Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   <-----------GT1                                       <---------ANAC58                                      --------------->AtSPL3                         --------->AtMYB61   <----------DOF2                        --------->ANAC46 <---------MYB52(1)        <----------DOF2                 <---------YAB1    <---------GLK1(1)              <---------ANAC58    ------->GAMYB      ---------->DOF2 --------->ANAC46--------------->AtSPL8      <---------ANAC58    --------->TOE2(3) --------->AHL20(2)  --------->MYB46(3)<---------ANAC58 --------->TOE2(3)            --------->MYB46(3) --->ANAC46  <---------ANAC58      --------->GLK1(1)    --------->TOE1(3)<----------DOF2            < --ALFIN1    <---------ANAC58XXXXXXXXXXXXXXXXXXXXX>MIR777     <----------DOF2<---------YAB1   <------   catttacataaagaggcttatcatccaccacaaactgagttccgttccttttcacaaaccctaactttgctttccctttgtgattcaaccacaaatctcg  14019900                                                                                              <------                                                                                             <-------                                                                                          ------>ZmHOX2a(1)                                                                    <---------PCF2      ----------->RAV1(2)                                                             <---------ANAC46         --------->AtMYB61                                                             <---------ANAC58         <---------ALFIN1                <---------At4g35610                          <---------ANAC58        --------->bZIP60(2)   <---------WOX13(1)                                 <---------ANAC58              ------>NtERF2 --------->ATHB12                                     <---------ANAC58        <---------At4g35610 ---------YAB1  --------->At4g35610           <---------TOE1(2)  <---------ANAC46  <---------ALFIN1 ---HSFB2a(2)---------->DOF2       --------->TOE1(2)  <---------ANAC46        --------->At4g35610   aaatgatagatagatgaaagctgcacatataaaaaaacctagaattcgtagcattggcctgttccttgtgggaaccatgcttctgccacctcctgcttca  14020000                                                                         <---------HSFB2a(2)                                                                         --------->HSFB2a(2)                                                                     <---------ALFIN1                                                                  <---------ZAT18                                                                --------->ATERF1(1)                                                               <---------ATERF1(1)                                                               <---------DEAR3(2)                                                               <------MYB46(1)                                                               <---------ORA47(2)                   -                                                               <------MYB83                        <-                                                              <---------DREB2C(2)                  --                                                              <---------DEAR3(1)                   <-                                                     <---------DAG2--------->ATERF1(1)             <-                                                <---------GLK1(1) --------->ABI4(2)                --                                               <---------ARR11(3) ------>NtERF2             <--------                                               --------->ARR11(3) --------->PCF2  --------->DAG2   <-                                           ---------->DOF2    <---------MYB46(3) ---------->DOF2   <- ---ZAT14                          <---------GLK1(2) <----------DOF2--------->MYB46(3)      <-------- ---DOF2                         --------->LBD16--------->GLK1(1) <---------ATERF1(1)       <--------   ctgcttcacacacacacacacagaaatttcaaacccagaattggagaaagagctccttttttagtcggtgcccacccagaagaaaaagtctgtgccttgt  14020100 <---------MYB52(1) -------->LBD16 --------ANAC55(2) --------->GT1 --------ANAC58 --------ANAC46                                     <---------ATHB12        --------->CCA1(2) ------->ANAC55(2)                                --------->WOX13(1)       --------->ARR11(1) -ANAC58                                --------->ANAC58                   <---------ARR11(3) --------ANAC55(1)                    --------->MYB52(1)                 ----------->ARR10 --------ANAC58            --------->YAB1----------->GT1                 --------->ICU4   <---------ZAT18 -ANAC46                <----------DOF2 --------->ANAC58   --------->HSFB2a(2)    --------->AHL20(2) -ANAC58            <---------ALFIN1<-----------RAV1(2)    <---------HSFB2a(2)----------->GT1   tccgtgaatttctctgaaacccaaaccttttataaaacccagacggaaaaatcaatcgtttgtagaaaattagcaaagatttgaaaaaatagctcgctca  14020200                                   --------->At4g35610                   <----------DOF2                               --------->ANAC58                       ------->TEIL                               --------->ANAC58                      <---------CCA1(2)                       --------->ARR14(1)                       ------>ZmHOX2a(2)                       --------->CCA1(2)                       <------ZmHOX2a(2)                      --------->ARR11(1)                      --------->ARR14(2)                      --------->ARR14(2)                      --------->ARR11(3)                      <---------ARR14(2)                      <---------AGP1                    ----------->ARR10      --------->AHL20(2) <---------ARR14(2)               --------->MYB52(1)--------->YAB1               <---------ARR11(3)        --------->ANAC58     ---------->DOF2    <---------ICU4<-----------ARR10  --------->AHL20(2)        --------->ANAC58<-------TEIL   --------->ARR11(3)*TSS<---------CCA1(2)   <---------AHL20(2)    <----------DOF2<---------------------WRI1   --------->YAB1--------->AGP1   <-----------TBP   ataacgctttaagcaaacaagggagatacgaacaagcagaagaaattgaataatcacagacacagatctatgtatctttgtatttatattagttgtttat  14020300                                                                             --------->AHL20(2)                                                                          --------->YAB1                                                                        --------->AHL20(2)                                                                  <-----------GT1                                                              <---------AHL20(2)                                                              --------->AHL20(2)                 <---------ARR14(2)                          <---------AHL20(1)           --------->AHL20(2)                 --------->ARR14(2)                          <---------AHL20(2) --------->AHL20(1)                 ------->TEIL                                --------->AHL20(2) <---------AHL20(1)                <---------CCA1(2)        <-----------GT1  <---------AHL20(2) --------->YAB1           <-----------GT1      <------ZmHOX2a(1)        <---------AHL20(2)--------->AHL20(2)     <---------AHL20(2)     ---------->DOF2              --------->AHL20(2)--------->AHL20(1)   <----   tagttatttagtttcactgtatctgaaacttaaaggacccaaattactatatttttctattaatttttttacaaaaaaataatatttttctattaattct  14020400                                                                  --------->ANAC58                         <---------ANAC58                    <----------ID1                     <----                         <---------ANAC46                  --------->DAG2                      ------                ----------->GT1                          ---------->DOF2                       ------    <----------DOF2      <---------ANAC58       <-----------GT1   --------->ANAC58             <----- -----YAB1 ---------->DOF2            <----------DOF2--------->AtLEC2                         -------   aattttcttttgtgaaagaagaaaatagcttgaaatagcccttttgtattttaccttgcaaaagggacaaggcataatgtgatgttttaaaaaaaaaaaa  14020500                                           <---------ANAC55(2)                              <---------MYB52(1)     --------->ARR14(2)              --------->AHL20(2)     --------->ANAC58       <---------ANAC55(2)      --------->ARR11(3)              <---------AHL20(2)     --------->ANAC58       <---------ANAC58         <---------ARR11(3)           --------->AHL20(2) -----ICU4<---------YAB1    <---------ANAC58        --------->RVE1(1)        <---------YAB1 --->AHL20(1)               <---------ANAC46    --------->AHL20(2)         --------->YAB1 --->AHL20(2)       --------->ANAC46       <---------ANAC46            <---------RVE1(1) ----AHL20(2)     --------->ZAT6         --------->AHL20(2)   --------->AHL20(2) --------->AHL20(2) -->AHL20(2)    <-----------GT1 --------->MYB52(2)  --------->CCA1(1)  <---------CCA1(1)  --------->ATHB12   attacacaaggtatgattttacactctatttcgtaagttgaaattacttataaaatatcttcataaaaattggatatttataaataaaaaaatggttgaa  14020600                       ---------->DOF2                      --------->AtMYB61                    ------>MYB83<------ZmHOX2a(1)                                                   -                    ------>MYB46(1)                                                                 -                  <---------MYB55(2)        <------ZmHOX2a(1)                                       <                  --------->MYB46(3)--------->DAG2                                           <-------               <---------WRKY18(1) ---------->DOF2           <---------TOE2(3)         <-----------RAV1(1)          --------->ARR11(3)   <----------ID1      ----------->RAV1(2)                --------->ARR11(3) ---------->DOF2--------->PCF2----------->GT1    <-----------GT1          ---------->DOF2 <---------MYB46(3)   ggggaaagaacagaacttgacccaccaaagaagaggaaaaagcacaggaattaacctggtatttagatttagaactaaaagagactaatatgttgttgga  14020700                                                                                         <---------ANAC58                                                                                         <---------ANAC58                                                                                      ------->MYC2                <---------AHL20(2)                                                    <-------MYC2                --------->AHL20(2)                                                    ------->MYC3               --------->AHL20(2)                                                     <-------MYC3    ---------->DOF2                                                                ----------->RAV1(1) -------->TOE1(3)                              <-------TEIL                     <---------PCF5 <----- -------->TOE2(3)                         --------->AHL20(2)             --------->AHL20(2)    <----- ----------DOF2<---------AHL20(2)    <------ZmHOX2a(1)          <------ZmHOX2a(1)  <---------ALFIN1 --------------WRI1   <---------YAB1----------->GT1    ------->TEIL  --------->AHL20(2) <-------TEIL   aactttaaaagaaggaatttaattttgatgagtatcacaggaaaaaaaatacatttgaatctcttaggaaaaaaaataaacagggccacatgcgttggag  14020800  Previous    Next  AGI:  At4g28320.1    Description:  glycosyl hydrolase family 5 protein / cellulase family protein. Identical to Mannan endo-1,4-beta-mannosidase 5 precursor (MAN5) [Arabidopsis Thaliana] (GB:Q9M0H6); similar to glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] (TAIR:AT2G20680.1); similar to unknown [Populus trichocarpa] (GB:ABK95966.1); contains InterPro domain Glycoside hydrolase, family 5; (InterPro:IPR001547); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 14018189    to: 14020257    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version