Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        ------->TEIL                   --------->ANAC46                   --------->ANAC55(1)                   --------->ANAC55(2)                                 <---------ANAC58                   --------->ANAC58                                    <---------ANAC58                   --------->ANAC58                                    --------->ANAC55(2)       <---------ARR14(2)                                              <---------ANAC55(2)       --------->ARR14(2)                                             <---------TOE1(2)       <---------ARR11(1)                                             <---------TOE2(2)       --------->GLK1(2)<----------DOF2                              <-----------GT1 --->DAG2  ------>ZmHOX2a(1)                               <---------YAB1 ----TOE2(3)      --------------->AtSPL3 <-----------HVH21--------->TOE2(3) <-----------GT1   gctagtccgaatccttcttacacgtactttgaaaaaaaaaacttgtcatttgtaaggcatcatcaatattcttacgtttcacaattcatcttcttctaat  14055300                                   --------->TOE1(3)                                   --------->TOE2(3)                                  ----------->GT1                               --------->WOX13(1)                     --------->MYB52(1)          <---------ANAC58       ------->TEIL                    --------->MYB46(3)           <---------ANAC58    --------->ANAC58            ----             <---------ARR14(2)   --------->ANAC46                   --------->AtLEC2            <---             --------->ARR14(2) <-----------GT1 ---------->ID1       --------->ANAC58        <-------      --------->ATHB12<---------LBD16      <----------DOF2       <-----------HVH21 --------->YAB1<--- <---------YAB1    --------->SPL7<---------TOE1(3)      <----------DOF2<---------ALFIN1 <----------DOF2   attatgtttcattggaatccgaacgacggaaatttcacgttaaaacttttggcttcttcttttttttggtcacgcacatcatctatcatactttagtatt  14055400                                            --------->AtLEC2                                        <-----------HVH21                                      <---------YAB1                                    -------->HAHB4                                    --------->YAB1                                   <---------ATHB51                                   --------->ICU4                                --------->AHL20(1)                                <---------AHL20(1)                       <---------YAB1                                <---------AHL20(2)                      <---------ARR11(3)                                --------->AHL20(2)                    <---------YAB1                            --------->ICU4  --------->ANAC58        <---------ICU4    --------->AtLEC2       --------->At5g28300                      --------->YAB1   ---------->DOF2 ----->ARR11(3)            <---------RAP2.6(3) ------->TEIL        <---------YAB1 --------->AtLEC2 --------GT1              ----------->GT1   --------->ANAC58   <----------DOF2   --------->WOX13(1) --ZAT6---------->DOF2    --------->RAP2.6(2) <---------ALFIN1 <---------DAG2 <-----------TGA1 ------ARR11(3)      ---------->DOF2<---------ICU4        --------->YAB1--------->ARR11(3)   atcttcattcaaagtctgtaattcaaagccgtaattaattatggtcacgcacatcatatatcatactttattattatcttcgtcattcaaagtctataac  14055500                      <---------SPL7                     <---------ANAC58                     <---------ANAC46                                      ---------->DOF2                     <---------ANAC58                                     --------->TOE1(2)                     --------->ANAC55(2)                                 --------->MYB46(3)  <-------               --------->GLK1(2)                                        ------->TEIL  <------------CBF           <-----------GT1----------->HVH21                        <---------AtLEC2   <---------MYB52(1)      <---------YAB1--------------->AtSPL3                       --------->AtLEC2   <---------YAB1   --------->ZAT14 <---------TGA2(2)            ----------->HVH21<---------YAB1 --------->GLK1(1)   <---------ZAT14----------->HVH21 ---------->DOF2            --------->YAB1   <---------GLK1(1)   ttcagtttactattgacaatctgacgtactgacatagacaaagtctacgcttgacaattttagaatcatgcatgaaccaaagagttccgattgttttact  14055600                     <---------WRKY18(1)                    --------->WRKY38(1)                    --------->WRKY12               <----------DOF2                                                       --------->YAB1             <---------YAB1                                                     <---------AHL20(1)            --------->AHL20(1)                                                  --------->AHL20(2)            --------->ARR11(3)                                                  <---------ARR11(3)            <---------ARR11(3)                                                  <---------AHL20(2)            <---------AHL20(1)                        ------------>CBF          --------->ARR11(3)           --------->RVE1(1)                     <---------TOE2(3)              --------->AHL20(1)---       ----------->TBP                    ----------->RAV1(1)              --------->MYB46(3)  ------       --------->AHL20(2)                --------->ANAC46             --------->ANAC46        ------- ----GT1   --------->CCA1(1)           --------->ANAC46             *TSS --------->MYB52(1)  ------->TEIL   tcttcatctataaatatctttgttgacctctcttcatataaacacaacatttagatttcaatagctacttactcccaacgaatatattcacaatgaacca  14055700                                                                             --------->LBD16         --------->TOE2(1)                                                  <---------LBD16         --------->TOE1(1)                                               <-----------HVH21     -------->P                          --------->ANAC58             <---------ANAC58           ----  --------->At4g35610                    --------->ANAC58             <---------ANAC58       -------- ------->GAMYB                           --------->ANAC46             <---------ANAC46     ------->GAMYB -------->RAV1(1)                     --------->DEAR3(1)             ---------->ID1 ----------->HVH21 --->AtMYB61                       --------->ANAC58      --------->GLK1(1) <-----------RAV1(2)------>NtERF2 -->MYB46(3)                       --------->ANAC58      <---------GLK1(1) <---------LBD16--------->ANAC46   caacagcaacctcgttcttccttcccatcaaaccgagacgcagacgcaagatgaaaccgatatcagcgtttggcgtttcaggggaagcgacaacgcagcc  14055800                                               ------->TEIL                                    <---------ARR11(3)         <-----------HVH21          --------->ARR11(3)                       <---------At5g28300         <-----------TGA1         --------->ANAC58                       <----------DOF2    --------- ------>DOF2                      --------->ANAC58         ----------->GT1  <-----------GT1 --------- ->RAP2.3(3) --------->ICU4    <---------REM1(2)    ------>NtERF2---------->DOF2           --------->At5g28300   aaagcctccagcgtcacgatgagagtcatcgtctacaagctcttcgatgaatgcagcctggatgtgaaaaagcctcttttaccccttgctcacggtgacc  14055900                                                                                                  <--                                                                                                  ---                                                                                                <----                                                                                              -------                                                                                              -------                                                                                              -------                                                                                             <------NtERF2                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                            <--------                                                                                            ------>NtERF2                                                                                            ---------                                                                                           --------->RRTF1(3)                                                                                           --------->ATERF1(2)                                                                                           --------->RAP2.3(2)                                                                                           --------->RAP2.3(3)                                                                                           <---------ATERF1(2)                                                                                           --------->RRTF1(2)                                                                                           --------->DEAR3(1)                                                                                           <---------DEAR3(1)                                                                                          --------->ORA47(2)                                                                                          --------->ATERF1(1)                                                                                          <------NtERF2                                                                                          --------->RRTF1(1)                                                                                          --------->RAP2.3(1)                                                                                          --------->ERF1                                                                                          --------->DEAR4(2)                                                                                          --------->RAP2.6(1)                                                                                         ------>NtERF2                                                                                         --------->LBD16                                                                                         <---------ATERF1(1)                                                                                         --------->ABI4(1)                                                                                        <---------ALFIN1                                                                                        --------->DEAR3(1)                                                 <---------WRKY12                       --------->ANAC46                                                 <---------ETT(2)                      <------NtERF2                                                 <---------WRKY38(1)                   <---------ABI4(2)                                                 --------->ETT(2)                      --------->MYB46(3)                                              <---------MYB46(3)                       --------->ATERF1(1)                                             --------->ALFIN1                          <---------LBD16                                            --------->LBD16                            --------->RAP2.3(1)                   <---------ALFIN1        --------->DEAR3(1)                         <---------ATERF1(1)                  <---------ZAT18       --------->ANAC58         --------->LBD16     --------->PCF5      -------->P--------------->AtSPL3  --------->ANAC58         ------>NtERF2       --------->PCF2    <---------ETT(2)     <---------ALFIN1  <---------ANAC46     <---------ETT(1)     <---------TCP20    --------->ETT(2)------->TEIL   --------->HSFB2a(2)         <---------LBD16   --------->SPL7------ -->HVH21      <---------At5g28300 <---------HSFB2a(2)   ------>ZmHOX2a(1)       --------->RAP2.6(3) >WRKY38(1)   <-----------GT1 ------>ZmHOX2a(1)  <---------DEAR3(1)    ----------->GT1------>NtERF2   cttctgtctacccttgttaccgcacctccatcctcgtcgagaacgccgtggtcgacgtccttcgctccggcaagggtaactcttacggccccgccgccgg  14056000      --------->ANAC46 -------GLK1(1) ------>GLK1(1) --NtERF2 -->LBD16                                                           ------>MYB46(1) -->RAP2.3(2)                                                      <---------ALFIN1               --- -->RAP2.6(2)                                                     <---------MYB55(2)            ----- --LBD16                                             <-----------GT1------>MYB83                ----- ->RAP2.3(1)                              --------->ZAT14         --------->MYB46(3)    --------->YAB1 ->ATERF1(1)                --------->AHL20(1)       <---------AHL20(2)               --------->AtLEC2 -ATERF1(1)                 <---------AHL20(1)    <---------ICU4 --------->ANAC46  --------->MYB46(3) >ABI4(1)      --------->At5g28300       <---------DAG2        <---------ALFIN1  <-----------GT1----- --->LBD16    ----------->GT1            <----------DOF2<----------DOF2--------->At5g28300    <------   aattctcccagccagacagtaatatactaatatttttctcttactttactcttaattactttgttccacccactgtaagtctgtaaccattcaaaaccta  14056100                                            --------->ANAC55(2)                                            <---------ANAC46                                            <---------ANAC58                                            <---------ANAC55(2)                                       <---------At4g35610                                       --------->At4g35610                                      <---------TOE1(2)                                 <-----------HVH21                                 <-------GAMYB                                <---------ATERF1(1)                                <---------SPL7                                <---------DEAR3(2)                                <---------MYB46(3)                                                  -       <---------AtLEC2        <---------DREB2C(2)                                                  <  --------->ARR14(2)           <---------DEAR3(1)                                                 --- ------>ZAT6                   <---------RAP2.6(2)                                                <-- ->MYB83                      <---------ZAT18    ------->TEIL                                  ------ ->MYB46(1)               <---------ICU4    <---------ANAC58                    --------->ICU4 <----- ---->MYB52(1)         --------->WOX13(1)   <---------ANAC55(1)        ---------->DOF2   --------->YAB1 ---MYB59          ----------->GT1    <---------TOE2(2)   ----------->HVH21     <---------ATHB12<----   acagtattttcatggaatgttttgttaatcagggcggtcgcagattacgtgaaccgagacttgacgaacaaggtaaagcctaatgatgtattcataactg  14056200  Previous    Next  AGI:  At4g28420.1    Description:  aminotransferase, putative. similar to SUR1 (SUPERROOT 1), transaminase [Arabidopsis thaliana] (TAIR:AT2G20610.1); similar to SUR1 (SUPERROOT 1), transaminase [Arabidopsis thaliana] (TAIR:AT2G20610.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO69786.1); contains InterPro domain Aminotransferase, class I and II; (InterPro:IPR004839); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region (InterPro:IPR015424); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region, subdomain 1; (InterPro:IPR015421); contains InterPro domain 1-aminocyclopropane-1-carboxylate synthase; (InterPro Range:  from: 14055668    to: 14057180    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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