ANAC46     --------->TOE2(3)           ---------->DOF2       --------->YAB1<-----------GT1   catataagaaactctatgtttcttaatcttatttctttgtttgagtcaagtagaaaaagacatgaataatgttgaatcaagactttatctttaccgttaa  14057600                     ------>NtERF2                    --------->RRTF1(2)                    <---------ATERF1(2)                    --------->DEAR3(1)                    --------->ATERF1(2)                    --------->RRTF1(3)                    --------->RAP2.3(2)                    --------->RAP2.6(2)                   --------->RAP2.3(1)                   --------->ERF1                   --------->ATERF1(1)                   <------NtERF2                   --------->RRTF1(1)                 <---------ATERF1(2)          ------>MYB83<------NtERF2          ------>MYB46(1)         <---------ALFIN1        --------->MYB46(3)      ------->TEIL------>NtERF2      <---------TCP15(1)      --------->ARR14(2)     <---------AHL20(2)      <---------ARR14(2)     --------->AHL20(2)      --------->PCF2--------->RAP2.3(3)                      <----------DOF2 --------->CCA1(2)<---------ATERF1(1)                    <----------DOF2 --MYB52(1)      --------->DEAR3(1)                   <-----------GT1                            <--- ------AGL15     --------->ATERF1(2)               <----------DOF2                              ----- ----->AGL15    <---------RAP2.6(2)         <---------ARR11(3)                       ------>ZmHOX2a(2) ->GT1<---------TCP20<-----------HVH21      --------->ARR11(3)           --------->MYB46(3)     ----- ----->DOF2 <----------DOF2 --------->AHL20(2)   ---------->ID1        --------->MYB52(1)     <------   aagagacggacccactttgccgccgtcaaatttaaaaaatgcaaaagatttgtcttttactttctttcttcatcaacggctctctgatccacagtagccg  14057700                                                                              --------->GLK1(2)                                                                              <---------ARR14(2)                                                                              --------->ARR14(2)                                                                       <---------LBD16                                      --------->LBD16            --------->AHL20(2)          <-------   --------->DAG2                 --------->GLK1(2)              --------->AHL20(1)       <----------  ---------->DOF2                 --------->ARR14(2)             <---------AHL20(2)      --------->AHL20(2) ---NtERF2             --------->ETT(1)                          <---------AHL20(1)      <---------AHL20(2) ---->LBD16       <------------CBF<---------ARR14(2)            --------->AHL20(2)------>ZmHOX2a(1) ------>GT1 <---------At4g35610  <---------GLK1(2)         --------->TOE2(3) <---------GLK1(2)    *TSS ---LBD16   --------->At4g35610<---------TOE2(3)     --------->HSFB2a(2) --------->LBD16--------->AHL20(2)   gagaaaaagcagagagctcaaattgtcggaattaagaatccccaaatcacatcttcaagaaccctaataaattcccagagattcctctcatttaatcact  14057800                                                                                                  <--                                                                                              ------>ZmHOX2a(2)                                                                                             --------             --------->ARR11(3)                                                              --------             <---------ARR11(3)                                                             <--------    ----------->GT1                                                    ------>ZmHOX2a(1)    <--------   <-------TEIL                                                        ==============================HOX2a_HOX2a --------->ARR14(2)                                                    =============================HOX2a_HOX2a <---------ARR14(2)                                             <---------ALFIN1            --------- <---------GLK1(2)  <----------DOF2                             --------->ANAC46            <-------- --ICU4   --------->DAG2                                      --------->AtMYB61             --------- -GT1    ---------->DOF2                                      <---------ALFIN1 <---------SPL7<------ZmHOX2a(2)   tcagattcgaaaaaagttctctctttttcccaaaaaaaactttctcatacaatggactctactaccacacctccttctctccgttcgaatactagatccg  14057900  <---------ANAC58  <---------ANAC46  <---------ANAC58 --------DOF2 ->CCA1(2) ->ARR14(1)                                                                                       --- -ARR14(2)                                                                            ------->GAMYB-- -ARR11(3)       ----------->RAV1(1)                          <---------AHL20(2)     --------------->AtSPL3 >AGP1          <----------ID1    <---------ARR11(3)      <------MYB46(1)          --------->MYB52(1) -GLK1(2)  --------->ANAC58       --------->ARR11(3)      <------MYB83            --------->MYB46(3)< >ARR14(2) --------->ANAC58 ----------->GT1    <---------CCA1(2)         --------->LBD16      ------>ZmHOX2a(1)   ctttgcgtctagctcgaaacaacaaaactctcgtaaaatctcacattccatctctcgatttggttttattgtctccgaagaacaacaacggtactcctta  14058000                                 ------>ZmHOX2a(1)                    <-----------GT1                           <-----------GT1                   <---------ZAT18                          <-----------GT1                      ----    ----------->RAV1(2)        ----------->RAV1(2)         <---------CCA1(2)                     ----  <---------ALFIN1 <---------ZAT14                --------->GLK1(2)                              ---- ------>MYB46(3)   --------->ZAT14 <---------MYB52(1)   <----------DOF2                        ------ ------->ANAC46  <---------At4g35610             <---------GLK1(2)     <---------ALFIN1 --------->GLK1(2) -----------HVH21--------->At4g35610           ----------->ARR10  ------>ZmHOX2a(1) <---------HSFB2a(2)   cccatcacctgtttctctcagttcaccatcttctcctgttactcttcgtgagattctccttttatctccttcccctcttcgtaaatcgagaacccgttta  14058100                                           --------->MYB52(1)                                          --------->ANAC58                                          --------->ANAC58                                          ----------->HVH21                                     <---------ATERF1(2)                                  ----------->HVH21                              <---------At4g35610                              --------->At4g35610                              <---------ZAT2                              <---------ZAT14                                                  ------                              --------->ZAT2                                                   ------                           --------->ATERF1(1)                                                -------                           <---------At4g35610                                               --------                          <---------ATERF1(1)                                                <------NtERF2                       --------->LBD16 <------NtERF2                                        ------>NtERF2                      <---------ANAC46------>NtERF2                                        --------->DEAR3(1)                     --------->At4g35610 --------->SPL7                                   <------NtERF2                     <---------LBD16 --------->bZIP60(1)                                  --------->ATERF1(1)                  <---------ZAT2  ----------->TGA1                                       ------>NtERF2                  --------->HSFB2a(1)<---------bZIP60(1)                                 <---------ATERF1(1)                  --------->ZAT2 <-----------HVH21                                       <-----------HVH21                  --------->HSFC1(2) --------->ANAC58                                   <---------DEAR3(1) ----->ANAC58     <---------HSFC1(2)--------->RAP2.6(3)                                 --------->DEAR3(1) ----->ANAC46     <---------HSFB2a(1)--------->ATERF1(2)                            <------NtERF2 <-- ----->ANAC58     <---------At4g35610<---------RAP2.3(3)                    <----------DOF2<---------DEAR3(1) ---->DOF2        --------->At4g35610--------->ANAC58           ----------->GT1     --------->ATERF1(1)   agcaatcggttcgatatggaagctgcggaggctgctgtgacggcacgacggagtaagacgaagggagggcaaaatggtcttttggcctcgccgtcgccga  14058200      --------->LBD16     --------->HSFB2a(2)     <---------HSFB2a(2)    <---------LBD16  <---------ARR14(2)  --------->ARR14(2)                <--------P <---------GLK1(1)               <---------AtMYB61    --------->ANAC46 --------->GLK1(1)           <------NtERF2            <---------ANAC55(2) <---------HSFB2a(1)       <---------DEAR3(1)      <---------ARR14(2)             ---------->DOF2 >NtERF2<---------AtMYB61 --------->ATERF1(1)      --------->ARR14(2) <---------ANAC46 --->LBD16                <------NtERF2       ----------->GT1         <---------ANAC58 -->DEAR3(1)            <---------DEAR3(1) ---------->DOF2      <-----------RAV1(1) ----------->GT1 ->ATERF1(1)          <-----------HVH21  <-------TEIL<---------LBD16  <---------ANAC58<----------ID1 ----ZmHOX2a(1)     <---------TOE2(3)   --------->CCA1(2) ------>NtERF2 ----------->HVH21           <   ggaatttccggaggtcgagactaaggtcggaggcgatggtagatacaaaggaaaatacggagccaattgttgtcgtgaccgatgaaaagaaacaaaacca  14058300  Previous    Next  AGI:  At4g28430.1    Description:  reticulon family protein. similar to reticulon family protein [Arabidopsis thaliana] (TAIR:AT2G20590.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69787.1); contains InterPro domain Reticulon; (InterPro:IPR003388) Range:  from: 14057798    to: 14059870    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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