Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          <-------MYC3                                                                     <---------AtLEC2                                                                     <---------ANAC58                                                                --------->ALFIN1                                                                <-----------RAV1(1)                                                              <---------ANAC46                                                              <---------ANAC58                                                              <---------bZIP60(2)                                                              <---------ANAC58                                                           --------->ALFIN1                                                         <---------ANAC58                                                         --------->ALFIN1    --------->TOE1(2)                                    <---------ANAC58    --------->TOE2(2)                                    <---------ANAC46<-----------RAV1(1)   ----------->RAV1(2)                                 <---------ANAC58 ------->MYC2 <---------ARR14(2)                               ==========================RAV                    -- --------->ARR14(2)                               <-----------RAV1(2)<---------ANAC46         <------ ------ZmHOX2a(1)                               <-----------HVH21    <---------ANAC58         ------- -->DAG2                           <-----------HVH21   <---------ANAC46 ------->MYC3      <---------- -->DOF2            <------ZmHOX2a(1) ----------->HVH21<---------ANAC58 <-------MYC2   --------->ZAT14   taggaacctgagtggctaagtaggaagagagagtctccgtctgagagggaagtcagggggtgtgtcgtgttgcatgtgttgtactcttgttcagtcacct  14033400                               --------->ARR11(3)                      <---------SPL7                      <---------ZAT18      <---------GLK1(2)        <---------ARR11(3) <---------ALFIN1    <---------ANAC46                           <---------ICU4 --------->ZAT6      <---------ANAC58                         <---------TOE2(3) --------->RAV1(1)   <---------ANAC58   --------->ICU4        <---------YAB1 ---At4g35610       --------------->AtSPL3     <---------ICU4--------->AHL20(2) -->At4g35610       --------------->AtSPL8  --------->YAB1   --------->YAB1                      <--- -HVH21------->TEIL ---------->ID1 ----------->GT1<-----------GT1           <---------ANAC46   ------   ccaacactgaatcttttcccttggcgtacttaaaatcttgtaaaaatcaaaattactatgcattaatattgacacattgtgtatatatagtagagaagag  14033500                                                                                     ------->GAMYB                                                                                    <---------ATHB12                                                                                    --------->MYB46(3)                                                                                   ------>MYB83                                                                                   -------->P                                                                                   ------>MYB46(1)                                                                                  ------>MYB83                                                                                  ------>MYB46(1)                      --------->WRKY45                         <---------LBD16  --------->MYB46(3)                      --------->WRKY38(1)           --------->YAB1              <---------MYB59    --                      --------->WRKY12             <---------ATHB12            --------->ANAC58    --                     --------->DOF5.7(2) <-----------HVH21--------->YAB1       --------->ANAC58   ---                    <-------GAMYB      <---------ANAC46  <---------KAN4(1)    --------->PCF2     ----                   <---------MYB46(3) <---------------------WRI1      <------ZmHOX2a(1)         ----- ---ZmHOX2a(1)     <---------ANAC46 <---------ARR14(2)   --------->KAN4(1)  <------NtERF2     ------- ----->GT1      --------->ALFIN1    --------->ARR14(2)  <---------KAN4(2)--------->ALFIN1<----------DOF2   gaaatagacttacgaagagtgtcgttgacttgaaaccggtttcggtgagaccaatgagaataatcttcggaaggagtcgggacccaaccatctttcccac  14033600                                                                    <------ZmHOX2a(2)                                                                   <---------ARR11(3)     --------->ARR11(3)                                            --------->ARR11(3) ---->MYB46(1)                                                   --------->ICU4                ------ ---->MYB83 <-----------GT1                                    ---------->DOF2      ------>MYB46(1) -------->RAV1(1)                             <---------ICU4----------->GT1         ------>MYB83 ----->AtMYB61                            <---------ATHB12 --------->DAG2         <---------MYB59 ---->MYB46(3)                  --------->TOE2(3)          <---------TOE2(3)      --------->AtMYB61 -->ANAC46 <---------CCA1(2)    --------->TOE1(3)      --------->YAB1         XXXXXXXXXXXXXXXXXXXX>MIR842   caacatagaacttgtatccatttgatatcgtaaaccctaaacccatcaacatcacaaacataaggtaaagatcaaacctcatgaccaaacccatctccga  14033700        --------->WOX13(1)                       <---------ANAC58      --------->DOF5.7(2)                        <---------ANAC58      <---------MYB52(1)                         --------->ALFIN1                   <---------ANAC58     --------->TOE1(3)                       <---------ANAC58                       <---------ANAC58     --------->TOE2(3)                       <---------ANAC58                      <-------TEIL    ----------->GT1         <------------MYB.PH3(2)                      --------->TOE1(3) --->At4g35610     <---------ALFIN1<----------DOF2                       --------->TOE2(3)       ----   tgcaaaacgttaatcaaaccccaacttcttactaactcttttgaagtgagtgtgtgtgtgtgtgtgtgtttgcaacctcaagaggtgcttatttatggtg  14033800                             <----------DOF2                             <---------DAG2                       --------->WRKY18(1)                     <------MYB83                     <------MYB46(1)                    --------->MYB59                   ---------->DOF2                    --------->MYB46(2)              <---------MYB59                   <---------MYB55(1)               --------->TOE2(3)                  <---------MYB52(1)          *TSS <---------ANAC55(2)                         ------  ---------->DOF2<---------RAP2.6(3)      <---------AtLEC2 <---------GLK1(1)                 -------- ------>DOF2     <-----------HVH21   <---------DEAR3(1)    --------->CCA1(2)       <---------AtMYB61   aaagtaaagaaaacatagccgttaggtcaagctttttgggctgtgcatcgattacctaaagaaatgcgaattaagtagaagcgttttggttttgctcctg  14033900           <---------TGA1a           --------->O2           --------->ANAC46           <---------O2                                                                          ----           --------->TGA1a <---------ZAT14                                                     ------           --------->ANAC58<---------ZAT18       --------->AHL20(2)                           <------ZmHOX2a(2)           ===============================================bZIP_DOF                           --------           <---------ANAC55(2)                   <---------AHL20(2)                          --------           --------->ANAC55(2)                 <----------DOF2                               --------           --------->ANAC55(1)    --------->RAP2.6(3)                                        <-------           ==========================================MYC_MYB                                 <-------           --------->ANAC58--------->ZAT14    --------->TOE2(3)                              <-------  <----------DOF2        <---------At4g35610------->TEIL        <----------DOF2              <-------  ===================bZIP_DOF    --------->MYB52(1)         <----------DOF2                 <-------- >ZmHOX2a(1)            <---------ANAC46    -------->P <-----------GT1                     ---------- --->RAV1(2)         --------->AtLEC2  --------->GLK1(1) <-----------GT1       <---------ICU4--------   tcttcttttgaacacgtctcgacatgcagtggacttaacggctatctacctttaatttttcactttctttctcacaaacaaacatttctcactcagatct  14034000   --------->ATHB51   --------->AHL20(2)   <---------ICU4   <---------AHL20(2)  <---------YAB1  --------->ICU4 ------->GT1 >ZmHOX2a(2) ->ARR11(3)                                     <---------YAB1     <---------ANAC55(2) ->ARR14(3)                                   <---------ICU4  <---------ANAC58 ->AGP1                                       --------->YAB1  <---------ANAC58 --AGP1                                      <---------YAB1   --------->ANAC55(2) --ARR14(3)                        <---------MYB52(1)         <---------ANAC55(2) --ARR11(3)                       ------>ZmHOX2a(1)  <---------AHL20(2) --ARR14(2)               --------->YAB1   <---------AHL20(2) --------->ANAC46 -CCA1(2)             <---------AHL20(2)  --------->ICU4   --------->TOE2(2)<---------AHL20(2)<------ ->ARR10             --------->AHL20(2)   --------->AHL20(2) <---------TOE2(3)   <---------AHL20(2) ->ARR14(2)       --------->YAB1  <----------DOF2--------->AHL20(2)--------->ANAC55(2) <-----------GT1   tgtaattatttagccatcaaatataaaattgtaatcctttagtatttattattatttaaaacttacgttacatattgttttattttatatttcaatttac  14034100                                            <----------DOF2                             <---------AHL20(2)         --------->ARR11(3) --------->AHL20(2)                         ---------->DOF2        --------->CCA1(1)   <---------AHL20(1)                   ----------->GT1        --------->RVE1(1)--------->YAB1<---------ZAT18    <---------ANAC46                          < ----------->GT1        <---------ATHB51 <---------PCF2   <---------ANAC58                         -- -----GT1<---------ARR11(3) <---------AHL20(2)            <---------ANAC58   <----------DOF2  ------>ZmHOX2a(1)   aaatcgataaatatcccagtgatacaataataaaattttagtgggcctttcaaatggattgggtatgttgtaagaaaggctttgcagtttcttctcctct  14034200                                             <---------ANAC58                                             <---------ANAC46                                             <---------ANAC58                                         <---------WOX13(1)                                        >>>>>>>>>ARR2                                       --------->ATHB12                                      <---------YAB1                                        <--------             <---------------AGL15------>ZmHOX2a(1)                  --------->GLK1(2) <-----------GT1             --------------->AGL15<----------DOF2                --------->ANAC46   <---------AHL20(2)   ---------->DOF2                <---------DAG2                --------->ZAT18    <---------AHL20(2) ----------DOF2<---------YAB1 <---------ARR14(2)            --------------->AtSPL8 --------->AHL20(2) ------->TOE2(3)              --------->ARR14(2)        --------->ANAC46       ------>ZmHOX2a(1)   --   acctttaaagcccaactattagtagaagactgaatcctttttgattgtcttgtagtttacacaatgtacacaatctttctcctaattttatactctttct  14034300  Previous    Next  AGI:  At4g28365.1    Description:  plastocyanin-like domain-containing protein. similar to plastocyanin-like domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G32490.1); similar to unknown [Populus trichocarpa] (GB:ABK95044.1); contains InterPro domain Cupredoxin (InterPro:IPR008972); contains InterPro domain Plastocyanin-like; (InterPro:IPR003245) Range:  from: 14032851    to: 14033846    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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